Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0727
         (548 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118519-1|AAM49888.1|  104|Drosophila melanogaster LD16736p pro...    32   0.44 
AE014134-756|AAN10358.4| 23015|Drosophila melanogaster CG33196-P...    29   5.5  

>AY118519-1|AAM49888.1|  104|Drosophila melanogaster LD16736p
           protein.
          Length = 104

 Score = 32.3 bits (70), Expect = 0.44
 Identities = 21/54 (38%), Positives = 24/54 (44%)
 Frame = -1

Query: 191 SNKSCKLHLHQVKLHKRDNKHTFQRVWRDAQCS*GKQVVAVCMDFFHSSLYHIP 30
           S KSC LH       K D+ HT    +R A C  G+Q V    D  HS    IP
Sbjct: 19  SGKSCLLHHFIESKFKDDSSHTIGVEFRLADCERGRQ-VGKATDMGHSRSGEIP 71


>AE014134-756|AAN10358.4| 23015|Drosophila melanogaster CG33196-PB
             protein.
          Length = 23015

 Score = 28.7 bits (61), Expect = 5.5
 Identities = 16/61 (26%), Positives = 24/61 (39%)
 Frame = +2

Query: 59    NPCIQPPLVCPKNTEHRARHAGKCACCPACVTLLGEGATCKIYSKELGETPSAVCKXPLK 238
             +PC+  P  C  N+E R   A + A C      +G    C+       E P  +    L+
Sbjct: 10490 DPCVPSP--CGPNSECRVSAANEQAVCSCLQHYVGRAPNCRPECTSDSECPGNLACINLR 10547

Query: 239   C 241
             C
Sbjct: 10548 C 10548



 Score = 28.7 bits (61), Expect = 5.5
 Identities = 21/66 (31%), Positives = 27/66 (40%)
 Frame = +2

Query: 44    DYCEKNPCIQPPLVCPKNTEHRARHAGKCACCPACVTLLGEGATCKIYSKELGETPSAVC 223
             D   ++PC   P  C  N+E RA  AG+ A C      +G    CK       E PS + 
Sbjct: 15295 DIVPQDPCRPSP--CGPNSECRA--AGETATCTCLGDFVGSPPYCKPECVANSECPSNLA 15350

Query: 224   KXPLKC 241
                 KC
Sbjct: 15351 CINQKC 15356



 Score = 28.3 bits (60), Expect = 7.2
 Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 3/62 (4%)
 Frame = +2

Query: 44   DYCEKNPCIQPPLVCPKNTEHR-ARHAGKCACCPACVTLLGEGA--TCKIYSKELGETPS 214
            D+ +KNPC+  P  C +N+E +   +   C+C P  +     G    C I S + G+T S
Sbjct: 9092 DHPKKNPCVPSP--CGRNSECKLLNNRAVCSCIPGYLGDPQSGCQPECDINS-DCGDTLS 9148

Query: 215  AV 220
             +
Sbjct: 9149 CI 9150


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,156,567
Number of Sequences: 53049
Number of extensions: 409862
Number of successful extensions: 999
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 964
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 998
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2089831299
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)