Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0717
         (449 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At1g17190.1 68414.m02095 glutathione S-transferase, putative One...    28   2.5  
At4g04820.1 68417.m00704 hypothetical protein                          27   5.9  
At2g24930.1 68415.m02981 Ulp1 protease family protein contains P...    27   5.9  
At1g44750.2 68414.m05127 purine permease family protein similar ...    27   5.9  
At1g44750.1 68414.m05126 purine permease family protein similar ...    27   5.9  
At1g12230.1 68414.m01415 transaldolase, putative similar to Swis...    27   5.9  
At4g37800.1 68417.m05349 xyloglucan:xyloglucosyl transferase, pu...    27   7.7  

>At1g17190.1 68414.m02095 glutathione S-transferase, putative One of
           three repeated glutathione transferases. 65% identical
           to glutathione transferase [Arabidopsis thaliana]
           (gi|4006934). Location of est 141C5T7 (gb|T46669);
           supported by fl cDNA gi:14326476gb:AF385691.
          Length = 220

 Score = 28.3 bits (60), Expect = 2.5
 Identities = 10/27 (37%), Positives = 12/27 (44%)
 Frame = +3

Query: 114 YHGHYFSILPFTVHGYYGWYDRFSDFG 194
           Y G  F  L   + GYY W+     FG
Sbjct: 146 YGGEVFGYLDIALMGYYSWFKAMEKFG 172


>At4g04820.1 68417.m00704 hypothetical protein 
          Length = 253

 Score = 27.1 bits (57), Expect = 5.9
 Identities = 15/37 (40%), Positives = 21/37 (56%)
 Frame = -2

Query: 415 LSTLGDTYFXSSVNFPHAICLCRSLRIAKXRLSCFVS 305
           ++ L D++F  S    H + LCR LRI K  L C V+
Sbjct: 58  IAKLVDSHFLWSGKTVHYL-LCRQLRILKKELWCIVA 93


>At2g24930.1 68415.m02981 Ulp1 protease family protein contains Pfam
           profile PF02902: Ulp1 protease family, C-terminal
           catalytic domain
          Length = 926

 Score = 27.1 bits (57), Expect = 5.9
 Identities = 15/37 (40%), Positives = 21/37 (56%)
 Frame = -2

Query: 415 LSTLGDTYFXSSVNFPHAICLCRSLRIAKXRLSCFVS 305
           ++ L D++F  S    H + LCR LRI K  L C V+
Sbjct: 58  IAKLVDSHFLWSGKTVHYL-LCRQLRILKKELWCIVA 93


>At1g44750.2 68414.m05127 purine permease family protein similar to
           purine permease [Arabidopsis thaliana] GI:7620007;
           contains Pfam profile PF03151: Domain of unknown
           function, DUF250
          Length = 367

 Score = 27.1 bits (57), Expect = 5.9
 Identities = 14/48 (29%), Positives = 24/48 (50%)
 Frame = -1

Query: 413 VDSRRYVLLXISQLSACXLPLPFFAYSQKXFELFCKRSTFSIVIXVAL 270
           V   +Y++  +  L+A  L     +  Q  FE   KR TFS+V+ + +
Sbjct: 185 VSRSKYIVGFVCTLAASALYSLLLSLMQFSFEKILKRETFSVVLEMQI 232


>At1g44750.1 68414.m05126 purine permease family protein similar to
           purine permease [Arabidopsis thaliana] GI:7620007;
           contains Pfam profile PF03151: Domain of unknown
           function, DUF250
          Length = 379

 Score = 27.1 bits (57), Expect = 5.9
 Identities = 14/48 (29%), Positives = 24/48 (50%)
 Frame = -1

Query: 413 VDSRRYVLLXISQLSACXLPLPFFAYSQKXFELFCKRSTFSIVIXVAL 270
           V   +Y++  +  L+A  L     +  Q  FE   KR TFS+V+ + +
Sbjct: 197 VSRSKYIVGFVCTLAASALYSLLLSLMQFSFEKILKRETFSVVLEMQI 244


>At1g12230.1 68414.m01415 transaldolase, putative similar to
           Swiss-Prot:P30148 transaldolase B (EC 2.2.1.2)
           [Escherichia coli O157:H7]
          Length = 405

 Score = 27.1 bits (57), Expect = 5.9
 Identities = 13/32 (40%), Positives = 17/32 (53%)
 Frame = -2

Query: 406 LGDTYFXSSVNFPHAICLCRSLRIAKXRLSCF 311
           L DT F ++V+   A   C  L   + RLSCF
Sbjct: 111 LPDTIFRNAVDMALADSSCAGLETTESRLSCF 142


>At4g37800.1 68417.m05349 xyloglucan:xyloglucosyl transferase,
           putative / xyloglucan endotransglycosylase, putative /
           endo-xyloglucan transferase, putative similar to
           N-terminal partial sequence of endo-xyloglucan
           transferase GI:2244732 from [Gossypium hirsutum]
          Length = 293

 Score = 26.6 bits (56), Expect = 7.7
 Identities = 13/47 (27%), Positives = 22/47 (46%)
 Frame = +1

Query: 112 DIMDTISPFFRSPFTDITGGMIDFQILGRCGKQXMXLMNCIEAYGLG 252
           D   T++ F+ +  TD     +DF+ LG    Q   +   + A+G G
Sbjct: 89  DSAGTVTAFYMNSDTDSVRDELDFEFLGNRSGQPYTVQTNVFAHGKG 135


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,214,073
Number of Sequences: 28952
Number of extensions: 147760
Number of successful extensions: 270
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 265
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 270
length of database: 12,070,560
effective HSP length: 75
effective length of database: 9,899,160
effective search space used: 732537840
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)