Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0700
         (548 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U50300-7|AAC48106.1|  645|Caenorhabditis elegans Hypothetical pr...    27   6.7  
AC006777-8|AAK72305.2|  367|Caenorhabditis elegans Seven tm rece...    27   6.7  

>U50300-7|AAC48106.1|  645|Caenorhabditis elegans Hypothetical
           protein R03H4.5 protein.
          Length = 645

 Score = 27.5 bits (58), Expect = 6.7
 Identities = 12/34 (35%), Positives = 21/34 (61%)
 Frame = -1

Query: 242 LKPSLKYYLFFFTTIFVAMIT*NYLFNGIYVSIK 141
           L  ++K YLF   +IF+A I  ++LF   Y+ ++
Sbjct: 308 LSATVKSYLFCILSIFIASIVLHHLFEKQYLKLE 341


>AC006777-8|AAK72305.2|  367|Caenorhabditis elegans Seven tm
           receptor protein 221 protein.
          Length = 367

 Score = 27.5 bits (58), Expect = 6.7
 Identities = 11/34 (32%), Positives = 20/34 (58%)
 Frame = -1

Query: 422 TYYIYCQLAIDLHLMTIEQIFFNIRFVSICCYFF 321
           T+ I   + + L++MT+   FF I F  + CY++
Sbjct: 198 TFNIKPSIGLALNIMTMNISFFAILFFGLKCYYY 231


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,415,032
Number of Sequences: 27780
Number of extensions: 190849
Number of successful extensions: 479
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 463
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 478
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1113119490
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)