Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0717
         (449 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q7K1C0 Cluster: GH23780p; n=6; Endopterygota|Rep: GH237...    54   1e-06
UniRef50_UPI000051599A Cluster: PREDICTED: hypothetical protein;...    34   1.6  
UniRef50_O77244 Cluster: Head-activator binding protein precurso...    33   3.8  
UniRef50_O43920 Cluster: NADH dehydrogenase [ubiquinone] iron-su...    33   3.8  
UniRef50_A0VSK5 Cluster: Transcriptional regulator, LysR family;...    32   6.6  
UniRef50_A4RW29 Cluster: Predicted protein; n=2; Ostreococcus|Re...    31   8.8  
UniRef50_Q4Q9L5 Cluster: Putative uncharacterized protein; n=3; ...    31   8.8  

>UniRef50_Q7K1C0 Cluster: GH23780p; n=6; Endopterygota|Rep: GH23780p
           - Drosophila melanogaster (Fruit fly)
          Length = 101

 Score = 54.4 bits (125), Expect = 1e-06
 Identities = 23/47 (48%), Positives = 31/47 (65%)
 Frame = +1

Query: 124 TISPFFRSPFTDITGGMIDFQILGRCGKQXMXLMNCIEAYGLGRVSR 264
           +++PF R P TD+TG +I+ Q   +CGK  M +M C EAYGL R  R
Sbjct: 2   SLTPFLRLPLTDLTGCLINHQTYDKCGKFEMKMMECFEAYGLERGKR 48



 Score = 41.1 bits (92), Expect = 0.011
 Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
 Frame = +3

Query: 255 GIKKCKGYXDDYGECRTLTKQLKRFLAIRKERQRQXACGKLTDXKKYVS-PRVDSY 419
           G ++C     D+ EC  + KQL RF A+R ER +Q   G+    + +   PRVD+Y
Sbjct: 46  GKRECADLISDFQECVGMQKQLMRFHAMRNERYKQWLKGERKGQEFFADPPRVDAY 101


>UniRef50_UPI000051599A Cluster: PREDICTED: hypothetical protein;
           n=1; Apis mellifera|Rep: PREDICTED: hypothetical protein
           - Apis mellifera
          Length = 106

 Score = 33.9 bits (74), Expect = 1.6
 Identities = 15/40 (37%), Positives = 19/40 (47%)
 Frame = +1

Query: 127 ISPFFRSPFTDITGGMIDFQILGRCGKQXMXLMNCIEAYG 246
           + P F SP TD  G  +  Q    C    + L  C+EAYG
Sbjct: 12  MEPLFTSPITDYFGISLHAQCYSACKDFELRLAECVEAYG 51


>UniRef50_O77244 Cluster: Head-activator binding protein precursor;
            n=2; Hydra|Rep: Head-activator binding protein precursor
            - Chlorohydra viridissima (Hydra) (Hydra viridis)
          Length = 1661

 Score = 32.7 bits (71), Expect = 3.8
 Identities = 16/48 (33%), Positives = 23/48 (47%)
 Frame = +3

Query: 171  YDRFSDFGPLWETRXGSDELHRSLWPRSGIKKCKGYXDDYGECRTLTK 314
            Y + S    + + R GSDE +    P + I  C G+    GEC +L K
Sbjct: 1255 YQKISKCDGMLDCRDGSDEYNCKTMPTTPIVSCTGFRCKTGECISLKK 1302


>UniRef50_O43920 Cluster: NADH dehydrogenase [ubiquinone]
           iron-sulfur protein 5; n=25; Euteleostomi|Rep: NADH
           dehydrogenase [ubiquinone] iron-sulfur protein 5 - Homo
           sapiens (Human)
          Length = 106

 Score = 32.7 bits (71), Expect = 3.8
 Identities = 16/46 (34%), Positives = 24/46 (52%)
 Frame = +3

Query: 261 KKCKGYXDDYGECRTLTKQLKRFLAIRKERQRQXACGKLTDXKKYV 398
           K+CK   DD+ EC    K ++R   IRK+R +    GK T    ++
Sbjct: 54  KECKIEYDDFVECLLRQKTMRRAGTIRKQRDKLIKEGKYTPPPHHI 99


>UniRef50_A0VSK5 Cluster: Transcriptional regulator, LysR family;
           n=1; Dinoroseobacter shibae DFL 12|Rep: Transcriptional
           regulator, LysR family - Dinoroseobacter shibae DFL 12
          Length = 317

 Score = 31.9 bits (69), Expect = 6.6
 Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
 Frame = +1

Query: 148 PFTDITGGMIDFQILGRCGKQXMXLMNCIEAYGLGRVSRSVRATSMTMEN-VERLQNNSN 324
           PF D + GM D  I G  G+Q    +   +   + R +  +  T  T  + +ERL+    
Sbjct: 12  PFRDSSEGMKDLDIYGLDGRQLKLFLCVFDTVSVSRAADQLGITQSTASHGLERLRKALG 71

Query: 325 XFWLYAKNGRG 357
              L+ K+GRG
Sbjct: 72  D-PLFVKSGRG 81


>UniRef50_A4RW29 Cluster: Predicted protein; n=2; Ostreococcus|Rep:
           Predicted protein - Ostreococcus lucimarinus CCE9901
          Length = 235

 Score = 31.5 bits (68), Expect = 8.8
 Identities = 19/58 (32%), Positives = 26/58 (44%), Gaps = 1/58 (1%)
 Frame = +3

Query: 156 GYYGWYDRFSDFGPLWET-RXGSDELHRSLWPRSGIKKCKGYXDDYGECRTLTKQLKR 326
           G   W DR   F  L+ET   G+ E  + LW   G +  K    DY + R +   LK+
Sbjct: 165 GMEAWLDRRRKFNNLFETVLEGTGEKKQKLWGDIGAETEKDVGIDYDKYRNIYDDLKK 222


>UniRef50_Q4Q9L5 Cluster: Putative uncharacterized protein; n=3;
           Leishmania|Rep: Putative uncharacterized protein -
           Leishmania major
          Length = 638

 Score = 31.5 bits (68), Expect = 8.8
 Identities = 14/40 (35%), Positives = 22/40 (55%)
 Frame = +3

Query: 294 ECRTLTKQLKRFLAIRKERQRQXACGKLTDXKKYVSPRVD 413
           E + +  QL+R +  RKE QR      L+D  +++  RVD
Sbjct: 479 EAQAMLLQLRRLMEARKEMQRGKGMDDLSDAMRHIQNRVD 518


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 378,789,460
Number of Sequences: 1657284
Number of extensions: 6667765
Number of successful extensions: 12436
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 12238
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12435
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 23604537544
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)