Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0706
(598 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g33400.1 68414.m04135 tetratricopeptide repeat (TPR)-containi... 36 0.027
At5g20360.1 68418.m02422 octicosapeptide/Phox/Bem1p (PB1) domain... 35 0.036
At1g04190.1 68414.m00409 tetratricopeptide repeat (TPR)-containi... 34 0.063
At3g07370.1 68416.m00879 tetratricopeptide repeat (TPR)-containi... 33 0.19
At4g32070.1 68417.m04564 octicosapeptide/Phox/Bem1p (PB1) domain... 32 0.25
At3g17970.1 68416.m02286 chloroplast outer membrane translocon s... 31 0.58
At3g58620.1 68416.m06533 tetratricopeptide repeat (TPR)-containi... 31 0.77
At5g65160.1 68418.m08195 tetratricopeptide repeat (TPR)-containi... 30 1.0
At4g12400.1 68417.m01960 stress-inducible protein, putative simi... 29 1.8
At1g56090.1 68414.m06441 tetratricopeptide repeat (TPR)-containi... 29 2.4
At1g16760.1 68414.m02013 protein kinase family protein contains ... 29 3.1
At3g14950.1 68416.m01891 tetratricopeptide repeat (TPR)-containi... 28 4.1
At1g78940.1 68414.m09203 protein kinase family protein contains ... 28 4.1
At5g09420.1 68418.m01091 chloroplast outer membrane translocon s... 28 5.4
At3g11130.1 68416.m01349 clathrin heavy chain, putative similar ... 28 5.4
At3g45060.1 68416.m04857 high-affinity nitrate transporter, puta... 27 7.2
At3g19160.1 68416.m02433 adenylate isopentenyltransferase 8 / ad... 27 7.2
At1g78120.1 68414.m09104 tetratricopeptide repeat (TPR)-containi... 27 7.2
At4g13610.1 68417.m02118 DNA (cytosine-5-)-methyltransferase, pu... 27 9.5
At3g20200.1 68416.m02560 protein kinase family protein contains ... 27 9.5
At3g08530.1 68416.m00990 clathrin heavy chain, putative similar ... 27 9.5
At1g17970.1 68414.m02223 zinc finger (C3HC4-type RING finger) fa... 27 9.5
>At1g33400.1 68414.m04135 tetratricopeptide repeat (TPR)-containing
protein contains Pfam profile PF00515 TPR Domain
Length = 798
Score = 35.5 bits (78), Expect = 0.027
Identities = 23/76 (30%), Positives = 42/76 (55%), Gaps = 6/76 (7%)
Frame = +1
Query: 337 ERAMKLKGAGNRAFHAGEYDKAIALYNEALKHAPQTVL----SIL--LHFTKTALLVMKT 498
E ++ LK GN F + ++D+A+ LY++AL+ AP + S+L L + +L
Sbjct: 61 ETSLDLKRRGNHCFRSRDFDEALRLYSKALRVAPLDAIDGDKSLLASLFLNRANVLHNLG 120
Query: 499 RMWDKLRRLHFALKLN 546
+ + LR H AL+++
Sbjct: 121 LLKESLRDCHRALRID 136
>At5g20360.1 68418.m02422 octicosapeptide/Phox/Bem1p (PB1)
domain-containing protein / tetratricopeptide repeat
(TPR)-containing protein contains Pfam profiles PF00564:
PB1 domain, PF00515: TPR Domain
Length = 809
Score = 35.1 bits (77), Expect = 0.036
Identities = 16/51 (31%), Positives = 28/51 (54%)
Frame = +1
Query: 289 SLDNEENTTKVSESAIERAMKLKGAGNRAFHAGEYDKAIALYNEALKHAPQ 441
+LD+ + + + + +A LK GN+ F +YD A+ Y EA+K P+
Sbjct: 108 TLDDCVSEVETLDDCVSKAQGLKEEGNKLFQKRDYDGAMFKYGEAIKILPK 158
>At1g04190.1 68414.m00409 tetratricopeptide repeat (TPR)-containing
protein low similarity to protein antigen LmSTI1
[Leishmania major] GI:1698880; contains Pfam profile
PF00515 TPR Domain; EST gb|Z47802 and gb|Z48402 come
from this gene
Length = 328
Score = 34.3 bits (75), Expect = 0.063
Identities = 22/70 (31%), Positives = 32/70 (45%)
Frame = +1
Query: 337 ERAMKLKGAGNRAFHAGEYDKAIALYNEALKHAPQTVLSILLHFTKTALLVMKTRMWDKL 516
E LK GN F AG + KA ALY +A+K P + L+ + A + ++ L
Sbjct: 13 EAEKSLKEKGNEFFKAGNFLKAAALYTQAIKLDPS---NATLYSNRAAAFLSLVKLSKAL 69
Query: 517 RRLHFALKLN 546
+KLN
Sbjct: 70 ADAETTIKLN 79
>At3g07370.1 68416.m00879 tetratricopeptide repeat (TPR)-containing
protein / U-box domain-containing protein similar to
serologically defined colon cancer antigen 7 GB:5031963
GI:3170178 [Homo sapiens];
Length = 278
Score = 32.7 bits (71), Expect = 0.19
Identities = 29/94 (30%), Positives = 46/94 (48%), Gaps = 3/94 (3%)
Frame = +1
Query: 319 VSESAIERAMKLKGAGNRAFHAGEYDKAIALYNEALKHAPQTVLSILLHFTKTALLVMKT 498
V+ A A +LK GN F + AI Y EA+ +P ++ ++T AL MK
Sbjct: 2 VTGVASAMAERLKEDGNNCFKKERFGAAIDAYTEAIALSP----NVPAYWTNRALCHMKR 57
Query: 499 RMWDKLRR-LHFALKL-NESCKA-FCVDLVLRKK 591
+ W K+ A++L + S KA + + L L +K
Sbjct: 58 KDWTKVEEDCRKAIQLVHNSVKAHYMLGLALLQK 91
>At4g32070.1 68417.m04564 octicosapeptide/Phox/Bem1p (PB1)
domain-containing protein / tetratricopeptide repeat
(TPR)-containing protein similar to SP|Q99614
Tetratricopeptide repeat protein 1 {Homo sapiens};
contains Pfam profiles PF00564: PB1 domain, PF00515: TPR
Domain
Length = 811
Score = 32.3 bits (70), Expect = 0.25
Identities = 17/57 (29%), Positives = 31/57 (54%)
Frame = +1
Query: 325 ESAIERAMKLKGAGNRAFHAGEYDKAIALYNEALKHAPQTVLSILLHFTKTALLVMK 495
E I RA++LK GN+ F +++ A+ +++ALK P+ + + T A M+
Sbjct: 45 EIFISRALELKEEGNKLFQKRDHEGAMLSFDKALKLLPKDHIDVAYLRTSMASCYMQ 101
>At3g17970.1 68416.m02286 chloroplast outer membrane translocon
subunit, putative similar to Toc64 [Pisum sativum]
GI:7453538; contains Pfam profile PF00515 TPR Domain
Length = 589
Score = 31.1 bits (67), Expect = 0.58
Identities = 17/47 (36%), Positives = 27/47 (57%)
Frame = +1
Query: 289 SLDNEENTTKVSESAIERAMKLKGAGNRAFHAGEYDKAIALYNEALK 429
S+ + ++K + + E A K GN+AF + KAI LY+EA+K
Sbjct: 456 SIVTDPKSSKKAITKEESAEIAKEKGNQAFKEKLWQKAIGLYSEAIK 502
>At3g58620.1 68416.m06533 tetratricopeptide repeat (TPR)-containing
protein contains Pfam profile PF00515 TPR Domain
Length = 682
Score = 30.7 bits (66), Expect = 0.77
Identities = 12/31 (38%), Positives = 21/31 (67%)
Frame = +1
Query: 349 KLKGAGNRAFHAGEYDKAIALYNEALKHAPQ 441
++K AGN + G Y +A+ALY+ A+ +P+
Sbjct: 213 EVKKAGNVMYRKGNYAEALALYDRAISLSPE 243
Score = 30.3 bits (65), Expect = 1.0
Identities = 22/84 (26%), Positives = 38/84 (45%), Gaps = 2/84 (2%)
Frame = +1
Query: 268 LKAKTTXSLDNEENTTKVSE-SAIERAMKLKGAGNRAFHAGEYDKAIALYNEALK-HAPQ 441
+K + ++D+ + VS + ++ K + GN F +G Y +A Y + LK A
Sbjct: 423 VKVERAMTIDHSNSPEVVSVLNNVKNVAKARTRGNELFSSGRYSEASVAYGDGLKLDAFN 482
Query: 442 TVLSILLHFTKTALLVMKTRMWDK 513
+VL + A K MW+K
Sbjct: 483 SVL-----YCNRAACWFKLGMWEK 501
>At5g65160.1 68418.m08195 tetratricopeptide repeat (TPR)-containing
protein contains Pfam profile PF00515 TPR Domain
Length = 593
Score = 30.3 bits (65), Expect = 1.0
Identities = 17/55 (30%), Positives = 26/55 (47%)
Frame = +1
Query: 298 NEENTTKVSESAIERAMKLKGAGNRAFHAGEYDKAIALYNEALKHAPQTVLSILL 462
N +S A + + + GN F +G + +A A Y E L H P+ S+LL
Sbjct: 456 NNREVIMISRRA-QAVTEARFKGNELFKSGRFQEACAAYGEGLDHDPRN--SVLL 507
>At4g12400.1 68417.m01960 stress-inducible protein, putative similar
to sti (stress inducible protein) [Glycine max]
GI:872116; contains Pfam profile PF00515 TPR Domain
Length = 530
Score = 29.5 bits (63), Expect = 1.8
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = +1
Query: 376 FHAGEYDKAIALYNEALKHAPQ 441
F EYDKA+ Y E LKH P+
Sbjct: 448 FFMKEYDKAMETYQEGLKHDPK 469
>At1g56090.1 68414.m06441 tetratricopeptide repeat (TPR)-containing
protein contains Pfam profile PF00515 TPR Domain;
similar to infertility-related sperm protein [Homo
sapiens] GI:10863768, TPR-containing protein involved in
spermatogenesis TPIS [Mus musculus] GI:6272680
Length = 272
Score = 29.1 bits (62), Expect = 2.4
Identities = 16/51 (31%), Positives = 27/51 (52%)
Frame = +1
Query: 328 SAIERAMKLKGAGNRAFHAGEYDKAIALYNEALKHAPQTVLSILLHFTKTA 480
SA+ + K++ G++ + G+Y +A+ Y EAL A I LH + A
Sbjct: 3 SAVTASGKVE-KGHQLYRDGKYKEALLFYTEALTAAKAKPQKIALHSNRAA 52
>At1g16760.1 68414.m02013 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 758
Score = 28.7 bits (61), Expect = 3.1
Identities = 17/43 (39%), Positives = 23/43 (53%)
Frame = +2
Query: 146 GSTPFPKWQLAILLGAPIAIGLGYLYLRNRLEDPEKRKHQNLK 274
G+TP WQL + A IA GL +L+ PE H++LK
Sbjct: 536 GNTPPISWQLRFRIAAEIATGLLFLHQTK----PEPIVHRDLK 574
>At3g14950.1 68416.m01891 tetratricopeptide repeat (TPR)-containing
protein low similarity to SP|Q99615 DnaJ homolog
subfamily C member 7 (Tetratricopeptide repeat protein
2) {Homo sapiens}; contains Pfam profile PF00515: TPR
Domain
Length = 721
Score = 28.3 bits (60), Expect = 4.1
Identities = 16/66 (24%), Positives = 33/66 (50%)
Frame = +1
Query: 349 KLKGAGNRAFHAGEYDKAIALYNEALKHAPQTVLSILLHFTKTALLVMKTRMWDKLRRLH 528
++K GN F G + +A+ LY+ A++ +P + H + A L ++ + +
Sbjct: 260 EVKRFGNEMFRKGCFAEALKLYDRAIELSPS---NATYHSNRAAALSSLGQIGEAVNECE 316
Query: 529 FALKLN 546
A+KL+
Sbjct: 317 IAIKLD 322
>At1g78940.1 68414.m09203 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 680
Score = 28.3 bits (60), Expect = 4.1
Identities = 17/43 (39%), Positives = 23/43 (53%)
Frame = +2
Query: 146 GSTPFPKWQLAILLGAPIAIGLGYLYLRNRLEDPEKRKHQNLK 274
G+TP WQL + A IA GL +L+ PE H++LK
Sbjct: 463 GNTPPITWQLRFRIAAEIATGLLFLHQTK----PEPIVHRDLK 501
>At5g09420.1 68418.m01091 chloroplast outer membrane translocon
subunit, putative similar to component of chloroplast
outer membrane translocon Toc64 [Pisum sativum]
GI:7453538; contains Pfam profiles PF01425: Amidase,
PF00515: TPR Domain
Length = 603
Score = 27.9 bits (59), Expect = 5.4
Identities = 11/32 (34%), Positives = 20/32 (62%)
Frame = +1
Query: 334 IERAMKLKGAGNRAFHAGEYDKAIALYNEALK 429
+E + +K GN A+ +++KA+ Y EA+K
Sbjct: 485 MEASEVMKEKGNAAYKGKQWNKAVNFYTEAIK 516
>At3g11130.1 68416.m01349 clathrin heavy chain, putative similar to
Swiss-Prot:Q00610 clathrin heavy chain 1 (CLH-17) [Homo
sapiens]
Length = 1705
Score = 27.9 bits (59), Expect = 5.4
Identities = 18/59 (30%), Positives = 32/59 (54%), Gaps = 4/59 (6%)
Frame = +1
Query: 409 LYNEALKHAPQTVLSILLHFTKTALLVMKTRMW----DKLRRLHFALKLNESCKAFCVD 573
LY+EAL A + + + + ++ K A+ ++K + + D R+ + A E C A CVD
Sbjct: 1219 LYDEALYEAAKIIYAFISNWAKLAVTLVKLQQFQGAVDAARKANSAKTWKEVCFA-CVD 1276
>At3g45060.1 68416.m04857 high-affinity nitrate transporter,
putative similar to trans-membrane nitrate transporter
protein AtNRT2:1 [Arabidopsis thaliana] GI:3747058,
high-affinity nitrate transporter ACH1 [Arabidopsis
thaliana] GI:3608362
Length = 542
Score = 27.5 bits (58), Expect = 7.2
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +2
Query: 125 FEDMASTGSTPFPKWQLAILLGAPIAIGLGYLYL 226
F + TG+TPF W+ A + + I +G L L
Sbjct: 220 FHVIKLTGATPFTAWRFAFFIPGILQIVMGILVL 253
>At3g19160.1 68416.m02433 adenylate isopentenyltransferase 8 /
adenylate dimethylallyltransferase / cytokinin synthase
(IPT8) identical to adenylate isopentenyltransferase
(IPT8) [Arabidopsis thaliana] GI:14279068
Length = 330
Score = 27.5 bits (58), Expect = 7.2
Identities = 11/22 (50%), Positives = 17/22 (77%)
Frame = +1
Query: 301 EENTTKVSESAIERAMKLKGAG 366
+ENT ++++ IER MKLK +G
Sbjct: 268 KENTWRLAKKQIERIMKLKSSG 289
>At1g78120.1 68414.m09104 tetratricopeptide repeat (TPR)-containing
protein low similarity to SP|Q99615 DnaJ homolog
subfamily C member 7 (Tetratricopeptide repeat protein
2) {Homo sapiens}; contains Pfam profile PF00515: TPR
Domain
Length = 530
Score = 27.5 bits (58), Expect = 7.2
Identities = 18/65 (27%), Positives = 29/65 (44%)
Frame = +1
Query: 352 LKGAGNRAFHAGEYDKAIALYNEALKHAPQTVLSILLHFTKTALLVMKTRMWDKLRRLHF 531
LK GN + G + +A+ Y A+ P+T K+A L+ R+ +
Sbjct: 162 LKKMGNEEYCRGRFGQALVFYERAISADPKTP---TYWSNKSAALISLGRLLEASDACEE 218
Query: 532 ALKLN 546
AL+LN
Sbjct: 219 ALRLN 223
>At4g13610.1 68417.m02118 DNA (cytosine-5-)-methyltransferase,
putative similar to cytosine-5 methyltransferase (METII)
[Arabidopsis thaliana] GI:6523846; contains Pfam profiles
PF01426: BAH domain, PF00145: C-5 cytosine-specific DNA
methylase
Length = 1404
Score = 27.1 bits (57), Expect = 9.5
Identities = 17/62 (27%), Positives = 28/62 (45%), Gaps = 1/62 (1%)
Frame = -3
Query: 539 FKAKCN-LLNLSHILVFITSRAVLVKCSKIDRTVWGACFNASLYKAMALSYSPA*KARLP 363
F CN +L +S + + I RA++ KC +D C + + +A K+ LP
Sbjct: 1017 FVDNCNVILRISWLRLLINDRAIMEKCGDVD-----DCISTTEAAELATKLDENQKSTLP 1071
Query: 362 AP 357
P
Sbjct: 1072 LP 1073
>At3g20200.1 68416.m02560 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 780
Score = 27.1 bits (57), Expect = 9.5
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = +2
Query: 146 GSTPFPKWQLAILLGAPIAIGLGYLYLRNRLEDPEKRKHQNLK 274
G+TP W+L + A +A GL +L+ PE H++LK
Sbjct: 539 GNTPPLSWELRFRIAAEVATGLLFLHQTK----PEPIVHRDLK 577
>At3g08530.1 68416.m00990 clathrin heavy chain, putative similar to
Swiss-Prot:Q00610 clathrin heavy chain 1 (CLH-17) [Homo
sapiens]
Length = 1703
Score = 27.1 bits (57), Expect = 9.5
Identities = 18/59 (30%), Positives = 32/59 (54%), Gaps = 4/59 (6%)
Frame = +1
Query: 409 LYNEALKHAPQTVLSILLHFTKTALLVMKTRMW----DKLRRLHFALKLNESCKAFCVD 573
LY+EAL A + + + + ++ K A+ ++K + + D R+ + A E C A CVD
Sbjct: 1219 LYDEALYEAAKIIYAFISNWGKLAVTLVKLQQFQGAVDAARKANSAKTWKEVCFA-CVD 1276
>At1g17970.1 68414.m02223 zinc finger (C3HC4-type RING finger)
family protein similar to Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 368
Score = 27.1 bits (57), Expect = 9.5
Identities = 8/13 (61%), Positives = 11/13 (84%)
Frame = -1
Query: 436 GHASMLHCIKQWL 398
GH+ +HC+KQWL
Sbjct: 339 GHSFHVHCVKQWL 351
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,837,413
Number of Sequences: 28952
Number of extensions: 233494
Number of successful extensions: 691
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 672
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 691
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1190791976
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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