Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0714
(449 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_03_0604 - 16132173-16132391,16132488-16132556,16132824-161328... 39 0.002
07_01_1036 + 9021395-9021658,9024214-9024690 36 0.015
08_02_1251 - 25592537-25593380,25593589-25593893 33 0.14
06_01_1008 - 7853089-7854147 33 0.14
08_01_0803 - 7771507-7772184,7772238-7772325,7772440-7772546 31 0.43
08_01_0797 + 7711772-7712869 31 0.57
08_01_0027 - 195321-195932,197206-197415 31 0.57
08_01_0801 - 7750548-7751708 30 0.99
08_02_1304 - 26008105-26009070 29 1.3
08_02_1310 - 26037025-26038074 29 2.3
10_08_0119 - 14952786-14953931,14954709-14954831 28 4.0
04_04_0804 + 28171110-28171176,28171829-28172317,28172384-28173072 28 4.0
10_08_0059 + 14529885-14530991 27 5.3
10_08_0129 - 15025076-15025858,15025951-15026283 27 7.0
10_08_0122 - 14982676-14983043,14983957-14985145 27 7.0
07_03_0351 + 17082571-17083087,17083135-17083148 27 7.0
12_02_0502 - 19746100-19746185,19746745-19750474 27 9.2
11_06_0458 + 23808402-23808469,23808800-23809684,23810011-238119... 27 9.2
04_04_0489 + 25600543-25601368,25601441-25602282 27 9.2
01_05_0604 - 23583244-23584989 27 9.2
>05_03_0604 -
16132173-16132391,16132488-16132556,16132824-16132898,
16132981-16133113,16133188-16133297,16133360-16133407,
16133657-16133983,16135006-16135233,16135360-16135689,
16135780-16136586
Length = 781
Score = 39.1 bits (87), Expect = 0.002
Identities = 25/63 (39%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Frame = +2
Query: 257 HKLVLSVCSPYFQEMFK--MNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNXKQEX*HHL 430
HKL+LS+ S F +MF M + VF +DV A L+QFMY GE+ E +
Sbjct: 366 HKLILSLWSMTFDKMFTNGMKESSASNVFFEDVPVEAFFLLIQFMYSGELKVDIEEITPV 425
Query: 431 LVQ 439
LV+
Sbjct: 426 LVE 428
>07_01_1036 + 9021395-9021658,9024214-9024690
Length = 246
Score = 35.9 bits (79), Expect = 0.015
Identities = 19/65 (29%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Frame = +2
Query: 248 IATHKLVLSVCSPYFQEMFK--MNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNXKQEX* 421
+ H+++L+ SP F+ M + M ++ I+ + DVS+ LR + +MY E ++
Sbjct: 81 VPAHRVILASRSPVFRAMLENEMEESRSGIIKIYDVSYDVLRAFVHYMYTAEALLDEQMA 140
Query: 422 HHLLV 436
LLV
Sbjct: 141 SDLLV 145
>08_02_1251 - 25592537-25593380,25593589-25593893
Length = 382
Score = 32.7 bits (71), Expect = 0.14
Identities = 15/49 (30%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Frame = +2
Query: 257 HKLVLSVCSPYFQEMFKMNPTQHPI--VFLKDVSHSALRDLLQFMYQGE 397
H+ +L+VCSP F+ + + + + L D+ + LL FMY G+
Sbjct: 238 HRALLAVCSPVFKALLLSSTAEAAACSITLNDIKPAMFEALLHFMYTGD 286
>06_01_1008 - 7853089-7854147
Length = 352
Score = 32.7 bits (71), Expect = 0.14
Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Frame = +2
Query: 257 HKLVLSVCSPYFQEMF--KMNPTQHPIVFLKDVSHSALRDLLQFMYQG 394
HK++L+ SP F F M + V +KD+ S + +L F+Y G
Sbjct: 191 HKIILAARSPVFMAEFFGPMKESSSQCVEIKDIEASVFKAMLHFIYTG 238
>08_01_0803 - 7771507-7772184,7772238-7772325,7772440-7772546
Length = 290
Score = 31.1 bits (67), Expect = 0.43
Identities = 17/48 (35%), Positives = 28/48 (58%), Gaps = 2/48 (4%)
Frame = +2
Query: 251 ATHKLVLSVCSPYFQ-EMF-KMNPTQHPIVFLKDVSHSALRDLLQFMY 388
A HK+VL++ SP F+ E+F M ++ +KD+ + LL F+Y
Sbjct: 131 AAHKVVLAMRSPVFKAELFGPMREAGAQVLPIKDIQPDVFKALLHFIY 178
>08_01_0797 + 7711772-7712869
Length = 365
Score = 30.7 bits (66), Expect = 0.57
Identities = 19/48 (39%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Frame = +2
Query: 251 ATHKLVLSVCSPYFQEMF--KMNPTQHPIVFLKDVSHSALRDLLQFMY 388
A HKLVL+ SP F+ F +M + +KD+ S R LL F+Y
Sbjct: 204 AAHKLVLAARSPVFKAEFYGEMIERGTFSIDIKDMQPSVFRALLHFIY 251
>08_01_0027 - 195321-195932,197206-197415
Length = 273
Score = 30.7 bits (66), Expect = 0.57
Identities = 17/63 (26%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Frame = +2
Query: 248 IATHKLVLSVCSPYFQEMF--KMNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNXKQEX* 421
+ HK +L+ CSP F+ MF + + + + D+ + L+ F+Y G + Q
Sbjct: 119 LKAHKAILASCSPVFESMFLHDLKEKESSTININDMCLESCSALIGFIY-GTIKLDQFWK 177
Query: 422 HHL 430
H L
Sbjct: 178 HRL 180
>08_01_0801 - 7750548-7751708
Length = 386
Score = 29.9 bits (64), Expect = 0.99
Identities = 19/49 (38%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
Frame = +2
Query: 251 ATHKLVLSVCSPYFQ-EMFKM--NPTQHPIVFLKDVSHSALRDLLQFMY 388
+ HKLVL++ SP F+ E+ + P PI + D+ + R LLQF+Y
Sbjct: 213 SVHKLVLAMRSPVFKAELCGLLREPGTQPITIV-DMQPAVFRALLQFIY 260
>08_02_1304 - 26008105-26009070
Length = 321
Score = 29.5 bits (63), Expect = 1.3
Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Frame = +2
Query: 257 HKLVLSVCSPYFQE--MFKMNPTQHPIVFLKDVSHSALRDLLQFMY 388
H+ VL+ SP F+ + M P V L+D+ + R LL F+Y
Sbjct: 168 HRAVLAARSPVFRAELLGSMAEATMPCVTLRDIEPATFRALLHFVY 213
>08_02_1310 - 26037025-26038074
Length = 349
Score = 28.7 bits (61), Expect = 2.3
Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Frame = +2
Query: 257 HKLVLSVCSPYFQEMF--KMNPTQHPIVFLKDVSHSALRDLLQFMY 388
H+ VL+ SP F+ M P V L+D+ +A R +L F+Y
Sbjct: 193 HRAVLAARSPVFKAALFGSMAEATAPSVALRDMDPAAFRAVLHFIY 238
>10_08_0119 - 14952786-14953931,14954709-14954831
Length = 422
Score = 27.9 bits (59), Expect = 4.0
Identities = 16/48 (33%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Frame = +2
Query: 251 ATHKLVLSVCSPYFQ-EMFK-MNPTQHPIVFLKDVSHSALRDLLQFMY 388
A H+LVL+ SP F+ E+FK M ++ + ++ + LL F+Y
Sbjct: 261 AAHRLVLAARSPVFKAELFKPMEEGTTDVIKIDNMDAQVFKALLVFIY 308
>04_04_0804 + 28171110-28171176,28171829-28172317,28172384-28173072
Length = 414
Score = 27.9 bits (59), Expect = 4.0
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = +2
Query: 278 CSPYFQEMFKMNPTQHPIVFLKDVSHSALRDLLQFMYQGEVN 403
C P + F T++P+VFL+ + + DLLQ + V+
Sbjct: 253 CEPRKEIFFTERNTENPLVFLRFLVSTPWGDLLQIKFSRRVH 294
>10_08_0059 + 14529885-14530991
Length = 368
Score = 27.5 bits (58), Expect = 5.3
Identities = 15/51 (29%), Positives = 27/51 (52%), Gaps = 4/51 (7%)
Frame = +2
Query: 248 IATHKLVLSVCSPYFQ-EMFKMNPTQH---PIVFLKDVSHSALRDLLQFMY 388
+A H++VL+ SP F+ E+ P + ++ + D+ R LL +MY
Sbjct: 212 VAAHRVVLAARSPVFKAELLAGVPAKDGGGAVIQIDDMDAEVFRSLLHYMY 262
>10_08_0129 - 15025076-15025858,15025951-15026283
Length = 371
Score = 27.1 bits (57), Expect = 7.0
Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 4/50 (8%)
Frame = +2
Query: 251 ATHKLVLSVCSPYF-QEMF---KMNPTQHPIVFLKDVSHSALRDLLQFMY 388
A H+LVL+V SP F E F K + ++ + D+ + LL F+Y
Sbjct: 179 AAHRLVLAVRSPVFVAEHFGPMKEGVNVNDVIEINDMDAQVFKALLNFIY 228
>10_08_0122 - 14982676-14983043,14983957-14985145
Length = 518
Score = 27.1 bits (57), Expect = 7.0
Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 4/50 (8%)
Frame = +2
Query: 251 ATHKLVLSVCSPYF-QEMF---KMNPTQHPIVFLKDVSHSALRDLLQFMY 388
A H+LVL+V SP F E F K + ++ + D+ + LL F+Y
Sbjct: 207 AAHRLVLAVRSPVFVAEHFGPMKEGVNVNDVIEINDMDAQVFKALLNFIY 256
>07_03_0351 + 17082571-17083087,17083135-17083148
Length = 176
Score = 27.1 bits (57), Expect = 7.0
Identities = 13/49 (26%), Positives = 26/49 (53%)
Frame = -1
Query: 278 ILIELIYVLQYTXSAANVTSTRSPRDSRP*KPADIFAWKLFQHSENCSS 132
+L+ L+++L + A T P + +P + D+F +LF + N S+
Sbjct: 9 LLLLLLFLLAAATATATATGNALPPEPKPARWPDVFHARLFTNLTNHSA 57
>12_02_0502 - 19746100-19746185,19746745-19750474
Length = 1271
Score = 26.6 bits (56), Expect = 9.2
Identities = 13/52 (25%), Positives = 28/52 (53%)
Frame = +2
Query: 158 TISTQICQRAFMACCRVEIS*T*RWLPKXCIATHKLVLSVCSPYFQEMFKMN 313
T+ TQ+ + + +E + ++LPK + +KL + C P F ++++ N
Sbjct: 1171 TLPTQMEKLVSLQSLHIEKAPRIQFLPKLPFSLNKLTIWGCDPRFLKLYERN 1222
>11_06_0458 +
23808402-23808469,23808800-23809684,23810011-23811961,
23812210-23812285,23813064-23813072,23813243-23813335,
23813578-23813581,23813780-23814703,23814926-23815909,
23816073-23816118,23816376-23816951,23817253-23817798,
23817820-23818416
Length = 2252
Score = 26.6 bits (56), Expect = 9.2
Identities = 13/32 (40%), Positives = 18/32 (56%), Gaps = 2/32 (6%)
Frame = -1
Query: 170 AWKLFQHS--ENCSSDAMIATTRRGTYPKLCT 81
AWK ++S EN ++ TTR GT K C+
Sbjct: 331 AWKTIRYSLLENNCGSRILVTTRIGTVAKSCS 362
>04_04_0489 + 25600543-25601368,25601441-25602282
Length = 555
Score = 26.6 bits (56), Expect = 9.2
Identities = 9/26 (34%), Positives = 17/26 (65%)
Frame = +2
Query: 50 FFKCFSYRNYKYKA*DRFHVESSLSW 127
FFK + Y NY+Y +R ++ +++W
Sbjct: 487 FFKKWMYANYRYLMGERPRLDEAMAW 512
>01_05_0604 - 23583244-23584989
Length = 581
Score = 26.6 bits (56), Expect = 9.2
Identities = 9/26 (34%), Positives = 17/26 (65%)
Frame = +2
Query: 50 FFKCFSYRNYKYKA*DRFHVESSLSW 127
FFK + Y NY+Y +R ++ +++W
Sbjct: 513 FFKKWMYANYRYLMGERPRLDEAMAW 538
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,157,772
Number of Sequences: 37544
Number of extensions: 214603
Number of successful extensions: 475
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 466
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 473
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 871620292
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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