BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= tesS0706 (598 letters) Database: spombe 5004 sequences; 2,362,478 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SPAC1142.02c ||SPAC17G6.19c|TPR repeat protein|Schizosaccharomyc... 34 0.018 SPBC17A3.05c |||DNAJ/DUF1977 DNAJB12 homolog|Schizosaccharomyces... 33 0.024 SPBC543.02c |||DNAJ/TPR domain protein DNAJC7 family|Schizosacch... 33 0.032 SPAC23H4.14 |vam6|vps39|guanyl-nucleotide exchange factor Vma6|S... 29 0.52 SPCC645.14c |sti1||chaperone activator Sti1 |Schizosaccharomyces... 28 1.2 SPAC20H4.10 |ufd2||ubiquitin-protein ligase E4 |Schizosaccharomy... 27 2.7 SPBC119.07 |ppk19||serine/threonine protein kinase Ppk19|Schizos... 26 3.6 SPBC646.05c |erg9||squalene synthase Erg9|Schizosaccharomyces po... 26 4.8 SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual 25 8.4 SPBC31E1.04 |pep12||SNARE Pep12|Schizosaccharomyces pombe|chr 2|... 25 8.4 >SPAC1142.02c ||SPAC17G6.19c|TPR repeat protein|Schizosaccharomyces pombe|chr 1|||Manual Length = 317 Score = 33.9 bits (74), Expect = 0.018 Identities = 19/46 (41%), Positives = 28/46 (60%) Frame = +1 Query: 301 EENTTKVSESAIERAMKLKGAGNRAFHAGEYDKAIALYNEALKHAP 438 E++T V++ E A KLK GN A A +Y KA+ LY +A++ P Sbjct: 72 EDSTAHVNK---EEAEKLKLEGNNAIAAKDYQKALDLYTKAIEIDP 114 >SPBC17A3.05c |||DNAJ/DUF1977 DNAJB12 homolog|Schizosaccharomyces pombe|chr 2|||Manual Length = 403 Score = 33.5 bits (73), Expect = 0.024 Identities = 16/38 (42%), Positives = 25/38 (65%), Gaps = 1/38 (2%) Frame = +1 Query: 325 ESAIERAMKLKGAGNRAFHAGEYDKAIALYNEALK-HA 435 ES+ E A++ G + +AGEYDKA+ N++L+ HA Sbjct: 2 ESSREEALRCIGLARKYLNAGEYDKALKFANKSLRIHA 39 >SPBC543.02c |||DNAJ/TPR domain protein DNAJC7 family|Schizosaccharomyces pombe|chr 2|||Manual Length = 476 Score = 33.1 bits (72), Expect = 0.032 Identities = 23/88 (26%), Positives = 37/88 (42%), Gaps = 1/88 (1%) Frame = +1 Query: 292 LDNEENTTKVSESAIERAMKLKGAGNRAFHAGEYDKAIALYNEALKHAPQTVLSIL-LHF 468 LD + T K + + K GN F G Y A Y+EAL+ P ++ L+ Sbjct: 206 LDPDCTTAKTLFKQVRKLENTKNQGNDLFRQGNYQDAYEKYSEALQIDPDNKETVAKLYM 265 Query: 469 TKTALLVMKTRMWDKLRRLHFALKLNES 552 + +L+ R + L AL ++ S Sbjct: 266 NRATVLLRLKRPEEALSDSDNALAIDSS 293 >SPAC23H4.14 |vam6|vps39|guanyl-nucleotide exchange factor Vma6|Schizosaccharomyces pombe|chr 1|||Manual Length = 905 Score = 29.1 bits (62), Expect = 0.52 Identities = 12/29 (41%), Positives = 21/29 (72%) Frame = +1 Query: 370 RAFHAGEYDKAIALYNEALKHAPQTVLSI 456 R+F +G+YD A+ L++E + +P TVL + Sbjct: 354 RSFSSGDYDLAMRLFSE-ISESPSTVLGL 381 >SPCC645.14c |sti1||chaperone activator Sti1 |Schizosaccharomyces pombe|chr 3|||Manual Length = 591 Score = 27.9 bits (59), Expect = 1.2 Identities = 12/34 (35%), Positives = 19/34 (55%) Frame = +1 Query: 337 ERAMKLKGAGNRAFHAGEYDKAIALYNEALKHAP 438 ++A + + GN F +G++ AI Y E K AP Sbjct: 397 DKAEESRVKGNELFKSGDFANAIKEYTEMTKRAP 430 >SPAC20H4.10 |ufd2||ubiquitin-protein ligase E4 |Schizosaccharomyces pombe|chr 1|||Manual Length = 1010 Score = 26.6 bits (56), Expect = 2.7 Identities = 11/25 (44%), Positives = 17/25 (68%) Frame = -3 Query: 521 LLNLSHILVFITSRAVLVKCSKIDR 447 +LN SH+L ++ + + CSKIDR Sbjct: 385 MLNFSHVLSRLSEPFLDIGCSKIDR 409 >SPBC119.07 |ppk19||serine/threonine protein kinase Ppk19|Schizosaccharomyces pombe|chr 2|||Manual Length = 1706 Score = 26.2 bits (55), Expect = 3.6 Identities = 16/41 (39%), Positives = 25/41 (60%), Gaps = 2/41 (4%) Frame = -3 Query: 575 RSTQNALQ-LSLSF-KAKCNLLNLSHILVFITSRAVLVKCS 459 RS NAL L + F KAK N L LSH++ ++ +++C+ Sbjct: 610 RSLLNALAPLCVFFGKAKSNDLILSHLITYLNDTDWMLRCA 650 >SPBC646.05c |erg9||squalene synthase Erg9|Schizosaccharomyces pombe|chr 2|||Manual Length = 460 Score = 25.8 bits (54), Expect = 4.8 Identities = 12/41 (29%), Positives = 23/41 (56%) Frame = +2 Query: 197 IAIGLGYLYLRNRLEDPEKRKHQNLKQKRXYLWIMKKTLLR 319 + IGL L+ +++LEDP+ Q + L++ K ++R Sbjct: 183 VGIGLSRLFAQSKLEDPDLAHSQAISNSLG-LFLQKVNIIR 222 >SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual Length = 4717 Score = 25.0 bits (52), Expect = 8.4 Identities = 11/26 (42%), Positives = 17/26 (65%) Frame = +1 Query: 424 LKHAPQTVLSILLHFTKTALLVMKTR 501 ++HAP VLS+LL + LV+ +R Sbjct: 228 IEHAPSEVLSVLLPLLEKRQLVIPSR 253 >SPBC31E1.04 |pep12||SNARE Pep12|Schizosaccharomyces pombe|chr 2|||Manual Length = 317 Score = 25.0 bits (52), Expect = 8.4 Identities = 14/33 (42%), Positives = 19/33 (57%) Frame = +3 Query: 66 LTKLFTNKHSI*XLLKPSDNLRIWLLPVVHHFR 164 LTK F N+ + L S + R+W LP VH F+ Sbjct: 272 LTKHFRNRVLV--SLYVSCSSRVWSLPYVHAFK 302 Database: spombe Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 2,362,478 Number of sequences in database: 5004 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 2,256,023 Number of Sequences: 5004 Number of extensions: 43820 Number of successful extensions: 127 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 122 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 127 length of database: 2,362,478 effective HSP length: 69 effective length of database: 2,017,202 effective search space used: 260219058 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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