Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0702
         (499 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC039004-1|AAH39004.1|  612|Homo sapiens carnitine O-octanoyltra...    33   0.55 
AF168793-1|AAF03234.1|  612|Homo sapiens peroxisomal carnitine o...    33   0.55 
AF073770-1|AAD41654.1|  612|Homo sapiens carnitine octanoyltrans...    33   0.55 
D87443-1|BAA13384.2| 1009|Homo sapiens KIAA0254 protein.               30   5.1  
BC031620-1|AAH31620.1|  803|Homo sapiens SNX19 protein protein.        30   5.1  
AF395843-1|AAK73124.1|  992|Homo sapiens SNX19 protein.                30   5.1  

>BC039004-1|AAH39004.1|  612|Homo sapiens carnitine
           O-octanoyltransferase protein.
          Length = 612

 Score = 33.1 bits (72), Expect = 0.55
 Identities = 20/55 (36%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
 Frame = -1

Query: 298 NVLNLLPTISQGPSPVHI*DVFALCLYQQGFFLIVHPTSAV-PPTQLKRDTYIHQ 137
           +++N   T S+G SP HI     LC  +   F ++H    V PP  L++ TYIH+
Sbjct: 175 SIMNYFRTESEGRSPNHI---VVLCRGRAFVFDVIHEGCLVTPPELLRQLTYIHK 226


>AF168793-1|AAF03234.1|  612|Homo sapiens peroxisomal carnitine
           octanoyltransferase protein.
          Length = 612

 Score = 33.1 bits (72), Expect = 0.55
 Identities = 20/55 (36%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
 Frame = -1

Query: 298 NVLNLLPTISQGPSPVHI*DVFALCLYQQGFFLIVHPTSAV-PPTQLKRDTYIHQ 137
           +++N   T S+G SP HI     LC  +   F ++H    V PP  L++ TYIH+
Sbjct: 175 SIMNYFRTESEGRSPNHI---VVLCRGRAFVFDVIHEGCLVTPPELLRQLTYIHK 226


>AF073770-1|AAD41654.1|  612|Homo sapiens carnitine
           octanoyltransferase protein.
          Length = 612

 Score = 33.1 bits (72), Expect = 0.55
 Identities = 20/55 (36%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
 Frame = -1

Query: 298 NVLNLLPTISQGPSPVHI*DVFALCLYQQGFFLIVHPTSAV-PPTQLKRDTYIHQ 137
           +++N   T S+G SP HI     LC  +   F ++H    V PP  L++ TYIH+
Sbjct: 175 SIMNYFRTESEGRSPNHI---VVLCRGRAFVFDVIHEGCLVTPPELLRQLTYIHK 226


>D87443-1|BAA13384.2| 1009|Homo sapiens KIAA0254 protein.
          Length = 1009

 Score = 29.9 bits (64), Expect = 5.1
 Identities = 15/45 (33%), Positives = 19/45 (42%)
 Frame = +3

Query: 288 LRTLAPFVLRGACPQCSVQESRHIRRTLAYIQRNYPWEWARIVRQ 422
           L    P      CP+   Q  R I RT+  I R++   W R V Q
Sbjct: 96  LERFIPLATCPPCPEAERQLEREINRTIQMIIRDFVLSWYRSVSQ 140


>BC031620-1|AAH31620.1|  803|Homo sapiens SNX19 protein protein.
          Length = 803

 Score = 29.9 bits (64), Expect = 5.1
 Identities = 15/45 (33%), Positives = 19/45 (42%)
 Frame = +3

Query: 288 LRTLAPFVLRGACPQCSVQESRHIRRTLAYIQRNYPWEWARIVRQ 422
           L    P      CP+   Q  R I RT+  I R++   W R V Q
Sbjct: 79  LERFIPLATCPPCPEAERQLEREINRTIQMIIRDFVLSWYRSVSQ 123


>AF395843-1|AAK73124.1|  992|Homo sapiens SNX19 protein.
          Length = 992

 Score = 29.9 bits (64), Expect = 5.1
 Identities = 15/45 (33%), Positives = 19/45 (42%)
 Frame = +3

Query: 288 LRTLAPFVLRGACPQCSVQESRHIRRTLAYIQRNYPWEWARIVRQ 422
           L    P      CP+   Q  R I RT+  I R++   W R V Q
Sbjct: 79  LERFIPLATCPPCPEAERQLEREINRTIQMIIRDFVLSWYRSVSQ 123


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 74,711,121
Number of Sequences: 237096
Number of extensions: 1645708
Number of successful extensions: 2769
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2693
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2769
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4536472160
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)