Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0720
         (349 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q4FTH3 Cluster: Putative uncharacterized protein; n=2; ...    31   4.1  
UniRef50_A2EKF5 Cluster: Cyclin, N-terminal domain containing pr...    31   7.2  

>UniRef50_Q4FTH3 Cluster: Putative uncharacterized protein; n=2;
           Psychrobacter|Rep: Putative uncharacterized protein -
           Psychrobacter arcticum
          Length = 565

 Score = 31.5 bits (68), Expect = 4.1
 Identities = 17/42 (40%), Positives = 21/42 (50%)
 Frame = -2

Query: 255 ELAGDTDKVQEVQLPLCHLLHLAVTTILVVTSAKTVEFLEDN 130
           +L   T  V +  LP  HLLH  +T IL  T     EF +DN
Sbjct: 13  KLTAPTLSVTDFNLPSLHLLHDEITVILKDTEIHLGEFNDDN 54


>UniRef50_A2EKF5 Cluster: Cyclin, N-terminal domain containing
           protein; n=1; Trichomonas vaginalis G3|Rep: Cyclin,
           N-terminal domain containing protein - Trichomonas
           vaginalis G3
          Length = 290

 Score = 30.7 bits (66), Expect = 7.2
 Identities = 12/40 (30%), Positives = 20/40 (50%)
 Frame = +1

Query: 142 EFHSFCGRYDENSRNCEMKQMTQRKLHFLHLVRIPCQLVT 261
           +F   C    E+  N  +  + Q +LH LHL+R   + +T
Sbjct: 150 DFDEICSFLVEDLENIVLDDIVQTELHILHLIRFNARFIT 189


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 217,502,456
Number of Sequences: 1657284
Number of extensions: 3223987
Number of successful extensions: 6377
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 6184
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6377
length of database: 575,637,011
effective HSP length: 89
effective length of database: 428,138,735
effective search space used: 11131607110
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)