Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0719
         (598 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    23   1.5  
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    23   2.0  
AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.     22   4.5  
AF265298-1|AAG17641.1|  124|Tribolium castaneum putative cytochr...    21   7.9  

>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 23.4 bits (48), Expect = 1.5
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -3

Query: 368 NLPWDVNSEGSWV 330
           N  WDV+S GSW+
Sbjct: 187 NAWWDVHSTGSWL 199


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 11/26 (42%), Positives = 13/26 (50%)
 Frame = +3

Query: 111 RTWSLLQLSRSHWSSGLSPSRRQRPA 188
           R  S + L  S+W   LSP  RQ  A
Sbjct: 389 RYMSTIDLRSSYWQIPLSPESRQYTA 414


>AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.
          Length = 301

 Score = 21.8 bits (44), Expect = 4.5
 Identities = 14/46 (30%), Positives = 18/46 (39%)
 Frame = -3

Query: 383 YLKIQNLPWDVNSEGSWVYEKDVLKITFPLKQKQPEDSKRPVASPL 246
           +L+ Q L       G + YE   +   FPL      D  R   SPL
Sbjct: 55  HLQQQQLKKQRLDNGDYPYENGHMGAEFPLDIMMRRDMSRLEKSPL 100


>AF265298-1|AAG17641.1|  124|Tribolium castaneum putative cytochrome
           P450 monooxigenase protein.
          Length = 124

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 7/19 (36%), Positives = 14/19 (73%)
 Frame = -1

Query: 571 EMQHLDNMMKELSLKFPSI 515
           EM++L+ ++KE    +PS+
Sbjct: 43  EMKYLEMVLKEAQRLYPSV 61


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 129,060
Number of Sequences: 336
Number of extensions: 2530
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15039504
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)