Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0702
         (499 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855488-1|ABH88175.1|  112|Tribolium castaneum chemosensory pro...    92   3e-21
DQ855491-1|ABH88178.1|  144|Tribolium castaneum chemosensory pro...    44   1e-06
DQ855494-1|ABH88181.1|   99|Tribolium castaneum chemosensory pro...    43   1e-06
DQ855505-1|ABH88192.1|  119|Tribolium castaneum chemosensory pro...    31   0.008
DQ855498-1|ABH88185.1|  127|Tribolium castaneum chemosensory pro...    27   0.071
AJ973445-1|CAJ01492.1|  127|Tribolium castaneum hypothetical pro...    27   0.071
DQ855490-1|ABH88177.1|  133|Tribolium castaneum chemosensory pro...    26   0.16 
DQ855497-1|ABH88184.1|  127|Tribolium castaneum chemosensory pro...    24   0.66 
AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.          23   2.0  
DQ494421-1|ABF55372.1|   73|Tribolium castaneum telomerase rever...    21   4.7  
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    21   4.7  

>DQ855488-1|ABH88175.1|  112|Tribolium castaneum chemosensory
           protein 1 protein.
          Length = 112

 Score = 91.9 bits (218), Expect = 3e-21
 Identities = 37/68 (54%), Positives = 52/68 (76%)
 Frame = +3

Query: 222 RHNAKTSQMCTGEGPCDMVGRRLRTLAPFVLRGACPQCSVQESRHIRRTLAYIQRNYPWE 401
           R+  +  +  TGE PCD VGRRL++LAP VLRG+CPQC+ QE + I++ LA++Q+NYP E
Sbjct: 43  RYLLRQLKCATGEAPCDPVGRRLKSLAPLVLRGSCPQCTPQEMKQIQKVLAFVQKNYPKE 102

Query: 402 WARIVRQY 425
           W +I+ QY
Sbjct: 103 WNKILHQY 110


>DQ855491-1|ABH88178.1|  144|Tribolium castaneum chemosensory
           protein 5 protein.
          Length = 144

 Score = 43.6 bits (98), Expect = 1e-06
 Identities = 18/56 (32%), Positives = 30/56 (53%)
 Frame = +3

Query: 258 EGPCDMVGRRLRTLAPFVLRGACPQCSVQESRHIRRTLAYIQRNYPWEWARIVRQY 425
           +GPC   GR L+ + P  L   C +CS  + +   + L ++  NY  EW ++V +Y
Sbjct: 63  KGPCSPEGRELKKILPDALVTNCSKCSEVQKKQAGKILTFVLLNYRNEWNQLVAKY 118


>DQ855494-1|ABH88181.1|   99|Tribolium castaneum chemosensory
           protein 8 protein.
          Length = 99

 Score = 43.2 bits (97), Expect = 1e-06
 Identities = 15/56 (26%), Positives = 31/56 (55%)
 Frame = +3

Query: 258 EGPCDMVGRRLRTLAPFVLRGACPQCSVQESRHIRRTLAYIQRNYPWEWARIVRQY 425
           + PCD +G +++   P ++   C +C  ++  + RR   Y+Q  +P  W  +V++Y
Sbjct: 42  KAPCDALGNQIKGALPEIIGKNCERCDSRQVANARRIARYVQTKHPDVWNALVKKY 97



 Score = 23.0 bits (47), Expect = 1.5
 Identities = 13/38 (34%), Positives = 19/38 (50%)
 Frame = +1

Query: 154 LVLTVLAAPQMSDAQLEKTLADKGTMQRHLRCALVKVP 267
           LV+ VL    +   Q +  LA    +++ L CAL K P
Sbjct: 7   LVVVVLLIGVVYQVQGQLGLAGNNYIEKQLLCALDKAP 44


>DQ855505-1|ABH88192.1|  119|Tribolium castaneum chemosensory
           protein 19 protein.
          Length = 119

 Score = 30.7 bits (66), Expect = 0.008
 Identities = 11/55 (20%), Positives = 24/55 (43%)
 Frame = +3

Query: 261 GPCDMVGRRLRTLAPFVLRGACPQCSVQESRHIRRTLAYIQRNYPWEWARIVRQY 425
           G C      L+ + P  L+  C +CS ++    ++ + ++  N    W  +  +Y
Sbjct: 49  GACTPDADELKRVLPDALKSDCAKCSEKQKEMTKKVIHFLSHNKQQMWKELTAKY 103


>DQ855498-1|ABH88185.1|  127|Tribolium castaneum chemosensory
           protein 12 protein.
          Length = 127

 Score = 27.5 bits (58), Expect = 0.071
 Identities = 13/55 (23%), Positives = 25/55 (45%)
 Frame = +3

Query: 261 GPCDMVGRRLRTLAPFVLRGACPQCSVQESRHIRRTLAYIQRNYPWEWARIVRQY 425
           G C   G+ L+      L+ +C +CS ++    R  + Y+ +N    W  +  +Y
Sbjct: 52  GKCSPDGQELKNNLADALQTSCSKCSQRQKDGSRTIIRYLIKNKRDWWNELEAKY 106


>AJ973445-1|CAJ01492.1|  127|Tribolium castaneum hypothetical
           protein protein.
          Length = 127

 Score = 27.5 bits (58), Expect = 0.071
 Identities = 13/55 (23%), Positives = 25/55 (45%)
 Frame = +3

Query: 261 GPCDMVGRRLRTLAPFVLRGACPQCSVQESRHIRRTLAYIQRNYPWEWARIVRQY 425
           G C   G+ L+      L+ +C +CS ++    R  + Y+ +N    W  +  +Y
Sbjct: 52  GKCSPDGQELKNNLADALQTSCSKCSQRQQDGSRTIIRYLIKNKRDWWNELEAKY 106


>DQ855490-1|ABH88177.1|  133|Tribolium castaneum chemosensory
           protein 4 protein.
          Length = 133

 Score = 26.2 bits (55), Expect = 0.16
 Identities = 13/56 (23%), Positives = 23/56 (41%)
 Frame = +3

Query: 258 EGPCDMVGRRLRTLAPFVLRGACPQCSVQESRHIRRTLAYIQRNYPWEWARIVRQY 425
           +G C   G  L+   P  +   C +CS ++       + Y+  N P  W  +  +Y
Sbjct: 55  KGRCSPDGLELKKNMPDAIETDCSKCSEKQKEGSDFIMRYLIDNKPDYWKALEAKY 110


>DQ855497-1|ABH88184.1|  127|Tribolium castaneum chemosensory
           protein 11 protein.
          Length = 127

 Score = 24.2 bits (50), Expect = 0.66
 Identities = 13/57 (22%), Positives = 23/57 (40%), Gaps = 1/57 (1%)
 Frame = +3

Query: 258 EGPCDMVGRRLRTLAPFVLRGACPQCSVQESRHIRRTLAY-IQRNYPWEWARIVRQY 425
           +G C   G  L+   P  L   C +CS  +    ++ + + I     W W  +  +Y
Sbjct: 53  KGKCTPDGAELKRHLPDALHTECSKCSETQKNGSKKIMRHLIDHKRDW-WNELEEKY 108


>AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.
          Length = 292

 Score = 22.6 bits (46), Expect = 2.0
 Identities = 8/15 (53%), Positives = 8/15 (53%)
 Frame = +3

Query: 141 CMYVSRFNCVGGTAD 185
           C Y    NCVGG  D
Sbjct: 253 CQYYQGKNCVGGKVD 267


>DQ494421-1|ABF55372.1|   73|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 73

 Score = 21.4 bits (43), Expect = 4.7
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +2

Query: 179 RRCRMHN*KKPLLIKAQCKDI 241
           R C+ H  KKP+ I A  ++I
Sbjct: 35  RLCKKHKTKKPVQILALLQEI 55


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 21.4 bits (43), Expect = 4.7
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +2

Query: 179 RRCRMHN*KKPLLIKAQCKDI 241
           R C+ H  KKP+ I A  ++I
Sbjct: 35  RLCKKHKTKKPVQILALLQEI 55


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 123,597
Number of Sequences: 336
Number of extensions: 2864
Number of successful extensions: 13
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11735024
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)