Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0712
(548 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_16632| Best HMM Match : HSP20 (HMM E-Value=1e-12) 62 3e-10
SB_21425| Best HMM Match : HSP20 (HMM E-Value=1.9e-26) 60 9e-10
SB_38963| Best HMM Match : HSP20 (HMM E-Value=7.3e-26) 58 5e-09
SB_37349| Best HMM Match : HSP20 (HMM E-Value=7.3e-26) 58 5e-09
SB_21424| Best HMM Match : HSP20 (HMM E-Value=0) 56 1e-08
SB_3291| Best HMM Match : No HMM Matches (HMM E-Value=.) 56 1e-08
SB_49292| Best HMM Match : HSP20 (HMM E-Value=1.9e-29) 56 3e-08
SB_58906| Best HMM Match : HSP20 (HMM E-Value=3e-26) 54 1e-07
SB_58907| Best HMM Match : HSP20 (HMM E-Value=4.2e-05) 32 0.27
SB_24406| Best HMM Match : DUF536 (HMM E-Value=1.5) 31 0.47
SB_13144| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.1
SB_13630| Best HMM Match : RVP (HMM E-Value=0.27) 29 3.3
SB_6186| Best HMM Match : HSP20 (HMM E-Value=1.1e-06) 29 3.3
SB_45576| Best HMM Match : LRR_1 (HMM E-Value=2.7e-14) 28 5.8
SB_16235| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.8
>SB_16632| Best HMM Match : HSP20 (HMM E-Value=1e-12)
Length = 210
Score = 62.1 bits (144), Expect = 3e-10
Identities = 29/73 (39%), Positives = 45/73 (61%)
Frame = +2
Query: 308 FAPEEISVKTADGYIVVEGKHEEKKDQHGYISRQFTRRYALPEGCTAESVESRLSSDGVL 487
+ PEEIS+K G I ++GKH+ + +HGY + +F R Y LP+G +V SR++ DG+L
Sbjct: 50 YRPEEISLKVEHGRIKIDGKHKSE-GEHGYETSEFHRSYNLPDGVDVSTVSSRITGDGLL 108
Query: 488 SVIAPRXCPPAVE 526
+ A + P E
Sbjct: 109 HIEALKAEPQETE 121
Score = 28.3 bits (60), Expect = 4.4
Identities = 16/44 (36%), Positives = 23/44 (52%)
Frame = +2
Query: 416 RRYALPEGCTAESVESRLSSDGVLSVIAPRXCPPAVEGERKIPI 547
R + LP+ +S+ SRL DG L + A R P ER++ I
Sbjct: 161 RHFVLPKDVDMDSLVSRLGKDGKLYIEAKRILHPTPH-ERQVNI 203
>SB_21425| Best HMM Match : HSP20 (HMM E-Value=1.9e-26)
Length = 185
Score = 60.5 bits (140), Expect = 9e-10
Identities = 32/79 (40%), Positives = 46/79 (58%)
Frame = +2
Query: 308 FAPEEISVKTADGYIVVEGKHEEKKDQHGYISRQFTRRYALPEGCTAESVESRLSSDGVL 487
F PEEI+ K +G I V G + ++ G+ S++F R Y LPEG S+ +R++ DG+L
Sbjct: 16 FKPEEITCKVENGKIKVSGLQRHESEE-GFDSKEFRRCYNLPEGVDESSISTRIAEDGML 74
Query: 488 SVIAPRXCPPAVEGERKIP 544
V A + PPA E K P
Sbjct: 75 HVEALKKSPPATT-ENKAP 92
Score = 42.7 bits (96), Expect = 2e-04
Identities = 23/67 (34%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Frame = +2
Query: 308 FAPEEISVKTADGYIVVEGKHEEKKDQHGYIS-RQFTRRYALPEGCTAESVESRLSSDGV 484
F PEE+ VK + V + E ++HG+ + RQF R + LP +++ RL DGV
Sbjct: 109 FKPEEVDVKVYGHELSVRARQE--CEEHGFFTARQFNRHFVLPREVDMDTLVPRLGKDGV 166
Query: 485 LSVIAPR 505
L + A +
Sbjct: 167 LYIEADK 173
>SB_38963| Best HMM Match : HSP20 (HMM E-Value=7.3e-26)
Length = 190
Score = 58.0 bits (134), Expect = 5e-09
Identities = 28/77 (36%), Positives = 47/77 (61%)
Frame = +2
Query: 308 FAPEEISVKTADGYIVVEGKHEEKKDQHGYISRQFTRRYALPEGCTAESVESRLSSDGVL 487
+ PEEIS K +G++ V+G+H + G+ ++F R +ALPEG A +V++R+S+ G L
Sbjct: 17 YRPEEISFKVENGFVKVQGRH-VNEGPFGFELKEFRRTFALPEGVEASNVKTRISNHGQL 75
Query: 488 SVIAPRXCPPAVEGERK 538
+ A + P GE +
Sbjct: 76 HIEAMKALPGPDGGEEE 92
Score = 43.2 bits (97), Expect = 1e-04
Identities = 22/80 (27%), Positives = 40/80 (50%)
Frame = +2
Query: 308 FAPEEISVKTADGYIVVEGKHEEKKDQHGYISRQFTRRYALPEGCTAESVESRLSSDGVL 487
F P+ I V+ ++V HE + + H Y + F R++ LP +S+ +RL +G L
Sbjct: 108 FPPDSIKVQVLGNELLVSANHEVEHEGH-YHAMHFNRQFVLPREVDMDSLTTRLDKEGKL 166
Query: 488 SVIAPRXCPPAVEGERKIPI 547
A + PA+ R++ +
Sbjct: 167 HFEAKKRNAPALPPVRELKV 186
>SB_37349| Best HMM Match : HSP20 (HMM E-Value=7.3e-26)
Length = 190
Score = 58.0 bits (134), Expect = 5e-09
Identities = 28/77 (36%), Positives = 47/77 (61%)
Frame = +2
Query: 308 FAPEEISVKTADGYIVVEGKHEEKKDQHGYISRQFTRRYALPEGCTAESVESRLSSDGVL 487
+ PEEIS K +G++ V+G+H + G+ ++F R +ALPEG A +V++R+S+ G L
Sbjct: 17 YRPEEISFKVENGFVKVQGRH-VNEGPFGFELKEFRRTFALPEGVEASNVKTRISNHGQL 75
Query: 488 SVIAPRXCPPAVEGERK 538
+ A + P GE +
Sbjct: 76 HIEAMKALPGPDGGEEE 92
Score = 43.2 bits (97), Expect = 1e-04
Identities = 22/80 (27%), Positives = 40/80 (50%)
Frame = +2
Query: 308 FAPEEISVKTADGYIVVEGKHEEKKDQHGYISRQFTRRYALPEGCTAESVESRLSSDGVL 487
F P+ I V+ ++V HE + + H Y + F R++ LP +S+ +RL +G L
Sbjct: 108 FPPDSIKVQVLGNELLVSANHEVEHEGH-YHAMHFNRQFVLPREVDMDSLTTRLDKEGKL 166
Query: 488 SVIAPRXCPPAVEGERKIPI 547
A + PA+ R++ +
Sbjct: 167 HFEAKKRNAPALPPVRELKV 186
>SB_21424| Best HMM Match : HSP20 (HMM E-Value=0)
Length = 424
Score = 56.4 bits (130), Expect = 1e-08
Identities = 27/77 (35%), Positives = 46/77 (59%)
Frame = +2
Query: 308 FAPEEISVKTADGYIVVEGKHEEKKDQHGYISRQFTRRYALPEGCTAESVESRLSSDGVL 487
+ PEEIS K +G++ V+G+H + G+ ++F R + LPEG A +V++R+S+ G L
Sbjct: 17 YRPEEISFKVENGFVKVQGRH-VNEGPFGFELKEFRRTFTLPEGVEASNVKTRISNHGQL 75
Query: 488 SVIAPRXCPPAVEGERK 538
+ A + P GE +
Sbjct: 76 HIEAMKALPGPDGGEEE 92
Score = 56.4 bits (130), Expect = 1e-08
Identities = 27/77 (35%), Positives = 46/77 (59%)
Frame = +2
Query: 308 FAPEEISVKTADGYIVVEGKHEEKKDQHGYISRQFTRRYALPEGCTAESVESRLSSDGVL 487
+ PEEIS K +G++ V+G+H + G+ ++F R + LPEG A +V++R+S+ G L
Sbjct: 251 YRPEEISFKVENGFVKVQGRH-VNEGPFGFELKEFRRTFTLPEGVEASNVKTRISNHGQL 309
Query: 488 SVIAPRXCPPAVEGERK 538
+ A + P GE +
Sbjct: 310 HIEAMKALPGPDGGEEE 326
Score = 43.2 bits (97), Expect = 1e-04
Identities = 22/80 (27%), Positives = 40/80 (50%)
Frame = +2
Query: 308 FAPEEISVKTADGYIVVEGKHEEKKDQHGYISRQFTRRYALPEGCTAESVESRLSSDGVL 487
F P+ I V+ ++V HE + + H Y + F R++ LP +S+ +RL +G L
Sbjct: 342 FPPDSIKVQVLGNELLVSANHEVEHEGH-YHAMHFNRQFVLPREVDMDSLTTRLDKEGKL 400
Query: 488 SVIAPRXCPPAVEGERKIPI 547
A + PA+ R++ +
Sbjct: 401 HFEAKKRNAPALPPVRELKV 420
Score = 42.7 bits (96), Expect = 2e-04
Identities = 22/80 (27%), Positives = 40/80 (50%)
Frame = +2
Query: 308 FAPEEISVKTADGYIVVEGKHEEKKDQHGYISRQFTRRYALPEGCTAESVESRLSSDGVL 487
F P+ I V+ ++V HE + + H Y + F R++ LP +S+ +RL +G L
Sbjct: 108 FPPDSIKVQVLGNELLVSANHEVEHEGH-YHAMHFNRQFVLPREVDMDSLTTRLDKEGKL 166
Query: 488 SVIAPRXCPPAVEGERKIPI 547
A + PA+ R++ +
Sbjct: 167 HFEAKKRNAPALPPVRELKL 186
>SB_3291| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 760
Score = 56.4 bits (130), Expect = 1e-08
Identities = 27/77 (35%), Positives = 46/77 (59%)
Frame = +2
Query: 308 FAPEEISVKTADGYIVVEGKHEEKKDQHGYISRQFTRRYALPEGCTAESVESRLSSDGVL 487
+ PEEIS K +G++ V+G+H + G+ ++F R + LPEG A +V++R+S+ G L
Sbjct: 17 YRPEEISFKVENGFVKVQGRH-VNEGPFGFELKEFRRTFTLPEGVEASNVKTRISNHGQL 75
Query: 488 SVIAPRXCPPAVEGERK 538
+ A + P GE +
Sbjct: 76 HIEAMKALPGPDGGEEE 92
Score = 43.2 bits (97), Expect = 1e-04
Identities = 22/80 (27%), Positives = 40/80 (50%)
Frame = +2
Query: 308 FAPEEISVKTADGYIVVEGKHEEKKDQHGYISRQFTRRYALPEGCTAESVESRLSSDGVL 487
F P+ I V+ ++V HE + + H Y + F R++ LP +S+ +RL +G L
Sbjct: 108 FPPDSIKVQVLGNELLVSANHEVEHEGH-YHAMHFNRQFVLPREVDMDSLTTRLDKEGKL 166
Query: 488 SVIAPRXCPPAVEGERKIPI 547
A + PA+ R++ +
Sbjct: 167 HFEAKKRNAPALPPVRELKV 186
>SB_49292| Best HMM Match : HSP20 (HMM E-Value=1.9e-29)
Length = 189
Score = 55.6 bits (128), Expect = 3e-08
Identities = 29/77 (37%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Frame = +2
Query: 308 FAPEEISVKTADGYIVVEGKHEEKKDQHGYISRQFTRRYALPEGCTAESVESRLSSDGVL 487
+ PEEIS K +G + V+G+H + + G+ ++F R + LPEG E+V SR+S+ G L
Sbjct: 17 YRPEEISFKVENGVVKVQGRH-VNEGEFGFELKEFRRTFTLPEGIDPENVTSRISNHGHL 75
Query: 488 SVIAPRXCP-PAVEGER 535
+ A + P P E E+
Sbjct: 76 HIEARKALPKPEAELEK 92
Score = 44.8 bits (101), Expect = 5e-05
Identities = 23/80 (28%), Positives = 40/80 (50%)
Frame = +2
Query: 308 FAPEEISVKTADGYIVVEGKHEEKKDQHGYISRQFTRRYALPEGCTAESVESRLSSDGVL 487
F PE I V+ ++V HE + + H Y + F R++ LP +S+ +RL +G L
Sbjct: 107 FPPESIKVQVLGNELLVNANHEVEHEGH-YHAMHFNRQFVLPREVDMDSLTTRLDKEGKL 165
Query: 488 SVIAPRXCPPAVEGERKIPI 547
A + PA+ R++ +
Sbjct: 166 HFEAKKSVAPALPPVRELMV 185
>SB_58906| Best HMM Match : HSP20 (HMM E-Value=3e-26)
Length = 695
Score = 53.6 bits (123), Expect = 1e-07
Identities = 27/77 (35%), Positives = 46/77 (59%)
Frame = +2
Query: 308 FAPEEISVKTADGYIVVEGKHEEKKDQHGYISRQFTRRYALPEGCTAESVESRLSSDGVL 487
+ PEEIS K +G + V+G+H + G+ ++F R + LPEG A +V++R+S+ G L
Sbjct: 18 YRPEEISFKVENGVVKVQGRH-VNEGPFGFELKEFRRTFTLPEGVEASNVKTRISNHGQL 76
Query: 488 SVIAPRXCPPAVEGERK 538
+ A + P +G +K
Sbjct: 77 HIEAMKALPEP-DGAKK 92
Score = 43.6 bits (98), Expect = 1e-04
Identities = 23/80 (28%), Positives = 40/80 (50%)
Frame = +2
Query: 308 FAPEEISVKTADGYIVVEGKHEEKKDQHGYISRQFTRRYALPEGCTAESVESRLSSDGVL 487
F PE I V+ ++V HE + + H Y + F R++ LP +S+ +RL +G L
Sbjct: 108 FPPEAIKVQVLGNELLVSANHEVEHEGH-YHAMHFNRQFILPREVDMDSLTTRLDKEGKL 166
Query: 488 SVIAPRXCPPAVEGERKIPI 547
A + PA+ R++ +
Sbjct: 167 HFEAKKRNAPALPPVRELKV 186
>SB_58907| Best HMM Match : HSP20 (HMM E-Value=4.2e-05)
Length = 259
Score = 32.3 bits (70), Expect = 0.27
Identities = 16/44 (36%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Frame = +2
Query: 308 FAPEEISVKTADGYIVVEGKHEEKKDQHGYIS-RQFTRRYALPE 436
F PEE+ VK + V + E ++HG+ + RQF R + LP+
Sbjct: 37 FKPEEVDVKVYGHELSVRARQE--CEEHGFFTARQFNRHFVLPQ 78
>SB_24406| Best HMM Match : DUF536 (HMM E-Value=1.5)
Length = 436
Score = 31.5 bits (68), Expect = 0.47
Identities = 11/22 (50%), Positives = 18/22 (81%)
Frame = +2
Query: 365 KHEEKKDQHGYISRQFTRRYAL 430
KHEE++D+HGY+ + T ++AL
Sbjct: 72 KHEEREDRHGYLKDKVTLQHAL 93
>SB_13144| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 266
Score = 30.3 bits (65), Expect = 1.1
Identities = 11/36 (30%), Positives = 19/36 (52%)
Frame = +2
Query: 329 VKTADGYIVVEGKHEEKKDQHGYISRQFTRRYALPE 436
+++A GY+V G H K + G + + R LP+
Sbjct: 10 IRSARGYVVTSGSHTSKSEVRGIMEETCSNRNPLPQ 45
>SB_13630| Best HMM Match : RVP (HMM E-Value=0.27)
Length = 373
Score = 28.7 bits (61), Expect = 3.3
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = -3
Query: 321 SSGANAGRPGLLGTYPYHFXCWTKVSSRGSK 229
SSGA+AG+PG P WT+++SR K
Sbjct: 209 SSGASAGKPG--SKSPMECTSWTQLASRKKK 237
>SB_6186| Best HMM Match : HSP20 (HMM E-Value=1.1e-06)
Length = 237
Score = 28.7 bits (61), Expect = 3.3
Identities = 16/67 (23%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Frame = +2
Query: 308 FAPEEISVKTADGYIVVEGKHEEKKDQHGYIS-RQFTRRYALPEGCTAESVESRLSSDGV 484
FA +++S++ ++++G+ +K D G+ RQF R P+ +S+++ L +
Sbjct: 109 FAAKDVSLQVDGQDLIIKGEKMDKDD--GWCKMRQFCWRRRFPKSTDMKSIKATLKYGDI 166
Query: 485 LSVIAPR 505
L + A +
Sbjct: 167 LEIEAQK 173
>SB_45576| Best HMM Match : LRR_1 (HMM E-Value=2.7e-14)
Length = 829
Score = 27.9 bits (59), Expect = 5.8
Identities = 16/53 (30%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Frame = -2
Query: 454 RFSXTALRQSVATSELTRYVTMLIFLLLVFAFNHDVAVRRFNRDF-FRGECWT 299
RF+ + S + L Y +L+F ++F +N +FNR F F+ E T
Sbjct: 303 RFTCYNVLSSYFSVTLCIYYILLVFCAVIFVYNCAWTYTKFNRPFDFKKELMT 355
>SB_16235| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4072
Score = 27.9 bits (59), Expect = 5.8
Identities = 10/30 (33%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Frame = -2
Query: 367 FAFNHDVAVRRFN-RDFFRGECWTSRFTWN 281
+ FN D+ + F+ RD + E W S++ W+
Sbjct: 3981 YGFNPDIPIYTFDGRDVIKDEKWPSKYFWH 4010
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,488,717
Number of Sequences: 59808
Number of extensions: 377350
Number of successful extensions: 957
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 891
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 952
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1264269032
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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