BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0699
(548 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U32944-1|AAB04149.1| 89|Homo sapiens cytoplasmic dynein light ... 113 3e-25
CR542128-1|CAG46925.1| 89|Homo sapiens DNCL1 protein. 113 3e-25
CR407672-1|CAG28600.1| 89|Homo sapiens DNCL1 protein. 113 3e-25
BC104245-1|AAI04246.1| 89|Homo sapiens dynein, light chain, LC... 113 3e-25
BC104244-1|AAI04245.1| 89|Homo sapiens dynein, light chain, LC... 113 3e-25
BC100289-1|AAI00290.1| 89|Homo sapiens dynein, light chain, LC... 113 3e-25
BC010744-1|AAH10744.1| 89|Homo sapiens dynein, light chain, LC... 112 9e-25
AF112997-1|AAP97230.1| 89|Homo sapiens protein inhibitor of ne... 112 9e-25
CR542177-1|CAG46974.1| 105|Homo sapiens DNAL4 protein. 38 0.023
CR456487-1|CAG30373.1| 105|Homo sapiens DNAL4 protein. 38 0.023
BT009847-1|AAP88849.1| 105|Homo sapiens dynein, axonemal, light... 38 0.023
BC002968-1|AAH02968.1| 105|Homo sapiens dynein, axonemal, light... 38 0.023
AY453399-1|AAS47516.1| 105|Homo sapiens proliferation-inducing ... 38 0.023
AL035366-1|CAA23018.1| 105|Homo sapiens hypothetical protein pr... 38 0.023
AL008583-1|CAA15429.1| 105|Homo sapiens dynein, axonemal, light... 38 0.023
AK223349-1|BAD97069.1| 105|Homo sapiens dynein light chain 4, a... 37 0.054
CR542195-1|CAG46992.1| 105|Homo sapiens DNAL4 protein. 36 0.094
>U32944-1|AAB04149.1| 89|Homo sapiens cytoplasmic dynein light
chain 1 protein.
Length = 89
Score = 113 bits (273), Expect = 3e-25
Identities = 64/94 (68%), Positives = 69/94 (73%), Gaps = 5/94 (5%)
Frame = +3
Query: 96 MCDRKAVIKNADMSEEMQQDAVDCATQALEKFNIEKDIAAFIKKEFDKKYNPTGIASWVV 275
MCDRKAVIKNADMSEEMQQD+V+CATQALEK+NIEKDIAA IKKEFDKKYNPT W
Sbjct: 1 MCDRKAVIKNADMSEEMQQDSVECATQALEKYNIEKDIAAHIKKEFDKKYNPT----WHC 56
Query: 276 ILARM*HTRLATSSTSTW-----GQWAILLFKSG 362
I+ R T T + GQ AILLFKSG
Sbjct: 57 IVGRN-FGSYVTHETKHFIYFYLGQVAILLFKSG 89
>CR542128-1|CAG46925.1| 89|Homo sapiens DNCL1 protein.
Length = 89
Score = 113 bits (273), Expect = 3e-25
Identities = 64/94 (68%), Positives = 69/94 (73%), Gaps = 5/94 (5%)
Frame = +3
Query: 96 MCDRKAVIKNADMSEEMQQDAVDCATQALEKFNIEKDIAAFIKKEFDKKYNPTGIASWVV 275
MCDRKAVIKNADMSEEMQQD+V+CATQALEK+NIEKDIAA IKKEFDKKYNPT W
Sbjct: 1 MCDRKAVIKNADMSEEMQQDSVECATQALEKYNIEKDIAAHIKKEFDKKYNPT----WHC 56
Query: 276 ILARM*HTRLATSSTSTW-----GQWAILLFKSG 362
I+ R T T + GQ AILLFKSG
Sbjct: 57 IVGRN-FGSYVTHETKHFIYFYLGQVAILLFKSG 89
>CR407672-1|CAG28600.1| 89|Homo sapiens DNCL1 protein.
Length = 89
Score = 113 bits (273), Expect = 3e-25
Identities = 64/94 (68%), Positives = 69/94 (73%), Gaps = 5/94 (5%)
Frame = +3
Query: 96 MCDRKAVIKNADMSEEMQQDAVDCATQALEKFNIEKDIAAFIKKEFDKKYNPTGIASWVV 275
MCDRKAVIKNADMSEEMQQD+V+CATQALEK+NIEKDIAA IKKEFDKKYNPT W
Sbjct: 1 MCDRKAVIKNADMSEEMQQDSVECATQALEKYNIEKDIAAHIKKEFDKKYNPT----WHC 56
Query: 276 ILARM*HTRLATSSTSTW-----GQWAILLFKSG 362
I+ R T T + GQ AILLFKSG
Sbjct: 57 IVGRN-FGSYVTHETKHFIYFYLGQVAILLFKSG 89
>BC104245-1|AAI04246.1| 89|Homo sapiens dynein, light chain,
LC8-type 1 protein.
Length = 89
Score = 113 bits (273), Expect = 3e-25
Identities = 64/94 (68%), Positives = 69/94 (73%), Gaps = 5/94 (5%)
Frame = +3
Query: 96 MCDRKAVIKNADMSEEMQQDAVDCATQALEKFNIEKDIAAFIKKEFDKKYNPTGIASWVV 275
MCDRKAVIKNADMSEEMQQD+V+CATQALEK+NIEKDIAA IKKEFDKKYNPT W
Sbjct: 1 MCDRKAVIKNADMSEEMQQDSVECATQALEKYNIEKDIAAHIKKEFDKKYNPT----WHC 56
Query: 276 ILARM*HTRLATSSTSTW-----GQWAILLFKSG 362
I+ R T T + GQ AILLFKSG
Sbjct: 57 IVGRN-FGSYVTHETKHFIYFYLGQVAILLFKSG 89
>BC104244-1|AAI04245.1| 89|Homo sapiens dynein, light chain,
LC8-type 1 protein.
Length = 89
Score = 113 bits (273), Expect = 3e-25
Identities = 64/94 (68%), Positives = 69/94 (73%), Gaps = 5/94 (5%)
Frame = +3
Query: 96 MCDRKAVIKNADMSEEMQQDAVDCATQALEKFNIEKDIAAFIKKEFDKKYNPTGIASWVV 275
MCDRKAVIKNADMSEEMQQD+V+CATQALEK+NIEKDIAA IKKEFDKKYNPT W
Sbjct: 1 MCDRKAVIKNADMSEEMQQDSVECATQALEKYNIEKDIAAHIKKEFDKKYNPT----WHC 56
Query: 276 ILARM*HTRLATSSTSTW-----GQWAILLFKSG 362
I+ R T T + GQ AILLFKSG
Sbjct: 57 IVGRN-FGSYVTHETKHFIYFYLGQVAILLFKSG 89
>BC100289-1|AAI00290.1| 89|Homo sapiens dynein, light chain,
LC8-type 1 protein.
Length = 89
Score = 113 bits (273), Expect = 3e-25
Identities = 64/94 (68%), Positives = 69/94 (73%), Gaps = 5/94 (5%)
Frame = +3
Query: 96 MCDRKAVIKNADMSEEMQQDAVDCATQALEKFNIEKDIAAFIKKEFDKKYNPTGIASWVV 275
MCDRKAVIKNADMSEEMQQD+V+CATQALEK+NIEKDIAA IKKEFDKKYNPT W
Sbjct: 1 MCDRKAVIKNADMSEEMQQDSVECATQALEKYNIEKDIAAHIKKEFDKKYNPT----WHC 56
Query: 276 ILARM*HTRLATSSTSTW-----GQWAILLFKSG 362
I+ R T T + GQ AILLFKSG
Sbjct: 57 IVGRN-FGSYVTHETKHFIYFYLGQVAILLFKSG 89
>BC010744-1|AAH10744.1| 89|Homo sapiens dynein, light chain,
LC8-type 2 protein.
Length = 89
Score = 112 bits (269), Expect = 9e-25
Identities = 63/94 (67%), Positives = 69/94 (73%), Gaps = 5/94 (5%)
Frame = +3
Query: 96 MCDRKAVIKNADMSEEMQQDAVDCATQALEKFNIEKDIAAFIKKEFDKKYNPTGIASWVV 275
M DRKAVIKNADMSE+MQQDAVDCATQA+EK+NIEKDIAA+IKKEFDKKYNPT W
Sbjct: 1 MSDRKAVIKNADMSEDMQQDAVDCATQAMEKYNIEKDIAAYIKKEFDKKYNPT----WHC 56
Query: 276 ILARM*HTRLATSSTSTW-----GQWAILLFKSG 362
I+ R T T + GQ AILLFKSG
Sbjct: 57 IVGRN-FGSYVTHETKHFIYFYLGQVAILLFKSG 89
>AF112997-1|AAP97230.1| 89|Homo sapiens protein inhibitor of
neuronal nitric oxide synthase protein.
Length = 89
Score = 112 bits (269), Expect = 9e-25
Identities = 63/94 (67%), Positives = 69/94 (73%), Gaps = 5/94 (5%)
Frame = +3
Query: 96 MCDRKAVIKNADMSEEMQQDAVDCATQALEKFNIEKDIAAFIKKEFDKKYNPTGIASWVV 275
M DRKAVIKNADMSE+MQQDAVDCATQA+EK+NIEKDIAA+IKKEFDKKYNPT W
Sbjct: 1 MSDRKAVIKNADMSEDMQQDAVDCATQAMEKYNIEKDIAAYIKKEFDKKYNPT----WHC 56
Query: 276 ILARM*HTRLATSSTSTW-----GQWAILLFKSG 362
I+ R T T + GQ AILLFKSG
Sbjct: 57 IVGRN-FGSYVTHETKHFIYFYLGQVAILLFKSG 89
>CR542177-1|CAG46974.1| 105|Homo sapiens DNAL4 protein.
Length = 105
Score = 37.9 bits (84), Expect = 0.023
Identities = 21/71 (29%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Frame = +3
Query: 72 KQKQTQDKMCDRKAVIKNADMSEEMQQDAVDCATQALEKF-NIEKDIAAFIKKEFDKKYN 248
K+ + K +++++DM EEM+ + ++ A EKF N + A IK+ DKK+
Sbjct: 7 KKDEADYKRLQTFPLVRHSDMPEEMRVETMELCVTACEKFSNNNESAAKMIKETMDKKFG 66
Query: 249 PTGIASWVVIL 281
+SW V++
Sbjct: 67 ----SSWHVVI 73
Score = 33.9 bits (74), Expect = 0.38
Identities = 12/37 (32%), Positives = 22/37 (59%)
Frame = +2
Query: 221 QERI*QEIQSYRHCIVGRNFGSYVTHETRHFIYFYLG 331
+E + ++ S H ++G FG +THE ++ +Y Y G
Sbjct: 58 KETMDKKFGSSWHVVIGEGFGFEITHEVKNLLYLYFG 94
>CR456487-1|CAG30373.1| 105|Homo sapiens DNAL4 protein.
Length = 105
Score = 37.9 bits (84), Expect = 0.023
Identities = 21/71 (29%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Frame = +3
Query: 72 KQKQTQDKMCDRKAVIKNADMSEEMQQDAVDCATQALEKF-NIEKDIAAFIKKEFDKKYN 248
K+ + K +++++DM EEM+ + ++ A EKF N + A IK+ DKK+
Sbjct: 7 KKDEADYKRLQTFPLVRHSDMPEEMRVETMELCVTACEKFSNNNESAAKMIKETMDKKFG 66
Query: 249 PTGIASWVVIL 281
+SW V++
Sbjct: 67 ----SSWHVVI 73
Score = 33.9 bits (74), Expect = 0.38
Identities = 12/37 (32%), Positives = 22/37 (59%)
Frame = +2
Query: 221 QERI*QEIQSYRHCIVGRNFGSYVTHETRHFIYFYLG 331
+E + ++ S H ++G FG +THE ++ +Y Y G
Sbjct: 58 KETMDKKFGSSWHVVIGEGFGFEITHEVKNLLYLYFG 94
>BT009847-1|AAP88849.1| 105|Homo sapiens dynein, axonemal, light
polypeptide 4 protein.
Length = 105
Score = 37.9 bits (84), Expect = 0.023
Identities = 21/71 (29%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Frame = +3
Query: 72 KQKQTQDKMCDRKAVIKNADMSEEMQQDAVDCATQALEKF-NIEKDIAAFIKKEFDKKYN 248
K+ + K +++++DM EEM+ + ++ A EKF N + A IK+ DKK+
Sbjct: 7 KKDEADYKRLQTFPLVRHSDMPEEMRVETMELCVTACEKFSNNNESAAKMIKETMDKKFG 66
Query: 249 PTGIASWVVIL 281
+SW V++
Sbjct: 67 ----SSWHVVI 73
Score = 33.9 bits (74), Expect = 0.38
Identities = 12/37 (32%), Positives = 22/37 (59%)
Frame = +2
Query: 221 QERI*QEIQSYRHCIVGRNFGSYVTHETRHFIYFYLG 331
+E + ++ S H ++G FG +THE ++ +Y Y G
Sbjct: 58 KETMDKKFGSSWHVVIGEGFGFEITHEVKNLLYLYFG 94
>BC002968-1|AAH02968.1| 105|Homo sapiens dynein, axonemal, light
chain 4 protein.
Length = 105
Score = 37.9 bits (84), Expect = 0.023
Identities = 21/71 (29%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Frame = +3
Query: 72 KQKQTQDKMCDRKAVIKNADMSEEMQQDAVDCATQALEKF-NIEKDIAAFIKKEFDKKYN 248
K+ + K +++++DM EEM+ + ++ A EKF N + A IK+ DKK+
Sbjct: 7 KKDEADYKRLQTFPLVRHSDMPEEMRVETMELCVTACEKFSNNNESAAKMIKETMDKKFG 66
Query: 249 PTGIASWVVIL 281
+SW V++
Sbjct: 67 ----SSWHVVI 73
Score = 33.9 bits (74), Expect = 0.38
Identities = 12/37 (32%), Positives = 22/37 (59%)
Frame = +2
Query: 221 QERI*QEIQSYRHCIVGRNFGSYVTHETRHFIYFYLG 331
+E + ++ S H ++G FG +THE ++ +Y Y G
Sbjct: 58 KETMDKKFGSSWHVVIGEGFGFEITHEVKNLLYLYFG 94
>AY453399-1|AAS47516.1| 105|Homo sapiens proliferation-inducing
protein 27 protein.
Length = 105
Score = 37.9 bits (84), Expect = 0.023
Identities = 21/71 (29%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Frame = +3
Query: 72 KQKQTQDKMCDRKAVIKNADMSEEMQQDAVDCATQALEKF-NIEKDIAAFIKKEFDKKYN 248
K+ + K +++++DM EEM+ + ++ A EKF N + A IK+ DKK+
Sbjct: 7 KKDEADYKRLQTFPLVRHSDMPEEMRVETMELCVTACEKFSNNNESAAKMIKETMDKKFG 66
Query: 249 PTGIASWVVIL 281
+SW V++
Sbjct: 67 ----SSWHVVI 73
Score = 33.9 bits (74), Expect = 0.38
Identities = 12/37 (32%), Positives = 22/37 (59%)
Frame = +2
Query: 221 QERI*QEIQSYRHCIVGRNFGSYVTHETRHFIYFYLG 331
+E + ++ S H ++G FG +THE ++ +Y Y G
Sbjct: 58 KETMDKKFGSSWHVVIGEGFGFEITHEVKNLLYLYFG 94
>AL035366-1|CAA23018.1| 105|Homo sapiens hypothetical protein
protein.
Length = 105
Score = 37.9 bits (84), Expect = 0.023
Identities = 21/71 (29%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Frame = +3
Query: 72 KQKQTQDKMCDRKAVIKNADMSEEMQQDAVDCATQALEKF-NIEKDIAAFIKKEFDKKYN 248
K+ + K +++++DM EEM+ + ++ A EKF N + A IK+ DKK+
Sbjct: 7 KKDEADYKRLQTFPLVRHSDMPEEMRVETMELCVTACEKFSNNNESAAKMIKETMDKKFG 66
Query: 249 PTGIASWVVIL 281
+SW V++
Sbjct: 67 ----SSWHVVI 73
Score = 33.9 bits (74), Expect = 0.38
Identities = 12/37 (32%), Positives = 22/37 (59%)
Frame = +2
Query: 221 QERI*QEIQSYRHCIVGRNFGSYVTHETRHFIYFYLG 331
+E + ++ S H ++G FG +THE ++ +Y Y G
Sbjct: 58 KETMDKKFGSSWHVVIGEGFGFEITHEVKNLLYLYFG 94
>AL008583-1|CAA15429.1| 105|Homo sapiens dynein, axonemal, light
chain 4 protein.
Length = 105
Score = 37.9 bits (84), Expect = 0.023
Identities = 21/71 (29%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Frame = +3
Query: 72 KQKQTQDKMCDRKAVIKNADMSEEMQQDAVDCATQALEKF-NIEKDIAAFIKKEFDKKYN 248
K+ + K +++++DM EEM+ + ++ A EKF N + A IK+ DKK+
Sbjct: 7 KKDEADYKRLQTFPLVRHSDMPEEMRVETMELCVTACEKFSNNNESAAKMIKETMDKKFG 66
Query: 249 PTGIASWVVIL 281
+SW V++
Sbjct: 67 ----SSWHVVI 73
Score = 33.9 bits (74), Expect = 0.38
Identities = 12/37 (32%), Positives = 22/37 (59%)
Frame = +2
Query: 221 QERI*QEIQSYRHCIVGRNFGSYVTHETRHFIYFYLG 331
+E + ++ S H ++G FG +THE ++ +Y Y G
Sbjct: 58 KETMDKKFGSSWHVVIGEGFGFEITHEVKNLLYLYFG 94
>AK223349-1|BAD97069.1| 105|Homo sapiens dynein light chain 4,
axonemal variant protein.
Length = 105
Score = 36.7 bits (81), Expect = 0.054
Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Frame = +3
Query: 72 KQKQTQDKMCDRKAVIKNADMSEEMQQDAVDCATQALEKF-NIEKDIAAFIKKEFDKKYN 248
K+ + K +++++DM EEM+ ++ A EKF N + A IK+ DKK+
Sbjct: 7 KKDEADYKRLQTFPLVRHSDMPEEMRVGTMELCVTACEKFSNNNESAAKMIKETMDKKFG 66
Query: 249 PTGIASWVVIL 281
+SW V++
Sbjct: 67 ----SSWHVVI 73
Score = 33.9 bits (74), Expect = 0.38
Identities = 12/37 (32%), Positives = 22/37 (59%)
Frame = +2
Query: 221 QERI*QEIQSYRHCIVGRNFGSYVTHETRHFIYFYLG 331
+E + ++ S H ++G FG +THE ++ +Y Y G
Sbjct: 58 KETMDKKFGSSWHVVIGEGFGFEITHEVKNLLYLYFG 94
>CR542195-1|CAG46992.1| 105|Homo sapiens DNAL4 protein.
Length = 105
Score = 35.9 bits (79), Expect = 0.094
Identities = 20/71 (28%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Frame = +3
Query: 72 KQKQTQDKMCDRKAVIKNADMSEEMQQDAVDCATQALEKF-NIEKDIAAFIKKEFDKKYN 248
K+ + K +++++DM EEM+ + ++ A EKF N + A I + DKK+
Sbjct: 7 KKDEADYKRLQTFPLVRHSDMPEEMRVETMELCVTACEKFSNNNESAAKMINETMDKKFG 66
Query: 249 PTGIASWVVIL 281
+SW V++
Sbjct: 67 ----SSWHVVI 73
Score = 33.5 bits (73), Expect = 0.50
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = +2
Query: 257 HCIVGRNFGSYVTHETRHFIYFYLG 331
H ++G FG +THE ++ +Y Y G
Sbjct: 70 HVVIGEGFGFEITHEVKNLLYLYFG 94
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 75,385,879
Number of Sequences: 237096
Number of extensions: 1528308
Number of successful extensions: 2677
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 2571
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2661
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5421005376
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -