Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0692
         (598 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q0IGZ7 Cluster: IP01844p; n=1; Drosophila melanogaster|...    34   2.9  
UniRef50_Q7KBL8 Cluster: Mediator of RNA polymerase II transcrip...    34   2.9  
UniRef50_UPI00003BFFA3 Cluster: PREDICTED: similar to intersex C...    32   8.9  

>UniRef50_Q0IGZ7 Cluster: IP01844p; n=1; Drosophila
           melanogaster|Rep: IP01844p - Drosophila melanogaster
           (Fruit fly)
          Length = 203

 Score = 33.9 bits (74), Expect = 2.9
 Identities = 14/20 (70%), Positives = 19/20 (95%)
 Frame = +1

Query: 340 DKMDNISKVKSLMGSLRESI 399
           +K+DNIS+VKSL+G LRES+
Sbjct: 74  EKLDNISRVKSLLGPLRESM 93


>UniRef50_Q7KBL8 Cluster: Mediator of RNA polymerase II
           transcription subunit 29; n=7; Endopterygota|Rep:
           Mediator of RNA polymerase II transcription subunit 29 -
           Drosophila melanogaster (Fruit fly)
          Length = 188

 Score = 33.9 bits (74), Expect = 2.9
 Identities = 14/20 (70%), Positives = 19/20 (95%)
 Frame = +1

Query: 340 DKMDNISKVKSLMGSLRESI 399
           +K+DNIS+VKSL+G LRES+
Sbjct: 48  EKLDNISRVKSLLGPLRESM 67


>UniRef50_UPI00003BFFA3 Cluster: PREDICTED: similar to intersex
           CG13201-PA; n=2; Apocrita|Rep: PREDICTED: similar to
           intersex CG13201-PA - Apis mellifera
          Length = 190

 Score = 32.3 bits (70), Expect = 8.9
 Identities = 14/20 (70%), Positives = 19/20 (95%)
 Frame = +1

Query: 340 DKMDNISKVKSLMGSLRESI 399
           +K+DNISKVKSL+ SLR+S+
Sbjct: 51  EKLDNISKVKSLIVSLRDSL 70


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 547,191,754
Number of Sequences: 1657284
Number of extensions: 9808583
Number of successful extensions: 20160
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 19654
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20159
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 41902926763
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)