Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0717
         (449 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY069186-1|AAL39331.1|  101|Drosophila melanogaster GH23780p pro...    54   7e-08
AE014134-52|AAF51538.1|  101|Drosophila melanogaster CG11455-PB,...    54   7e-08
AE014134-51|AAN10510.1|  101|Drosophila melanogaster CG11455-PA,...    54   7e-08
AY121668-1|AAM51995.1|  600|Drosophila melanogaster RE14390p pro...    28   5.0  
AE013599-2316|AAF57976.1|  543|Drosophila melanogaster CG8303-PA...    28   5.0  

>AY069186-1|AAL39331.1|  101|Drosophila melanogaster GH23780p
           protein.
          Length = 101

 Score = 54.4 bits (125), Expect = 7e-08
 Identities = 23/47 (48%), Positives = 31/47 (65%)
 Frame = +1

Query: 124 TISPFFRSPFTDITGGMIDFQILGRCGKQXMXLMNCIEAYGLGRVSR 264
           +++PF R P TD+TG +I+ Q   +CGK  M +M C EAYGL R  R
Sbjct: 2   SLTPFLRLPLTDLTGCLINHQTYDKCGKFEMKMMECFEAYGLERGKR 48



 Score = 41.1 bits (92), Expect = 7e-04
 Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
 Frame = +3

Query: 255 GIKKCKGYXDDYGECRTLTKQLKRFLAIRKERQRQXACGKLTDXKKYVS-PRVDSY 419
           G ++C     D+ EC  + KQL RF A+R ER +Q   G+    + +   PRVD+Y
Sbjct: 46  GKRECADLISDFQECVGMQKQLMRFHAMRNERYKQWLKGERKGQEFFADPPRVDAY 101


>AE014134-52|AAF51538.1|  101|Drosophila melanogaster CG11455-PB,
           isoform B protein.
          Length = 101

 Score = 54.4 bits (125), Expect = 7e-08
 Identities = 23/47 (48%), Positives = 31/47 (65%)
 Frame = +1

Query: 124 TISPFFRSPFTDITGGMIDFQILGRCGKQXMXLMNCIEAYGLGRVSR 264
           +++PF R P TD+TG +I+ Q   +CGK  M +M C EAYGL R  R
Sbjct: 2   SLTPFLRLPLTDLTGCLINHQTYDKCGKFEMKMMECFEAYGLERGKR 48



 Score = 41.1 bits (92), Expect = 7e-04
 Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
 Frame = +3

Query: 255 GIKKCKGYXDDYGECRTLTKQLKRFLAIRKERQRQXACGKLTDXKKYVS-PRVDSY 419
           G ++C     D+ EC  + KQL RF A+R ER +Q   G+    + +   PRVD+Y
Sbjct: 46  GKRECADLISDFQECVGMQKQLMRFHAMRNERYKQWLKGERKGQEFFADPPRVDAY 101


>AE014134-51|AAN10510.1|  101|Drosophila melanogaster CG11455-PA,
           isoform A protein.
          Length = 101

 Score = 54.4 bits (125), Expect = 7e-08
 Identities = 23/47 (48%), Positives = 31/47 (65%)
 Frame = +1

Query: 124 TISPFFRSPFTDITGGMIDFQILGRCGKQXMXLMNCIEAYGLGRVSR 264
           +++PF R P TD+TG +I+ Q   +CGK  M +M C EAYGL R  R
Sbjct: 2   SLTPFLRLPLTDLTGCLINHQTYDKCGKFEMKMMECFEAYGLERGKR 48



 Score = 41.1 bits (92), Expect = 7e-04
 Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
 Frame = +3

Query: 255 GIKKCKGYXDDYGECRTLTKQLKRFLAIRKERQRQXACGKLTDXKKYVS-PRVDSY 419
           G ++C     D+ EC  + KQL RF A+R ER +Q   G+    + +   PRVD+Y
Sbjct: 46  GKRECADLISDFQECVGMQKQLMRFHAMRNERYKQWLKGERKGQEFFADPPRVDAY 101


>AY121668-1|AAM51995.1|  600|Drosophila melanogaster RE14390p
           protein.
          Length = 600

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 17/50 (34%), Positives = 21/50 (42%)
 Frame = +3

Query: 183 SDFGPLWETRXGSDELHRSLWPRSGIKKCKGYXDDYGECRTLTKQLKRFL 332
           S F P    +   D+   S W     +KCKGY  D+    T TK L   L
Sbjct: 260 SQFDPYEMMKMAEDD---SAWEDFTDQKCKGYIRDHPNTYTFTKNLSENL 306


>AE013599-2316|AAF57976.1|  543|Drosophila melanogaster CG8303-PA
           protein.
          Length = 543

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 17/50 (34%), Positives = 21/50 (42%)
 Frame = +3

Query: 183 SDFGPLWETRXGSDELHRSLWPRSGIKKCKGYXDDYGECRTLTKQLKRFL 332
           S F P    +   D+   S W     +KCKGY  D+    T TK L   L
Sbjct: 203 SQFDPYEMMKMAEDD---SAWEDFTDQKCKGYIRDHPNTYTFTKNLSENL 249


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,571,624
Number of Sequences: 53049
Number of extensions: 299104
Number of successful extensions: 588
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 572
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 588
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1455824790
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)