Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0699
         (548 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic acetylch...    24   3.8  
AY705394-1|AAU12503.1|  557|Anopheles gambiae nicotinic acetylch...    24   3.8  
AY313948-1|AAP76391.1|  424|Anopheles gambiae cytochrome P450 CY...    24   3.8  

>AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 3 protein.
          Length = 710

 Score = 23.8 bits (49), Expect = 3.8
 Identities = 13/30 (43%), Positives = 16/30 (53%)
 Frame = +1

Query: 322 LPGDSGLYCSLRAVRPFSITSIFLLAADAV 411
           LP DSG   SL      S+T  FLL A+ +
Sbjct: 263 LPSDSGEKVSLSISILLSLTVFFLLLAEII 292


>AY705394-1|AAU12503.1|  557|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 1 protein.
          Length = 557

 Score = 23.8 bits (49), Expect = 3.8
 Identities = 15/36 (41%), Positives = 18/36 (50%)
 Frame = +1

Query: 304 SPLHLLLPGDSGLYCSLRAVRPFSITSIFLLAADAV 411
           S L   LP DSG   SL      S+T  FLL A+ +
Sbjct: 257 SVLVFYLPSDSGEKISLCISILLSLTVFFLLLAEII 292


>AY313948-1|AAP76391.1|  424|Anopheles gambiae cytochrome P450
           CYP6M4 protein.
          Length = 424

 Score = 23.8 bits (49), Expect = 3.8
 Identities = 10/34 (29%), Positives = 18/34 (52%)
 Frame = +3

Query: 132 MSEEMQQDAVDCATQALEKFNIEKDIAAFIKKEF 233
           + ++MQ  A  C T  LE+ N E    A ++ ++
Sbjct: 262 LDQDMQDKARKCVTDVLERHNGELTYEAAMEMDY 295


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 533,011
Number of Sequences: 2352
Number of extensions: 9806
Number of successful extensions: 22
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 50881347
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)