Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0702
         (499 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855483-1|ABH88170.1|  117|Apis mellifera chemosensory protein ...    93   1e-21
AJ973398-1|CAJ01445.1|  117|Apis mellifera hypothetical protein ...    93   1e-21
DQ855486-1|ABH88173.1|  104|Apis mellifera chemosensory protein ...    53   1e-09
DQ855485-1|ABH88172.1|  128|Apis mellifera chemosensory protein ...    30   0.012
AJ973400-1|CAJ01447.1|  128|Apis mellifera hypothetical protein ...    30   0.012
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             23   2.3  
DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor pr...    21   9.4  
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    21   9.4  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    21   9.4  

>DQ855483-1|ABH88170.1|  117|Apis mellifera chemosensory protein 2
           protein.
          Length = 117

 Score = 93.5 bits (222), Expect = 1e-21
 Identities = 39/68 (57%), Positives = 53/68 (77%)
 Frame = +3

Query: 222 RHNAKTSQMCTGEGPCDMVGRRLRTLAPFVLRGACPQCSVQESRHIRRTLAYIQRNYPWE 401
           R+  +  +   GE PCD VGRRL++LAP VLRGACPQCS +E+R I++ L++IQR YP E
Sbjct: 46  RYLRRQLKCALGEAPCDPVGRRLKSLAPLVLRGACPQCSPEETRQIKKVLSHIQRTYPKE 105

Query: 402 WARIVRQY 425
           W++IV+QY
Sbjct: 106 WSKIVQQY 113


>AJ973398-1|CAJ01445.1|  117|Apis mellifera hypothetical protein
           protein.
          Length = 117

 Score = 93.5 bits (222), Expect = 1e-21
 Identities = 39/68 (57%), Positives = 53/68 (77%)
 Frame = +3

Query: 222 RHNAKTSQMCTGEGPCDMVGRRLRTLAPFVLRGACPQCSVQESRHIRRTLAYIQRNYPWE 401
           R+  +  +   GE PCD VGRRL++LAP VLRGACPQCS +E+R I++ L++IQR YP E
Sbjct: 46  RYLRRQLKCALGEAPCDPVGRRLKSLAPLVLRGACPQCSPEETRQIKKVLSHIQRTYPKE 105

Query: 402 WARIVRQY 425
           W++IV+QY
Sbjct: 106 WSKIVQQY 113


>DQ855486-1|ABH88173.1|  104|Apis mellifera chemosensory protein 5
           protein.
          Length = 104

 Score = 53.2 bits (122), Expect = 1e-09
 Identities = 19/55 (34%), Positives = 36/55 (65%)
 Frame = +3

Query: 261 GPCDMVGRRLRTLAPFVLRGACPQCSVQESRHIRRTLAYIQRNYPWEWARIVRQY 425
           G CD++G++++ L P VL   C +C+ ++       + ++Q+NYP+EW  I+R+Y
Sbjct: 44  GHCDVIGKKIKELLPEVLNNHCNRCTSRQIGIANTLIPFMQQNYPYEWQLILRRY 98


>DQ855485-1|ABH88172.1|  128|Apis mellifera chemosensory protein 4
           protein.
          Length = 128

 Score = 30.3 bits (65), Expect = 0.012
 Identities = 13/56 (23%), Positives = 24/56 (42%)
 Frame = +3

Query: 258 EGPCDMVGRRLRTLAPFVLRGACPQCSVQESRHIRRTLAYIQRNYPWEWARIVRQY 425
           +GPC      L+   P  L   C  CS ++ +   + + ++  N P  W  +  +Y
Sbjct: 53  QGPCTPDAAELKRNLPDALENECSPCSEKQKKIADKVVQFLIDNKPEIWVLLEAKY 108


>AJ973400-1|CAJ01447.1|  128|Apis mellifera hypothetical protein
           protein.
          Length = 128

 Score = 30.3 bits (65), Expect = 0.012
 Identities = 13/56 (23%), Positives = 24/56 (42%)
 Frame = +3

Query: 258 EGPCDMVGRRLRTLAPFVLRGACPQCSVQESRHIRRTLAYIQRNYPWEWARIVRQY 425
           +GPC      L+   P  L   C  CS ++ +   + + ++  N P  W  +  +Y
Sbjct: 53  QGPCTPDAAELKRNLPDALENECSPCSEKQKKIADKVVQFLIDNKPEIWVLLEAKY 108


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 22.6 bits (46), Expect = 2.3
 Identities = 11/23 (47%), Positives = 13/23 (56%), Gaps = 1/23 (4%)
 Frame = +3

Query: 324 CPQCS-VQESRHIRRTLAYIQRN 389
           CP    +QE RHIRR L    +N
Sbjct: 4   CPYARCIQERRHIRRELLRWTKN 26


>DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor
           protein.
          Length = 459

 Score = 20.6 bits (41), Expect = 9.4
 Identities = 5/12 (41%), Positives = 8/12 (66%)
 Frame = +3

Query: 369 LAYIQRNYPWEW 404
           L+   + YPW+W
Sbjct: 91  LSVFWQQYPWQW 102


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 20.6 bits (41), Expect = 9.4
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +1

Query: 157 VLTVLAAPQMSDAQLEKTLADK 222
           +L +   PQ+S A   K L+DK
Sbjct: 88  LLRLFHIPQISPASTAKALSDK 109


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 20.6 bits (41), Expect = 9.4
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +1

Query: 157 VLTVLAAPQMSDAQLEKTLADK 222
           +L +   PQ+S A   K L+DK
Sbjct: 178 LLRLFHIPQISPASTAKALSDK 199


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 149,157
Number of Sequences: 438
Number of extensions: 3258
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 13618701
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)