Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0695
         (369 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_06_1752 + 39659914-39659942,39660195-39660306,39660348-396605...    26   8.1  

>01_06_1752 +
           39659914-39659942,39660195-39660306,39660348-39660533,
           39660918-39661022,39661147-39661230,39661416-39661531,
           39661636-39661737,39661816-39661929,39662323-39662389,
           39662457-39662510,39662899-39662973,39663057-39663092,
           39663490-39663591
          Length = 393

 Score = 26.2 bits (55), Expect = 8.1
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = -2

Query: 257 TSWQGIRTRCRK 222
           T W+G+R RCRK
Sbjct: 356 TPWEGVRARCRK 367


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,770,698
Number of Sequences: 37544
Number of extensions: 85966
Number of successful extensions: 164
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 163
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 164
length of database: 14,793,348
effective HSP length: 74
effective length of database: 12,015,092
effective search space used: 576724416
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)