Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0691
         (598 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript...    26   0.80 
AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript...    25   1.4  
AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcript...    25   2.5  
L10440-1|AAA29360.1|  154|Anopheles gambiae transposase protein.       23   7.5  

>AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1222

 Score = 26.2 bits (55), Expect = 0.80
 Identities = 16/39 (41%), Positives = 21/39 (53%)
 Frame = -2

Query: 336 LIQRSSITARGIRRISWASDPVLCQTACLSTATNAAVEA 220
           ++QR  + ARG  R+ +A D     TA  S  TNA  EA
Sbjct: 102 VMQRIDVLARGHPRVVFAGDLNAWHTAWGSCRTNAKGEA 140


>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1201

 Score = 25.4 bits (53), Expect = 1.4
 Identities = 15/35 (42%), Positives = 16/35 (45%)
 Frame = +3

Query: 159 PSXCSLPQKRD*KERVYSIPSLQRRRWSLCSSKQF 263
           PS   L   R     VYS+    RRRWSLC    F
Sbjct: 9   PSGARLSISRGSPTGVYSV----RRRWSLCQKLHF 39


>AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1209

 Score = 24.6 bits (51), Expect = 2.5
 Identities = 11/21 (52%), Positives = 13/21 (61%)
 Frame = +3

Query: 474 RSMSQRTRRCCRKGAPTDDAP 536
           RSM +RT R   +GAPT   P
Sbjct: 4   RSMRKRTTRLPEEGAPTGAGP 24


>L10440-1|AAA29360.1|  154|Anopheles gambiae transposase protein.
          Length = 154

 Score = 23.0 bits (47), Expect = 7.5
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = +3

Query: 369 ASYRPHSGKSRALPTQTYIPCSRS 440
           A+ RPH  K + L  Q   PC +S
Sbjct: 112 AAKRPHMKKKKVLFHQDNAPCHKS 135


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 614,037
Number of Sequences: 2352
Number of extensions: 12264
Number of successful extensions: 32
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 57609459
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)