Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0712
(548 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_02_0485 - 8808139-8808618 40 0.002
03_02_0484 + 8805053-8805538 39 0.002
03_02_0483 - 8804021-8804485 39 0.002
03_02_0478 + 8775892-8776377 39 0.002
01_01_0230 - 1946079-1946786,1946981-1947141,1948010-1948457 39 0.002
01_01_0229 - 1943473-1943922 39 0.003
01_01_0231 + 1951047-1951499 38 0.004
01_01_0227 + 1933247-1933699 34 0.065
03_02_0345 + 7664564-7665277,7665672-7665921,7665996-7666015 33 0.20
03_01_0491 + 3720842-3720958,3721904-3723109 31 0.80
10_05_0086 + 9025410-9025730,9025974-9026008,9026194-9026279,902... 30 1.1
05_03_0545 - 15244647-15245147,15245342-15245635 29 1.8
05_01_0396 - 3121189-3121226,3121552-3121609,3121938-3122060,312... 29 2.4
09_06_0356 - 22498300-22498350,22499251-22499425,22499543-22500786 29 3.2
09_03_0036 + 11772940-11773171,11774995-11775104 29 3.2
08_01_0175 - 1497700-1498459,1498546-1499939 29 3.2
05_06_0049 + 25182075-25182332,25182624-25182882,25182986-251832... 28 4.3
12_01_0636 + 5363436-5363848,5364041-5364354,5364792-5364817 28 5.6
01_06_0206 + 27526171-27526815 28 5.6
03_02_1003 - 13127251-13128468 27 7.5
07_01_1127 + 10456895-10457388,10457488-10458112 27 9.9
05_01_0238 - 1783742-1783780,1783838-1783936,1784033-1784155 27 9.9
04_03_0801 - 19828175-19828770,19828913-19828994 27 9.9
>03_02_0485 - 8808139-8808618
Length = 159
Score = 39.5 bits (88), Expect = 0.002
Identities = 26/79 (32%), Positives = 42/79 (53%), Gaps = 8/79 (10%)
Frame = +2
Query: 302 PAFAPEEISVKTADGYIV-VEGKH----EEKKDQHGYISR---QFTRRYALPEGCTAESV 457
P EE+ V+ DG I+ + G+ EEK D+ + R +F RR+ LPE E +
Sbjct: 70 PGLKKEEVKVEVDDGNILQISGERSREQEEKSDKWHRVERSSGKFLRRFRLPENTKPEQI 129
Query: 458 ESRLSSDGVLSVIAPRXCP 514
++ + +GVL+V P+ P
Sbjct: 130 KASM-ENGVLTVTVPKEEP 147
>03_02_0484 + 8805053-8805538
Length = 161
Score = 39.1 bits (87), Expect = 0.002
Identities = 25/79 (31%), Positives = 42/79 (53%), Gaps = 8/79 (10%)
Frame = +2
Query: 302 PAFAPEEISVKTADGYIV-VEGKH----EEKKDQHGYISR---QFTRRYALPEGCTAESV 457
P EE+ V+ DG ++ + G+ EEK D+ + R +F RR+ LPE E +
Sbjct: 72 PGLKKEEVKVEVEDGNVLQISGERSKEQEEKTDKWHRVERSSGKFLRRFRLPENTKPEQI 131
Query: 458 ESRLSSDGVLSVIAPRXCP 514
++ + +GVL+V P+ P
Sbjct: 132 KASM-ENGVLTVTVPKEEP 149
>03_02_0483 - 8804021-8804485
Length = 154
Score = 39.1 bits (87), Expect = 0.002
Identities = 25/79 (31%), Positives = 42/79 (53%), Gaps = 8/79 (10%)
Frame = +2
Query: 302 PAFAPEEISVKTADGYIV-VEGKH----EEKKDQHGYISR---QFTRRYALPEGCTAESV 457
P EE+ V+ DG ++ + G+ EEK D+ + R +F RR+ LPE E +
Sbjct: 65 PGLKKEEVKVEVEDGNVLQISGERIKEQEEKTDKWHRVERSSGKFLRRFRLPENTKPEQI 124
Query: 458 ESRLSSDGVLSVIAPRXCP 514
++ + +GVL+V P+ P
Sbjct: 125 KASM-ENGVLTVTVPKEEP 142
>03_02_0478 + 8775892-8776377
Length = 161
Score = 39.1 bits (87), Expect = 0.002
Identities = 25/76 (32%), Positives = 41/76 (53%), Gaps = 8/76 (10%)
Frame = +2
Query: 302 PAFAPEEISVKTADGYIV-VEGKH----EEKKDQHGYISR---QFTRRYALPEGCTAESV 457
P EE+ V+ DG I+ + G+ EEK DQ + R +F RR+ LP+ E +
Sbjct: 72 PGLKKEEVKVEVDDGNILQISGERNKEQEEKTDQWHRVERSSGKFLRRFRLPDNAKPEQI 131
Query: 458 ESRLSSDGVLSVIAPR 505
++ + +GVL+V P+
Sbjct: 132 KASM-ENGVLTVTVPK 146
>01_01_0230 - 1946079-1946786,1946981-1947141,1948010-1948457
Length = 438
Score = 39.1 bits (87), Expect = 0.002
Identities = 26/80 (32%), Positives = 42/80 (52%), Gaps = 8/80 (10%)
Frame = +2
Query: 290 KPGRPAFAPEEISVKTADGYI-VVEGKH----EEKKDQHGYISR---QFTRRYALPEGCT 445
K P EE+ V+ +G + V+ G+ E+K D+ + R QF RR+ LPE
Sbjct: 57 KADLPGVKKEEVKVEVEEGNVLVISGQRSKEKEDKNDKWHRVERSSGQFMRRFRLPENAK 116
Query: 446 AESVESRLSSDGVLSVIAPR 505
+ V++ L +GVL+V P+
Sbjct: 117 VDQVKAGL-ENGVLTVTVPK 135
>01_01_0229 - 1943473-1943922
Length = 149
Score = 38.7 bits (86), Expect = 0.003
Identities = 25/80 (31%), Positives = 42/80 (52%), Gaps = 8/80 (10%)
Frame = +2
Query: 290 KPGRPAFAPEEISVKTADGYI-VVEGKH----EEKKDQHGYISR---QFTRRYALPEGCT 445
K P EE+ V+ +G + V+ G+ E+K D+ + R QF RR+ LPE
Sbjct: 56 KADLPGVKKEEVKVEVEEGNVLVISGQRSKEKEDKNDKWHRVERSSGQFMRRFRLPENAK 115
Query: 446 AESVESRLSSDGVLSVIAPR 505
+ V++ + +GVL+V P+
Sbjct: 116 VDQVKASM-ENGVLTVTVPK 134
>01_01_0231 + 1951047-1951499
Length = 150
Score = 38.3 bits (85), Expect = 0.004
Identities = 25/80 (31%), Positives = 42/80 (52%), Gaps = 8/80 (10%)
Frame = +2
Query: 290 KPGRPAFAPEEISVKTADGYI-VVEGKH----EEKKDQHGYISR---QFTRRYALPEGCT 445
K P EE+ V+ +G + V+ G+ E+K D+ + R QF RR+ LPE
Sbjct: 57 KADLPGVKKEEVKVEVEEGNVLVISGQRSKEKEDKNDKWHRVERSSGQFMRRFRLPENAK 116
Query: 446 AESVESRLSSDGVLSVIAPR 505
+ V++ + +GVL+V P+
Sbjct: 117 VDQVKAGM-ENGVLTVTVPK 135
>01_01_0227 + 1933247-1933699
Length = 150
Score = 34.3 bits (75), Expect = 0.065
Identities = 17/50 (34%), Positives = 29/50 (58%)
Frame = +2
Query: 356 VEGKHEEKKDQHGYISRQFTRRYALPEGCTAESVESRLSSDGVLSVIAPR 505
V+GK++E+ S +F RR+ LP G + V + + +GVL+V P+
Sbjct: 87 VDGKNDERWHHVERSSGKFQRRFRLPRGARVDQVSASM-DNGVLTVTVPK 135
>03_02_0345 + 7664564-7665277,7665672-7665921,7665996-7666015
Length = 327
Score = 32.7 bits (71), Expect = 0.20
Identities = 25/90 (27%), Positives = 43/90 (47%), Gaps = 10/90 (11%)
Frame = +2
Query: 302 PAFAPEEISVKTADGYIVVEGKHEEKKDQ------HGYISRQ----FTRRYALPEGCTAE 451
P + EE+ V D +V+ G+H++++ + G+ + + R ALP+ C
Sbjct: 151 PGLSREEVKVMVEDDALVIRGEHKKEEGEGAEGSGDGWWKERSVSSYDMRLALPDECDKS 210
Query: 452 SVESRLSSDGVLSVIAPRXCPPAVEGERKI 541
V + L +GVL V P+ E ERK+
Sbjct: 211 KVRAEL-KNGVLLVTVPK-----TEVERKV 234
>03_01_0491 + 3720842-3720958,3721904-3723109
Length = 440
Score = 30.7 bits (66), Expect = 0.80
Identities = 17/56 (30%), Positives = 26/56 (46%)
Frame = -3
Query: 258 WTKVSSRGSKVTPRAVVFSAHKGAGCSTEKIFRSQPQAEMLIHEATRTLNFVXX*P 91
W+ + +G KV A G GC K+F S+ +A+ H A +L F+ P
Sbjct: 379 WSLIGIKGDKV-------GADHGRGCKLAKVFESKDEAKASTHTAISSLPFMQGNP 427
>10_05_0086 +
9025410-9025730,9025974-9026008,9026194-9026279,
9026602-9026740,9028504-9028663
Length = 246
Score = 30.3 bits (65), Expect = 1.1
Identities = 25/66 (37%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Frame = +3
Query: 129 HGSTFRLGADS-GRFSQCCSRPPCEQRILPPVASPCCRGSRPWSSIXSDKDKFQVNLDVQ 305
HGST G +S GR + S PP LPP AS C S SS S + ++ +DV
Sbjct: 36 HGSTGGGGEESSGRQATLQSSPP-----LPPPASSCALPSSWLSSTSSLLGRCRLPMDVD 90
Query: 306 HSPRKK 323
P K
Sbjct: 91 SDPAAK 96
>05_03_0545 - 15244647-15245147,15245342-15245635
Length = 264
Score = 29.5 bits (63), Expect = 1.8
Identities = 13/21 (61%), Positives = 15/21 (71%)
Frame = -1
Query: 371 RVCLQPRCSRPPF*QRFLPGR 309
R CLQPR SRPP ++F GR
Sbjct: 221 RDCLQPRQSRPPHYRQFTRGR 241
>05_01_0396 -
3121189-3121226,3121552-3121609,3121938-3122060,
3122170-3122323,3122590-3122678,3123185-3123410,
3123575-3123760,3123859-3123914,3124381-3124464,
3124547-3124627,3124773-3125045,3125143-3125263,
3126094-3126230,3126406-3126697,3127401-3127585
Length = 700
Score = 29.1 bits (62), Expect = 2.4
Identities = 18/39 (46%), Positives = 22/39 (56%)
Frame = +1
Query: 148 LGLTPEDFLSAAAGPLVSREYYRPWRHLAAAARDLGPAS 264
LG T + L AA+ P +R RP AAA D+GPAS
Sbjct: 10 LGFTGDFVLDAASSPSATRRR-RPVPPEAAAGGDVGPAS 47
>09_06_0356 - 22498300-22498350,22499251-22499425,22499543-22500786
Length = 489
Score = 28.7 bits (61), Expect = 3.2
Identities = 15/32 (46%), Positives = 18/32 (56%)
Frame = +3
Query: 318 KKSLLKRRTATSWLKANTRRRKISMVTYRVNS 413
KKS T TS K TRRRK+++V Y S
Sbjct: 16 KKSAAGELTTTSEKKKKTRRRKVAVVYYLCRS 47
>09_03_0036 + 11772940-11773171,11774995-11775104
Length = 113
Score = 28.7 bits (61), Expect = 3.2
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +1
Query: 316 GRNLC*NGGRLHRG*RQTRGEERSAWLH 399
G+NL G+ H G R+ RG+ER LH
Sbjct: 21 GQNLMDRRGKRHEGRRERRGKERGRNLH 48
>08_01_0175 - 1497700-1498459,1498546-1499939
Length = 717
Score = 28.7 bits (61), Expect = 3.2
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = -1
Query: 518 LAGXSWVRLQTTHHLKTAGTXQIQXYSPPAK 426
+AG W+ + T +L + GT YSPP +
Sbjct: 47 IAGDGWIEITTGSNLPSGGTMGRVAYSPPVQ 77
>05_06_0049 +
25182075-25182332,25182624-25182882,25182986-25183204,
25183890-25184032,25184600-25184899
Length = 392
Score = 28.3 bits (60), Expect = 4.3
Identities = 12/40 (30%), Positives = 20/40 (50%)
Frame = -2
Query: 379 LLLVFAFNHDVAVRRFNRDFFRGECWTSRFTWNLSLSLXM 260
+L FA+ H V F R F R + W + W+ ++L +
Sbjct: 99 VLPTFAYEHKVFFGPFTRKFPRAQIWVAPRQWSWPINLPL 138
>12_01_0636 + 5363436-5363848,5364041-5364354,5364792-5364817
Length = 250
Score = 27.9 bits (59), Expect = 5.6
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +1
Query: 193 LVSREYYRPWRHLAAAARDLGPA 261
+V ++ PW+H+AAA GPA
Sbjct: 129 VVDEDHLLPWQHIAAAVTSGGPA 151
>01_06_0206 + 27526171-27526815
Length = 214
Score = 27.9 bits (59), Expect = 5.6
Identities = 12/43 (27%), Positives = 19/43 (44%)
Frame = +3
Query: 300 VQHSPRKKSLLKRRTATSWLKANTRRRKISMVTYRVNSLVATL 428
+ H PR + +L R W+ TR ++ YR + TL
Sbjct: 162 MMHCPRNRVVLARGRDAKWMPLQTRHMYEDVIVYRGQFYMVTL 204
>03_02_1003 - 13127251-13128468
Length = 405
Score = 27.5 bits (58), Expect = 7.5
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = +3
Query: 480 VCCL*SHPGXARQQWRVNAR 539
VCCL S G R WRV+ R
Sbjct: 152 VCCLASRGGGVRDSWRVDYR 171
>07_01_1127 + 10456895-10457388,10457488-10458112
Length = 372
Score = 27.1 bits (57), Expect = 9.9
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = -1
Query: 371 RVCLQPRCSRPPF*QRFLPGR 309
R CLQPR SRPP ++F R
Sbjct: 329 RDCLQPRQSRPPHYRQFTRSR 349
>05_01_0238 - 1783742-1783780,1783838-1783936,1784033-1784155
Length = 86
Score = 27.1 bits (57), Expect = 9.9
Identities = 12/20 (60%), Positives = 13/20 (65%)
Frame = +3
Query: 189 PPCEQRILPPVASPCCRGSR 248
PPC R+L PVAS RG R
Sbjct: 6 PPCLLRVLLPVASSSSRGLR 25
>04_03_0801 - 19828175-19828770,19828913-19828994
Length = 225
Score = 27.1 bits (57), Expect = 9.9
Identities = 14/32 (43%), Positives = 15/32 (46%), Gaps = 1/32 (3%)
Frame = +3
Query: 150 GADSGRFSQCCSRPPCE-QRILPPVASPCCRG 242
G G CCS PPC Q + PP PC G
Sbjct: 182 GGGGGCKKPCCSPPPCPWQPVCPP--PPCGGG 211
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,111,441
Number of Sequences: 37544
Number of extensions: 363646
Number of successful extensions: 986
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 964
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 986
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1233951264
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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