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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0706
         (598 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPAC1142.02c ||SPAC17G6.19c|TPR repeat protein|Schizosaccharomyc...    34   0.018
SPBC17A3.05c |||DNAJ/DUF1977 DNAJB12 homolog|Schizosaccharomyces...    33   0.024
SPBC543.02c |||DNAJ/TPR domain protein DNAJC7 family|Schizosacch...    33   0.032
SPAC23H4.14 |vam6|vps39|guanyl-nucleotide exchange factor Vma6|S...    29   0.52 
SPCC645.14c |sti1||chaperone activator Sti1 |Schizosaccharomyces...    28   1.2  
SPAC20H4.10 |ufd2||ubiquitin-protein ligase E4 |Schizosaccharomy...    27   2.7  
SPBC119.07 |ppk19||serine/threonine protein kinase Ppk19|Schizos...    26   3.6  
SPBC646.05c |erg9||squalene synthase Erg9|Schizosaccharomyces po...    26   4.8  
SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual        25   8.4  
SPBC31E1.04 |pep12||SNARE Pep12|Schizosaccharomyces pombe|chr 2|...    25   8.4  

>SPAC1142.02c ||SPAC17G6.19c|TPR repeat protein|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 317

 Score = 33.9 bits (74), Expect = 0.018
 Identities = 19/46 (41%), Positives = 28/46 (60%)
 Frame = +1

Query: 301 EENTTKVSESAIERAMKLKGAGNRAFHAGEYDKAIALYNEALKHAP 438
           E++T  V++   E A KLK  GN A  A +Y KA+ LY +A++  P
Sbjct: 72  EDSTAHVNK---EEAEKLKLEGNNAIAAKDYQKALDLYTKAIEIDP 114


>SPBC17A3.05c |||DNAJ/DUF1977 DNAJB12 homolog|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 403

 Score = 33.5 bits (73), Expect = 0.024
 Identities = 16/38 (42%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
 Frame = +1

Query: 325 ESAIERAMKLKGAGNRAFHAGEYDKAIALYNEALK-HA 435
           ES+ E A++  G   +  +AGEYDKA+   N++L+ HA
Sbjct: 2   ESSREEALRCIGLARKYLNAGEYDKALKFANKSLRIHA 39


>SPBC543.02c |||DNAJ/TPR domain protein DNAJC7
           family|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 476

 Score = 33.1 bits (72), Expect = 0.032
 Identities = 23/88 (26%), Positives = 37/88 (42%), Gaps = 1/88 (1%)
 Frame = +1

Query: 292 LDNEENTTKVSESAIERAMKLKGAGNRAFHAGEYDKAIALYNEALKHAPQTVLSIL-LHF 468
           LD +  T K     + +    K  GN  F  G Y  A   Y+EAL+  P    ++  L+ 
Sbjct: 206 LDPDCTTAKTLFKQVRKLENTKNQGNDLFRQGNYQDAYEKYSEALQIDPDNKETVAKLYM 265

Query: 469 TKTALLVMKTRMWDKLRRLHFALKLNES 552
            +  +L+   R  + L     AL ++ S
Sbjct: 266 NRATVLLRLKRPEEALSDSDNALAIDSS 293


>SPAC23H4.14 |vam6|vps39|guanyl-nucleotide exchange factor
           Vma6|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 905

 Score = 29.1 bits (62), Expect = 0.52
 Identities = 12/29 (41%), Positives = 21/29 (72%)
 Frame = +1

Query: 370 RAFHAGEYDKAIALYNEALKHAPQTVLSI 456
           R+F +G+YD A+ L++E +  +P TVL +
Sbjct: 354 RSFSSGDYDLAMRLFSE-ISESPSTVLGL 381


>SPCC645.14c |sti1||chaperone activator Sti1 |Schizosaccharomyces
           pombe|chr 3|||Manual
          Length = 591

 Score = 27.9 bits (59), Expect = 1.2
 Identities = 12/34 (35%), Positives = 19/34 (55%)
 Frame = +1

Query: 337 ERAMKLKGAGNRAFHAGEYDKAIALYNEALKHAP 438
           ++A + +  GN  F +G++  AI  Y E  K AP
Sbjct: 397 DKAEESRVKGNELFKSGDFANAIKEYTEMTKRAP 430


>SPAC20H4.10 |ufd2||ubiquitin-protein ligase E4 |Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 1010

 Score = 26.6 bits (56), Expect = 2.7
 Identities = 11/25 (44%), Positives = 17/25 (68%)
 Frame = -3

Query: 521 LLNLSHILVFITSRAVLVKCSKIDR 447
           +LN SH+L  ++   + + CSKIDR
Sbjct: 385 MLNFSHVLSRLSEPFLDIGCSKIDR 409


>SPBC119.07 |ppk19||serine/threonine protein kinase
           Ppk19|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 1706

 Score = 26.2 bits (55), Expect = 3.6
 Identities = 16/41 (39%), Positives = 25/41 (60%), Gaps = 2/41 (4%)
 Frame = -3

Query: 575 RSTQNALQ-LSLSF-KAKCNLLNLSHILVFITSRAVLVKCS 459
           RS  NAL  L + F KAK N L LSH++ ++     +++C+
Sbjct: 610 RSLLNALAPLCVFFGKAKSNDLILSHLITYLNDTDWMLRCA 650


>SPBC646.05c |erg9||squalene synthase Erg9|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 460

 Score = 25.8 bits (54), Expect = 4.8
 Identities = 12/41 (29%), Positives = 23/41 (56%)
 Frame = +2

Query: 197 IAIGLGYLYLRNRLEDPEKRKHQNLKQKRXYLWIMKKTLLR 319
           + IGL  L+ +++LEDP+    Q +      L++ K  ++R
Sbjct: 183 VGIGLSRLFAQSKLEDPDLAHSQAISNSLG-LFLQKVNIIR 222


>SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual
          Length = 4717

 Score = 25.0 bits (52), Expect = 8.4
 Identities = 11/26 (42%), Positives = 17/26 (65%)
 Frame = +1

Query: 424 LKHAPQTVLSILLHFTKTALLVMKTR 501
           ++HAP  VLS+LL   +   LV+ +R
Sbjct: 228 IEHAPSEVLSVLLPLLEKRQLVIPSR 253


>SPBC31E1.04 |pep12||SNARE Pep12|Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 317

 Score = 25.0 bits (52), Expect = 8.4
 Identities = 14/33 (42%), Positives = 19/33 (57%)
 Frame = +3

Query: 66  LTKLFTNKHSI*XLLKPSDNLRIWLLPVVHHFR 164
           LTK F N+  +   L  S + R+W LP VH F+
Sbjct: 272 LTKHFRNRVLV--SLYVSCSSRVWSLPYVHAFK 302


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,256,023
Number of Sequences: 5004
Number of extensions: 43820
Number of successful extensions: 127
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 122
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 127
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 260219058
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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