Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0717
         (449 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC024811-2|AAF60773.1|  121|Caenorhabditis elegans Hypothetical ...    30   0.89 
Z83236-7|CAB05782.2|  257|Caenorhabditis elegans Hypothetical pr...    27   4.8  
Z81534-5|CAB04348.2|  694|Caenorhabditis elegans Hypothetical pr...    27   8.3  
Z73976-7|CAE17945.1|   74|Caenorhabditis elegans Hypothetical pr...    27   8.3  
Z47074-2|CAA87377.2|  694|Caenorhabditis elegans Hypothetical pr...    27   8.3  

>AC024811-2|AAF60773.1|  121|Caenorhabditis elegans Hypothetical
           protein Y54E10BL.5 protein.
          Length = 121

 Score = 29.9 bits (64), Expect = 0.89
 Identities = 20/50 (40%), Positives = 26/50 (52%)
 Frame = +3

Query: 249 RSGIKKCKGYXDDYGECRTLTKQLKRFLAIRKERQRQXACGKLTDXKKYV 398
           + G K C     D+ EC T  KQ KR  AIR++R +    GK+   K YV
Sbjct: 54  KMGRKYCDLEHRDFQECVTGDKQKKRADAIREQRCKLFLDGKIA--KPYV 101


>Z83236-7|CAB05782.2|  257|Caenorhabditis elegans Hypothetical
           protein K10H10.9 protein.
          Length = 257

 Score = 27.5 bits (58), Expect = 4.8
 Identities = 13/31 (41%), Positives = 16/31 (51%)
 Frame = +3

Query: 183 SDFGPLWETRXGSDELHRSLWPRSGIKKCKG 275
           SDF  L+E R      H+S+W   GI   KG
Sbjct: 156 SDFIRLFENRENLRHFHQSIWDLHGITNEKG 186


>Z81534-5|CAB04348.2|  694|Caenorhabditis elegans Hypothetical
           protein F37H8.2 protein.
          Length = 694

 Score = 26.6 bits (56), Expect = 8.3
 Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
 Frame = +1

Query: 166 GGMIDFQIL--GRCGKQXMXLMNCIEAYGLGRVSRSVRATSMTMENVERLQNNS 321
           G + D +IL    C K  + L + +    L  +   VRATS T  ++ER Q++S
Sbjct: 427 GELFDLKILTSSGCKKSNIYLPSVMLLLKLHILFSDVRATSSTQLSIERSQSSS 480


>Z73976-7|CAE17945.1|   74|Caenorhabditis elegans Hypothetical
           protein T07C12.13 protein.
          Length = 74

 Score = 26.6 bits (56), Expect = 8.3
 Identities = 12/33 (36%), Positives = 19/33 (57%)
 Frame = +3

Query: 114 YHGHYFSILPFTVHGYYGWYDRFSDFGPLWETR 212
           Y+G+Y     +  +GYYG   R + FGP  +T+
Sbjct: 44  YNGYYGGAYGYGEYGYYG--KREAGFGPTQQTK 74


>Z47074-2|CAA87377.2|  694|Caenorhabditis elegans Hypothetical
           protein F37H8.2 protein.
          Length = 694

 Score = 26.6 bits (56), Expect = 8.3
 Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
 Frame = +1

Query: 166 GGMIDFQIL--GRCGKQXMXLMNCIEAYGLGRVSRSVRATSMTMENVERLQNNS 321
           G + D +IL    C K  + L + +    L  +   VRATS T  ++ER Q++S
Sbjct: 427 GELFDLKILTSSGCKKSNIYLPSVMLLLKLHILFSDVRATSSTQLSIERSQSSS 480


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,871,648
Number of Sequences: 27780
Number of extensions: 164399
Number of successful extensions: 278
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 277
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 278
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 788595652
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)