Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0714
(449 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g30600.2 68415.m03729 BTB/POZ domain-containing protein conta... 43 1e-04
At2g30600.1 68415.m03728 BTB/POZ domain-containing protein conta... 43 1e-04
At1g01640.2 68414.m00082 speckle-type POZ protein-related contai... 37 0.007
At1g01640.1 68414.m00081 speckle-type POZ protein-related contai... 37 0.007
At5g21010.1 68418.m02497 speckle-type POZ protein-related contai... 33 0.089
At4g08455.1 68417.m01394 BTB/POZ domain-containing protein Inter... 33 0.089
At3g43700.1 68416.m04664 speckle-type POZ protein-related contai... 30 0.63
At4g04090.1 68417.m00578 speckle-type POZ protein-related contai... 29 1.9
At5g48510.1 68418.m05998 speckle-type POZ protein-related contai... 28 3.4
At5g45110.1 68418.m05536 ankyrin repeat family protein / BTB/POZ... 28 3.4
At2g40440.1 68415.m04990 BTB/POZ domain-containing protein conta... 27 4.4
>At2g30600.2 68415.m03729 BTB/POZ domain-containing protein contains
Pfam PF00651: BTB/POZ domain; contains Interpro
IPR000210/ PS50097: BTBB/POZ domain; similar to MigA
(GI:1841872) [Dictyostelium discoideum]
Length = 809
Score = 42.7 bits (96), Expect = 1e-04
Identities = 20/52 (38%), Positives = 33/52 (63%), Gaps = 2/52 (3%)
Frame = +2
Query: 254 THKLVLSVCSPYFQEMFK--MNPTQHPIVFLKDVSHSALRDLLQFMYQGEVN 403
+HK++LS+ S F +MF M+ + ++L DVS A + ++ FMY GE+N
Sbjct: 366 SHKVILSLWSVAFAKMFTNGMSESHSSTIYLTDVSPEAFKAMMNFMYSGELN 417
>At2g30600.1 68415.m03728 BTB/POZ domain-containing protein contains
Pfam PF00651: BTB/POZ domain; contains Interpro
IPR000210/ PS50097: BTBB/POZ domain; similar to MigA
(GI:1841872) [Dictyostelium discoideum]
Length = 809
Score = 42.7 bits (96), Expect = 1e-04
Identities = 20/52 (38%), Positives = 33/52 (63%), Gaps = 2/52 (3%)
Frame = +2
Query: 254 THKLVLSVCSPYFQEMFK--MNPTQHPIVFLKDVSHSALRDLLQFMYQGEVN 403
+HK++LS+ S F +MF M+ + ++L DVS A + ++ FMY GE+N
Sbjct: 366 SHKVILSLWSVAFAKMFTNGMSESHSSTIYLTDVSPEAFKAMMNFMYSGELN 417
>At1g01640.2 68414.m00082 speckle-type POZ protein-related contains
Pfam profile:PF00651 BTB/POZ domain; similar to
Speckle-type POZ protein (SP:O43791) [Homo sapiens]
Length = 207
Score = 36.7 bits (81), Expect = 0.007
Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Frame = +2
Query: 248 IATHKLVLSVCSPYFQEMF---KMNPTQHPIVFLKDVSHSALRDLLQFMYQGEV 400
I THK VL+ S F+ M + + + L D+SH L+ LL+F+Y G +
Sbjct: 37 IPTHKAVLAARSKVFRNMLDSDECKTSPEESITLPDLSHDELKSLLEFLYSGNL 90
>At1g01640.1 68414.m00081 speckle-type POZ protein-related contains
Pfam profile:PF00651 BTB/POZ domain; similar to
Speckle-type POZ protein (SP:O43791) [Homo sapiens]
Length = 207
Score = 36.7 bits (81), Expect = 0.007
Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Frame = +2
Query: 248 IATHKLVLSVCSPYFQEMF---KMNPTQHPIVFLKDVSHSALRDLLQFMYQGEV 400
I THK VL+ S F+ M + + + L D+SH L+ LL+F+Y G +
Sbjct: 37 IPTHKAVLAARSKVFRNMLDSDECKTSPEESITLPDLSHDELKSLLEFLYSGNL 90
>At5g21010.1 68418.m02497 speckle-type POZ protein-related contains
Pfam PF00651 : BTB/POZ domain; contains Pfam PF00917:
MATH domain; similar to Speckle-type POZ protein
(SP:O43791) [Homo sapiens]
Length = 410
Score = 33.1 bits (72), Expect = 0.089
Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = +2
Query: 257 HKLVLSVCSPYFQ-EMFKMNPTQHPIVFLKDVSHSALRDLLQFMYQ 391
HKLVL+ SP+F+ + F + V + D+ + LLQFMY+
Sbjct: 212 HKLVLAARSPFFKSKFFSEFEANNTEVTINDLEPKVFKALLQFMYK 257
>At4g08455.1 68417.m01394 BTB/POZ domain-containing protein Interpro
IPR000210/ PS50097: BTBB/POZ domain; similar to POZ 56
protein (GI:17483747) [Mus musculus]
Length = 243
Score = 33.1 bits (72), Expect = 0.089
Identities = 21/68 (30%), Positives = 33/68 (48%), Gaps = 2/68 (2%)
Frame = +2
Query: 248 IATHKLVLSVCSPYFQEMFK--MNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNXKQEX* 421
I HK VL SP F+ M + M + + + DVS+ ALR + ++Y E ++
Sbjct: 80 IPAHKSVLVSRSPVFKAMLENEMEESLSGTIKISDVSYDALRTFVYYLYTAEACLDEQMA 139
Query: 422 HHLLVQRD 445
LLV +
Sbjct: 140 CDLLVMSE 147
>At3g43700.1 68416.m04664 speckle-type POZ protein-related contains
Pfam PF00651 : BTB/POZ domain; contains Pfam PF00917:
MATH domain; similar to Speckle-type POZ protein
(SP:O43791) [Homo sapiens]
Length = 415
Score = 30.3 bits (65), Expect = 0.63
Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Frame = +2
Query: 257 HKLVLSVCSPYFQEMFKMNPTQ-HPIVFLKDVSHSALRDLLQFMYQ 391
HKLVL+ S +F+ MF + + V + D+ + LL FMY+
Sbjct: 219 HKLVLAARSQFFRSMFYNTLAENNSDVVISDLEPKVFKALLHFMYK 264
>At4g04090.1 68417.m00578 speckle-type POZ protein-related contains
Pfam PF00651 : BTB/POZ domain; similar to Speckle-type
POZ protein (SP:O43791) [Homo sapiens]
Length = 192
Score = 28.7 bits (61), Expect = 1.9
Identities = 15/51 (29%), Positives = 26/51 (50%), Gaps = 4/51 (7%)
Frame = +2
Query: 248 IATHKLVLSVCSPYFQEMFKMN----PTQHPIVFLKDVSHSALRDLLQFMY 388
I+ HK +LS S F+EMF+ + ++ + L ++ H L + F Y
Sbjct: 38 ISAHKRILSARSEVFEEMFESDKYKASSKLETITLSEMKHEVLEAFVDFTY 88
>At5g48510.1 68418.m05998 speckle-type POZ protein-related contains
Pfam PF00651 : BTB/POZ domain; similar to Speckle-type
POZ protein (SP:O43791) [Homo sapiens]
Length = 224
Score = 27.9 bits (59), Expect = 3.4
Identities = 15/51 (29%), Positives = 29/51 (56%), Gaps = 5/51 (9%)
Frame = +2
Query: 248 IATHKLVLSVCSPYFQEMFKMN----PTQH-PIVFLKDVSHSALRDLLQFM 385
I+ HKL+L+ S F+ MF+++ T+H + L ++ H L ++F+
Sbjct: 39 ISAHKLILASRSEVFKNMFELDEFKTSTKHVETITLSEMKHEELEAFVEFI 89
>At5g45110.1 68418.m05536 ankyrin repeat family protein / BTB/POZ
domain-containing protein contains Pfam domain, PF00023:
Ankyrin repeat and Pfam domain, PF00651: BTB/POZ domain
Length = 586
Score = 27.9 bits (59), Expect = 3.4
Identities = 16/61 (26%), Positives = 32/61 (52%), Gaps = 10/61 (16%)
Frame = +2
Query: 248 IATHKLVLSVCSPYFQEMF----KMNPTQHPIVFLKD------VSHSALRDLLQFMYQGE 397
+ H+ +L+ S +FQ++F K++ T+ P L++ V+H A L ++Y G
Sbjct: 71 VGVHRCILAARSKFFQDLFKKEKKISKTEKPKYQLREMLPYGAVAHEAFLYFLSYIYTGR 130
Query: 398 V 400
+
Sbjct: 131 L 131
>At2g40440.1 68415.m04990 BTB/POZ domain-containing protein contains
Pfam PF00651: BTB/POZ domain; contains Interpro
IPR000210/ PS50097: BTBB/POZ domain;
Length = 194
Score = 27.5 bits (58), Expect = 4.4
Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 5/65 (7%)
Frame = +2
Query: 251 ATHKLVLSVCSPYFQEMFKMN----PTQHPIVFLKDVSHSALRDLLQFMY-QGEVNXKQE 415
+ HKLVLS S F++M + + Q + L ++ H L ++F+Y G + +E
Sbjct: 41 SAHKLVLSARSEVFKKMLESDEIKASAQLETITLCEMKHEELEAFIEFIYSDGSMLSAKE 100
Query: 416 X*HHL 430
H +
Sbjct: 101 KQHKM 105
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,249,055
Number of Sequences: 28952
Number of extensions: 180029
Number of successful extensions: 362
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 355
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 359
length of database: 12,070,560
effective HSP length: 75
effective length of database: 9,899,160
effective search space used: 732537840
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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