Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0707
         (499 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q7RED5 Cluster: Putative uncharacterized protein PY0513...    34   2.0  
UniRef50_A3S379 Cluster: Putative uncharacterized protein; n=1; ...    32   8.2  

>UniRef50_Q7RED5 Cluster: Putative uncharacterized protein PY05130;
           n=6; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
           protein PY05130 - Plasmodium yoelii yoelii
          Length = 402

 Score = 33.9 bits (74), Expect = 2.0
 Identities = 15/26 (57%), Positives = 19/26 (73%)
 Frame = +1

Query: 61  GKCFR*XXSCDDPRISXLTSQYECXQ 138
           GKCFR   S ++ RIS LTS+Y+C Q
Sbjct: 259 GKCFRSCLSPENLRISPLTSEYKCPQ 284


>UniRef50_A3S379 Cluster: Putative uncharacterized protein; n=1;
           Prochlorococcus marinus str. MIT 9211|Rep: Putative
           uncharacterized protein - Prochlorococcus marinus str.
           MIT 9211
          Length = 872

 Score = 31.9 bits (69), Expect = 8.2
 Identities = 20/58 (34%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
 Frame = +2

Query: 182 NRTEIIFYYSMHEIFKQHF*PALSI*FVQSKIVGPPXXL--TEEHRDRILILNRRFLE 349
           N    I  ++ H++ K    P+L   FV  ++ G    +   EEH D+ILI N RF E
Sbjct: 163 NTRRYINEWTYHKLLKDEGVPSLRYKFVSLRLNGEDYGVYSIEEHFDKILIENNRFKE 220


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 427,431,738
Number of Sequences: 1657284
Number of extensions: 7346871
Number of successful extensions: 12920
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 12722
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12919
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 29273652170
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)