Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0725
         (389 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF230521-1|AAF36974.2|  185|Anopheles gambiae homeobox transcrip...    22   6.9  
AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal...    22   9.1  

>AF230521-1|AAF36974.2|  185|Anopheles gambiae homeobox
           transcription factor protein.
          Length = 185

 Score = 22.2 bits (45), Expect = 6.9
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = -1

Query: 104 PYYIFDSNQFVYFQHY*DVNFTNAQT 27
           P+  +  NQ+ Y Q+Y + +  N QT
Sbjct: 132 PHSHYSHNQYYYMQNYSNYSQHNFQT 157


>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
           growth factor receptorprotein.
          Length = 1433

 Score = 21.8 bits (44), Expect = 9.1
 Identities = 12/40 (30%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
 Frame = -1

Query: 143 DTFLSIHTNYNYIPYYI-FDSNQFVYFQHY*DV-NFTNAQ 30
           D F  ++TN+++ P YI  D ++   F    ++  F N Q
Sbjct: 334 DGFQQVYTNFSFGPRYIKIDPDRLEVFSTVKEITGFINIQ 373


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 331,740
Number of Sequences: 2352
Number of extensions: 5246
Number of successful extensions: 5
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 30356973
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)