Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0700
         (548 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT023791-1|AAZ41800.1|  948|Drosophila melanogaster GH14566p pro...    30   2.4  
AJ556816-1|CAD89221.1|  949|Drosophila melanogaster SMG6 protein...    30   2.4  
AE014297-3688|AAF56380.2|  948|Drosophila melanogaster CG6369-PA...    30   2.4  

>BT023791-1|AAZ41800.1|  948|Drosophila melanogaster GH14566p
           protein.
          Length = 948

 Score = 29.9 bits (64), Expect = 2.4
 Identities = 15/78 (19%), Positives = 37/78 (47%)
 Frame = -1

Query: 416 YIYCQLAIDLHLMTIEQIFFNIRFVSICCYFFS*IICRIRNHLRQRKTRSVIRDNATLLK 237
           YI+ QL      + +EQ+ F      +  +F+  +   +RN+L++++T         L++
Sbjct: 195 YIHDQLQDAFKQLLLEQLKFVCEH-KVDVFFWKLLFYNVRNYLKRQQTDQAHTHTLLLIE 253

Query: 236 PSLKYYLFFFTTIFVAMI 183
            ++K+Y   +  +    +
Sbjct: 254 QAIKFYRMLYDKLMAKCV 271


>AJ556816-1|CAD89221.1|  949|Drosophila melanogaster SMG6 protein
           protein.
          Length = 949

 Score = 29.9 bits (64), Expect = 2.4
 Identities = 15/78 (19%), Positives = 37/78 (47%)
 Frame = -1

Query: 416 YIYCQLAIDLHLMTIEQIFFNIRFVSICCYFFS*IICRIRNHLRQRKTRSVIRDNATLLK 237
           YI+ QL      + +EQ+ F      +  +F+  +   +RN+L++++T         L++
Sbjct: 195 YIHDQLQDAFKQLLLEQLKFVCEH-KVDVFFWKLLFYNVRNYLKRQQTDQAHTHTLLLIE 253

Query: 236 PSLKYYLFFFTTIFVAMI 183
            ++K+Y   +  +    +
Sbjct: 254 QAIKFYRMLYDKLMAKCV 271


>AE014297-3688|AAF56380.2|  948|Drosophila melanogaster CG6369-PA
           protein.
          Length = 948

 Score = 29.9 bits (64), Expect = 2.4
 Identities = 15/78 (19%), Positives = 37/78 (47%)
 Frame = -1

Query: 416 YIYCQLAIDLHLMTIEQIFFNIRFVSICCYFFS*IICRIRNHLRQRKTRSVIRDNATLLK 237
           YI+ QL      + +EQ+ F      +  +F+  +   +RN+L++++T         L++
Sbjct: 195 YIHDQLQDAFKQLLLEQLKFVCEH-KVDVFFWKLLFYNVRNYLKRQQTDQAHTHTLLLIE 253

Query: 236 PSLKYYLFFFTTIFVAMI 183
            ++K+Y   +  +    +
Sbjct: 254 QAIKFYRMLYDKLMAKCV 271


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,099,103
Number of Sequences: 53049
Number of extensions: 328819
Number of successful extensions: 548
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 545
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 548
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2089831299
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)