Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0692
         (598 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC006614-1|AAF39762.2|  472|Caenorhabditis elegans Hypothetical ...    29   3.3  
Z96047-4|CAB09414.1|  796|Caenorhabditis elegans Hypothetical pr...    28   4.4  
Z50044-8|CAA90360.1|  591|Caenorhabditis elegans Hypothetical pr...    27   7.7  
AC006674-9|AAF39935.1|  178|Caenorhabditis elegans Hypothetical ...    27   7.7  

>AC006614-1|AAF39762.2|  472|Caenorhabditis elegans Hypothetical
           protein C34H3.1 protein.
          Length = 472

 Score = 28.7 bits (61), Expect = 3.3
 Identities = 11/34 (32%), Positives = 19/34 (55%)
 Frame = -1

Query: 352 CPFYLVVFVEALVQVAFVEEIAVALWVLVQAFAG 251
           C F++  F   LV  +FV  + +A W +V+ + G
Sbjct: 275 CRFFMHPFFLVLVLASFVAFLVIATWFIVRRYTG 308


>Z96047-4|CAB09414.1|  796|Caenorhabditis elegans Hypothetical
           protein DY3.5 protein.
          Length = 796

 Score = 28.3 bits (60), Expect = 4.4
 Identities = 15/55 (27%), Positives = 28/55 (50%)
 Frame = +3

Query: 399 TVTIQTLLTGC*IETLVIFLAESSCSP*VIQMTLKSAPQYYTQITCRLQYTKRLD 563
           T+ I+  +  C  +TL+  L+ S C    +  ++  + Q Y  I  RL+Y+  +D
Sbjct: 88  TLEIKKKIFNCFFQTLLSLLSFSKCQARNLSFSITFSNQIYGYIYNRLKYSLSID 142


>Z50044-8|CAA90360.1|  591|Caenorhabditis elegans Hypothetical
           protein F22B5.9 protein.
          Length = 591

 Score = 27.5 bits (58), Expect = 7.7
 Identities = 10/20 (50%), Positives = 15/20 (75%)
 Frame = -3

Query: 230 LGSLVRAYSFDCDSYLKFLD 171
           +G+++R  SFD DSY  F+D
Sbjct: 123 VGAVLRDISFDADSYASFID 142


>AC006674-9|AAF39935.1|  178|Caenorhabditis elegans Hypothetical
           protein K12H6.5 protein.
          Length = 178

 Score = 27.5 bits (58), Expect = 7.7
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = +2

Query: 485 NTDDT*VCAPILHPNHMQTPIH 550
           N++D+  C PI HP H   P H
Sbjct: 38  NSNDSHCCLPINHPTHRHHPHH 59


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,815,648
Number of Sequences: 27780
Number of extensions: 240872
Number of successful extensions: 480
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 474
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 480
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1268802960
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)