Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0712
         (548 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    24   0.76 
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    21   5.4  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    21   7.1  
AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    21   7.1  
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    21   7.1  
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    21   9.4  

>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 24.2 bits (50), Expect = 0.76
 Identities = 11/27 (40%), Positives = 14/27 (51%)
 Frame = +3

Query: 126 PHGSTFRLGADSGRFSQCCSRPPCEQR 206
           P+G T   G D G +   CS  PCE +
Sbjct: 88  PYGYT---GKDCGEYVDWCSTNPCENQ 111


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 21.4 bits (43), Expect = 5.4
 Identities = 9/24 (37%), Positives = 16/24 (66%)
 Frame = +2

Query: 110 LSVLVASWINISAWG*LRKIFSVL 181
           LSV+ +S+++I+ W  L K F  +
Sbjct: 488 LSVIKSSFLDINTWKMLVKSFDAI 511


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 21.0 bits (42), Expect = 7.1
 Identities = 10/35 (28%), Positives = 17/35 (48%)
 Frame = +1

Query: 340 GRLHRG*RQTRGEERSAWLHIASIHSSLRFAGGLY 444
           G  H G  ++     +AW  + S  S L  +GG++
Sbjct: 172 GATHHGGIKSDSVTSNAWWDVHSTGSWLDMSGGMH 206


>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 21.0 bits (42), Expect = 7.1
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = -2

Query: 313 GECWTSRFTW 284
           GE W SR++W
Sbjct: 149 GEHWLSRYSW 158


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 21.0 bits (42), Expect = 7.1
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = -2

Query: 313 GECWTSRFTW 284
           GE W SR++W
Sbjct: 149 GEHWLSRYSW 158


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 20.6 bits (41), Expect = 9.4
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = -2

Query: 400 YVTMLIFLLLVF 365
           Y T  IFLLL+F
Sbjct: 244 YTTYTIFLLLIF 255


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 126,589
Number of Sequences: 336
Number of extensions: 2686
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13516233
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)