Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0712
(548 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g53540.1 68414.m06074 17.6 kDa class I small heat shock prote... 44 7e-05
At3g46230.1 68416.m05004 17.4 kDa class I heat shock protein (HS... 41 5e-04
At4g10250.1 68417.m01682 22.0 kDa ER small heat shock protein (H... 39 0.002
At5g59720.1 68418.m07486 18.1 kDa class I heat shock protein (HS... 39 0.003
At2g29500.1 68415.m03583 17.6 kDa class I small heat shock prote... 38 0.003
At1g07400.1 68414.m00789 17.8 kDa class I heat shock protein (HS... 36 0.018
At5g12030.1 68418.m01406 17.7 kDa class II heat shock protein 17... 35 0.041
At3g01060.3 68416.m00009 expressed protein 30 1.2
At3g01060.2 68416.m00007 expressed protein 30 1.2
At3g01060.1 68416.m00008 expressed protein 30 1.2
At2g30480.2 68415.m03713 expressed protein 30 1.2
At2g30480.1 68415.m03712 expressed protein 30 1.2
At3g63370.1 68416.m07133 pentatricopeptide (PPR) repeat-containi... 29 2.0
At5g08600.1 68418.m01023 U3 ribonucleoprotein (Utp) family prote... 29 2.7
At2g28870.1 68415.m03509 expressed protein 28 3.6
At1g48530.1 68414.m05426 hypothetical protein 28 4.7
At1g34180.1 68414.m04239 no apical meristem (NAM) family protein... 27 6.2
At4g02400.1 68417.m00324 U3 ribonucleoprotein (Utp) family prote... 27 8.3
At2g01960.1 68415.m00131 expressed protein 27 8.3
>At1g53540.1 68414.m06074 17.6 kDa class I small heat shock protein
(HSP17.6C-CI) (AA 1-156) identical to (17.6 kDa class I
heat shock protein (HSP 17.6) (AA 1-156)(SP:P13853)
(GI:4376161) (Arabidopsis thaliana) (Nucleic Acids Res.
17 (19), 7995 (1989))
Length = 157
Score = 44.0 bits (99), Expect = 7e-05
Identities = 28/80 (35%), Positives = 44/80 (55%), Gaps = 8/80 (10%)
Frame = +2
Query: 290 KPGRPAFAPEEISVKTADGYIV-VEGK----HEEKKDQHGYISR---QFTRRYALPEGCT 445
K P EE+ V+ DG I+ + G+ +EEK D+ + R +FTRR+ LPE
Sbjct: 64 KADLPGLRKEEVKVEVEDGNILQISGERSNENEEKNDKWHRVERSSGKFTRRFRLPENAK 123
Query: 446 AESVESRLSSDGVLSVIAPR 505
E +++ + +GVLSV P+
Sbjct: 124 MEEIKASM-ENGVLSVTVPK 142
>At3g46230.1 68416.m05004 17.4 kDa class I heat shock protein
(HSP17.4-CI) identical to 17.4 kDa class I heat shock
protein SP:P19036 from [Arabidopsis thaliana]
Length = 156
Score = 41.1 bits (92), Expect = 5e-04
Identities = 27/76 (35%), Positives = 41/76 (53%), Gaps = 8/76 (10%)
Frame = +2
Query: 302 PAFAPEEISVKTADGYIV-VEGK----HEEKKDQHGYISR---QFTRRYALPEGCTAESV 457
P EE+ V+ DG I+ + G+ +EEK D + R +F RR+ LPE E V
Sbjct: 67 PGLKKEEVKVEVEDGNILQISGERSSENEEKSDTWHRVERSSGKFMRRFRLPENAKVEEV 126
Query: 458 ESRLSSDGVLSVIAPR 505
++ + +GVLSV P+
Sbjct: 127 KASM-ENGVLSVTVPK 141
>At4g10250.1 68417.m01682 22.0 kDa ER small heat shock protein
(HSP22.0-ER) identical to endomembrane-localized small
heat shock protein GI:511795 from [Arabidopsis thaliana]
Length = 195
Score = 39.1 bits (87), Expect = 0.002
Identities = 28/90 (31%), Positives = 49/90 (54%), Gaps = 8/90 (8%)
Frame = +2
Query: 302 PAFAPEEISVKTAD-GYIVVEG---KHEEKK-DQHGYISR---QFTRRYALPEGCTAESV 457
P +E+ ++ + G + V G + EEKK DQ + R +F R++ LP+ ESV
Sbjct: 89 PGLKKDEVKIEVEENGVLRVSGERKREEEKKGDQWHRVERSYGKFWRQFKLPDNVDMESV 148
Query: 458 ESRLSSDGVLSVIAPRXCPPAVEGERKIPI 547
+++L +GVL++ + P V+G R + I
Sbjct: 149 KAKL-ENGVLTINLTKLSPEKVKGPRVVNI 177
>At5g59720.1 68418.m07486 18.1 kDa class I heat shock protein
(HSP18.1-CI) identical to 18.2 kDa class I heat shock
protein (HSP 18.2) (SP:P19037)[Arabidopsis thaliana];
contains Pfam profile: PF00011 Hsp20/alpha crystallin
family
Length = 161
Score = 38.7 bits (86), Expect = 0.003
Identities = 25/80 (31%), Positives = 43/80 (53%), Gaps = 8/80 (10%)
Frame = +2
Query: 290 KPGRPAFAPEEISVKTADGYIV-VEGK----HEEKKDQHGYISR---QFTRRYALPEGCT 445
K P EE+ V+ D ++ + G+ +EEK D+ + R +F RR+ LPE
Sbjct: 66 KADLPGLKKEEVKVEVEDKNVLQISGERSKENEEKNDKWHRVERASGKFMRRFRLPENAK 125
Query: 446 AESVESRLSSDGVLSVIAPR 505
E V++ + +GVL+V+ P+
Sbjct: 126 MEEVKATM-ENGVLTVVVPK 144
>At2g29500.1 68415.m03583 17.6 kDa class I small heat shock protein
(HSP17.6B-CI) contains Pfam PF00011: Hsp20/alpha
crystallin family; identified in Scharf, K-D., et al,
Cell Stress & Chaperones (2001) 6: 225-237.
Length = 153
Score = 38.3 bits (85), Expect = 0.003
Identities = 26/80 (32%), Positives = 42/80 (52%), Gaps = 8/80 (10%)
Frame = +2
Query: 290 KPGRPAFAPEEISVKTA-DGYIVVEG-KHEEKKDQHGYISR------QFTRRYALPEGCT 445
K P EE+ V+ D + + G +H EK+D++ R QFTRR+ LPE
Sbjct: 60 KADLPGLKKEEVKVEIEEDSVLKISGERHVEKEDKNDTWHRVERSSGQFTRRFRLPENVK 119
Query: 446 AESVESRLSSDGVLSVIAPR 505
+ V++ + +GVL+V P+
Sbjct: 120 MDQVKAAM-ENGVLTVTVPK 138
>At1g07400.1 68414.m00789 17.8 kDa class I heat shock protein
(HSP17.8-CI) similar to 17.5 kDa class I heat shock
protein SP:P04793 from [Glycine max]; contains Pfam
PF00011: Hsp20/alpha crystallin family
Length = 157
Score = 35.9 bits (79), Expect = 0.018
Identities = 24/80 (30%), Positives = 42/80 (52%), Gaps = 8/80 (10%)
Frame = +2
Query: 290 KPGRPAFAPEEISVKTADGYIV-VEGKH----EEKKDQHGYISR---QFTRRYALPEGCT 445
K P EE+ V+ D ++ + G+ EEK+D + R QF+R++ LPE
Sbjct: 62 KADLPGMKKEEVKVEIEDDSVLKISGERHVEKEEKQDTWHRVERSSGQFSRKFKLPENVK 121
Query: 446 AESVESRLSSDGVLSVIAPR 505
+ V++ + +GVL+V P+
Sbjct: 122 MDQVKASM-ENGVLTVTVPK 140
>At5g12030.1 68418.m01406 17.7 kDa class II heat shock protein 17.6A
(HSP17.7-CII) identical to heat shock protein 17.6A
GI:3256075 from [Arabidopsis thaliana]
Length = 156
Score = 34.7 bits (76), Expect = 0.041
Identities = 26/91 (28%), Positives = 44/91 (48%), Gaps = 9/91 (9%)
Frame = +2
Query: 302 PAFAPEEISVKTA-DGYIVVEGKHE-EKKDQHGY----ISRQ---FTRRYALPEGCTAES 454
P +EI V+ + +VV GK + + K+ G + R+ F R++ LP+ E
Sbjct: 64 PGIKGDEIQVQIENENVLVVSGKRQRDNKENEGVKFVRMERRMGKFMRKFQLPDNADLEK 123
Query: 455 VESRLSSDGVLSVIAPRXCPPAVEGERKIPI 547
+ S +DGVL V P+ PP + + I +
Sbjct: 124 I-SAACNDGVLKVTIPKLPPPEPKKPKTIQV 153
>At3g01060.3 68416.m00009 expressed protein
Length = 372
Score = 29.9 bits (64), Expect = 1.2
Identities = 12/40 (30%), Positives = 22/40 (55%)
Frame = -2
Query: 379 LLLVFAFNHDVAVRRFNRDFFRGECWTSRFTWNLSLSLXM 260
+L FA+ H + V F+R F + + W + W+ L+L +
Sbjct: 161 VLPTFAYEHKIFVGPFSRKFPKAQVWVAPRQWSWPLNLPL 200
>At3g01060.2 68416.m00007 expressed protein
Length = 442
Score = 29.9 bits (64), Expect = 1.2
Identities = 12/40 (30%), Positives = 22/40 (55%)
Frame = -2
Query: 379 LLLVFAFNHDVAVRRFNRDFFRGECWTSRFTWNLSLSLXM 260
+L FA+ H + V F+R F + + W + W+ L+L +
Sbjct: 156 VLPTFAYEHKIFVGPFSRKFPKAQVWVAPRQWSWPLNLPL 195
>At3g01060.1 68416.m00008 expressed protein
Length = 455
Score = 29.9 bits (64), Expect = 1.2
Identities = 12/40 (30%), Positives = 22/40 (55%)
Frame = -2
Query: 379 LLLVFAFNHDVAVRRFNRDFFRGECWTSRFTWNLSLSLXM 260
+L FA+ H + V F+R F + + W + W+ L+L +
Sbjct: 161 VLPTFAYEHKIFVGPFSRKFPKAQVWVAPRQWSWPLNLPL 200
>At2g30480.2 68415.m03713 expressed protein
Length = 566
Score = 29.9 bits (64), Expect = 1.2
Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +3
Query: 246 RP-WSSIXSDKDKFQVNLDVQHSPRKKSLLKRRTATSWLKANTRRRK 383
RP WSSI ++DK +L + S ++ T S + NTR+RK
Sbjct: 323 RPVWSSIVLEEDKDSHSLRSEESCSSSAVWTNETHNSQFETNTRQRK 369
>At2g30480.1 68415.m03712 expressed protein
Length = 621
Score = 29.9 bits (64), Expect = 1.2
Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +3
Query: 246 RP-WSSIXSDKDKFQVNLDVQHSPRKKSLLKRRTATSWLKANTRRRK 383
RP WSSI ++DK +L + S ++ T S + NTR+RK
Sbjct: 323 RPVWSSIVLEEDKDSHSLRSEESCSSSAVWTNETHNSQFETNTRQRK 369
>At3g63370.1 68416.m07133 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 1017
Score = 29.1 bits (62), Expect = 2.0
Identities = 12/40 (30%), Positives = 22/40 (55%)
Frame = +1
Query: 187 GPLVSREYYRPWRHLAAAARDLGPASKVIRISSK*TWTSS 306
G L+ R+ + ++ L A +RDL +K +R TW+ +
Sbjct: 879 GDLIKRKKVKAYQQLKAGSRDLDTKAKTLRCGHLDTWSQT 918
>At5g08600.1 68418.m01023 U3 ribonucleoprotein (Utp) family protein
contains Pfam profile: PF04615 Utp14 protein
Length = 822
Score = 28.7 bits (61), Expect = 2.7
Identities = 17/54 (31%), Positives = 23/54 (42%)
Frame = +2
Query: 317 EEISVKTADGYIVVEGKHEEKKDQHGYISRQFTRRYALPEGCTAESVESRLSSD 478
+EI D Y EG EE+ ++ R + L E C E+VES D
Sbjct: 48 DEIDSAYGDFYEYEEGVPEEESRKNNRYERVVNYEFELAEDCEDENVESEDDDD 101
>At2g28870.1 68415.m03509 expressed protein
Length = 156
Score = 28.3 bits (60), Expect = 3.6
Identities = 20/67 (29%), Positives = 30/67 (44%), Gaps = 8/67 (11%)
Frame = +2
Query: 368 HEEKKDQHGYISRQFTRRYALPEGCTAESVESR--------LSSDGVLSVIAPRXCPPAV 523
++E +DQ Q T + EG T + E SD +LS + PR CPPA
Sbjct: 48 YQELQDQDLEPKSQETNNCSRKEGATVKKEEEEEDDYCKTPTRSDQILSAM-PRICPPAP 106
Query: 524 EGERKIP 544
+++P
Sbjct: 107 RKPKRVP 113
>At1g48530.1 68414.m05426 hypothetical protein
Length = 164
Score = 27.9 bits (59), Expect = 4.7
Identities = 14/50 (28%), Positives = 27/50 (54%)
Frame = +2
Query: 275 G*VPSKPGRPAFAPEEISVKTADGYIVVEGKHEEKKDQHGYISRQFTRRY 424
G + + GRPAFA + +S T + +EG E +++ ++ + +RY
Sbjct: 37 GFILTSTGRPAFAHDALSSSTTQCLVGIEG-WNEFDEEYAFVYKCPVKRY 85
>At1g34180.1 68414.m04239 no apical meristem (NAM) family protein
contains Pfam PF02365: No apical meristem (NAM) domain;
similar to NAM-like protein GI:8809651 from (Arabidopsis
thaliana)
Length = 564
Score = 27.5 bits (58), Expect = 6.2
Identities = 16/50 (32%), Positives = 24/50 (48%)
Frame = +2
Query: 356 VEGKHEEKKDQHGYISRQFTRRYALPEGCTAESVESRLSSDGVLSVIAPR 505
+E E D G RQF +P+G +AE ++S L ++ I PR
Sbjct: 229 IEKLLNEIPDAPGVNQRQFDEFVGVPQGNSAEVIQSTLLNNSSGEYIDPR 278
>At4g02400.1 68417.m00324 U3 ribonucleoprotein (Utp) family protein
contains Pfam profile: PF04615 Utp14 protein
Length = 858
Score = 27.1 bits (57), Expect = 8.3
Identities = 17/50 (34%), Positives = 22/50 (44%)
Frame = +2
Query: 332 KTADGYIVVEGKHEEKKDQHGYISRQFTRRYALPEGCTAESVESRLSSDG 481
+ D Y EG EE+ ++ R Y LPE E+VES DG
Sbjct: 52 ENVDLYEYEEGVPEEESKKNNRYDRVDNYDYELPEDFEDENVESDDDEDG 101
>At2g01960.1 68415.m00131 expressed protein
Length = 260
Score = 27.1 bits (57), Expect = 8.3
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +3
Query: 165 RFSQCCSRPPCEQRILPPVASPCC 236
RF + PP ++R+LP V + CC
Sbjct: 147 RFVNSYALPPYDRRLLPSVKTGCC 170
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,078,883
Number of Sequences: 28952
Number of extensions: 251263
Number of successful extensions: 625
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 609
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 625
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1033331880
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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