BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= tesS0712 (548 letters) Database: spombe 5004 sequences; 2,362,478 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SPBC1289.04c |pob1||Boi family protein|Schizosaccharomyces pombe... 27 1.4 SPBC32C12.03c |ppk25||serine/threonine protein kinase Ppk25 |Sch... 27 2.4 SPCC1259.08 |||conserved fungal protein|Schizosaccharomyces pomb... 25 5.6 >SPBC1289.04c |pob1||Boi family protein|Schizosaccharomyces pombe|chr 2|||Manual Length = 871 Score = 27.5 bits (58), Expect = 1.4 Identities = 17/58 (29%), Positives = 30/58 (51%), Gaps = 1/58 (1%) Frame = +3 Query: 201 QRILPPVASPCCRGSR-PWSSIXSDKDKFQVNLDVQHSPRKKSLLKRRTATSWLKANT 371 Q ++PP+A+P R S+ S++ + +F N SP +LKR + T + N+ Sbjct: 396 QYVIPPLATPSSRNSKSTQSAVPENVSRFDSNEPSATSP----ILKRSSPTDSISQNS 449 >SPBC32C12.03c |ppk25||serine/threonine protein kinase Ppk25 |Schizosaccharomyces pombe|chr 2|||Manual Length = 423 Score = 26.6 bits (56), Expect = 2.4 Identities = 16/64 (25%), Positives = 28/64 (43%) Frame = +3 Query: 180 CSRPPCEQRILPPVASPCCRGSRPWSSIXSDKDKFQVNLDVQHSPRKKSLLKRRTATSWL 359 C R P + +P + S G + S S+ + + +PRK+ L++ WL Sbjct: 246 CGRVPFDDVSVPMLHSKIKSGKLEFPSYISEDCCSLIAAMLNVNPRKRCSLEQAAKFPWL 305 Query: 360 KANT 371 K N+ Sbjct: 306 KKNS 309 >SPCC1259.08 |||conserved fungal protein|Schizosaccharomyces pombe|chr 3|||Manual Length = 394 Score = 25.4 bits (53), Expect = 5.6 Identities = 13/35 (37%), Positives = 18/35 (51%) Frame = +3 Query: 330 LKRRTATSWLKANTRRRKISMVTYRVNSLVATLCR 434 LKR S+ ANT RK ++V +AT C+ Sbjct: 126 LKRPAKVSFALANTPSRKGNLVPQSPRRTIATTCK 160 Database: spombe Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 2,362,478 Number of sequences in database: 5004 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 2,202,342 Number of Sequences: 5004 Number of extensions: 42472 Number of successful extensions: 92 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 90 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 92 length of database: 2,362,478 effective HSP length: 69 effective length of database: 2,017,202 effective search space used: 227943826 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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