Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0691
         (598 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY060845-1|AAL28393.1|  186|Drosophila melanogaster GM02242p pro...   226   2e-59
AE014298-945|AAN09183.1|  186|Drosophila melanogaster CG3203-PD,...   226   2e-59
AE014298-944|AAF46194.1|  186|Drosophila melanogaster CG3203-PC,...   226   2e-59
AE014298-943|AAN09182.1|  186|Drosophila melanogaster CG3203-PB,...   226   2e-59
AE014298-942|AAF46195.1|  186|Drosophila melanogaster CG3203-PA,...   226   2e-59
AY069455-1|AAL39600.1|  392|Drosophila melanogaster LD17773p pro...    28   8.4  
AE014296-2383|AAF49740.2|  392|Drosophila melanogaster CG3919-PA...    28   8.4  

>AY060845-1|AAL28393.1|  186|Drosophila melanogaster GM02242p
           protein.
          Length = 186

 Score =  226 bits (552), Expect = 2e-59
 Identities = 111/185 (60%), Positives = 132/185 (71%)
 Frame = +1

Query: 37  MGRYSREPDNPAKSCKARGSNLRVHFKNTYETAMAIRKMPLRRXVRYLKNVIEKKECIPF 216
           MGRYSRE DN AKSCKARG NLRVHFKNT+ETA AI++MPLRR  RYLK VI++KEC+PF
Sbjct: 1   MGRYSRESDNVAKSCKARGPNLRVHFKNTHETAQAIKRMPLRRAQRYLKAVIDQKECVPF 60

Query: 217 RRFNGGVGRCAQASSLAQHRVAGPRNPPNSSCSY*GTLNQNADNKTLDVDRLVIDHIQVN 396
           RRFNGGVGRCAQA      +   P+               NAD K LD DRLV+ HIQVN
Sbjct: 61  RRFNGGVGRCAQAKQWKTTQGRWPKKSAEFLLQLLRNAEANADCKGLDADRLVVHHIQVN 120

Query: 397 RAPCLRRRTYRAHGRINPYMSSXCHIEVCLSEREDAVVREPLLMMPQRRKSFQEKACASX 576
           RA CLRRRTYRAHGRINPYMSS CH+EV L+E+E+ +V +     P ++K  ++K     
Sbjct: 121 RAQCLRRRTYRAHGRINPYMSSPCHVEVILTEKEE-LVSKATDDEPAKKKLSKKKLQRQK 179

Query: 577 EKMMK 591
           EKM++
Sbjct: 180 EKMLR 184


>AE014298-945|AAN09183.1|  186|Drosophila melanogaster CG3203-PD,
           isoform D protein.
          Length = 186

 Score =  226 bits (552), Expect = 2e-59
 Identities = 111/185 (60%), Positives = 132/185 (71%)
 Frame = +1

Query: 37  MGRYSREPDNPAKSCKARGSNLRVHFKNTYETAMAIRKMPLRRXVRYLKNVIEKKECIPF 216
           MGRYSRE DN AKSCKARG NLRVHFKNT+ETA AI++MPLRR  RYLK VI++KEC+PF
Sbjct: 1   MGRYSRESDNVAKSCKARGPNLRVHFKNTHETAQAIKRMPLRRAQRYLKAVIDQKECVPF 60

Query: 217 RRFNGGVGRCAQASSLAQHRVAGPRNPPNSSCSY*GTLNQNADNKTLDVDRLVIDHIQVN 396
           RRFNGGVGRCAQA      +   P+               NAD K LD DRLV+ HIQVN
Sbjct: 61  RRFNGGVGRCAQAKQWKTTQGRWPKKSAEFLLQLLRNAEANADCKGLDADRLVVHHIQVN 120

Query: 397 RAPCLRRRTYRAHGRINPYMSSXCHIEVCLSEREDAVVREPLLMMPQRRKSFQEKACASX 576
           RA CLRRRTYRAHGRINPYMSS CH+EV L+E+E+ +V +     P ++K  ++K     
Sbjct: 121 RAQCLRRRTYRAHGRINPYMSSPCHVEVILTEKEE-LVSKATDDEPAKKKLSKKKLQRQK 179

Query: 577 EKMMK 591
           EKM++
Sbjct: 180 EKMLR 184


>AE014298-944|AAF46194.1|  186|Drosophila melanogaster CG3203-PC,
           isoform C protein.
          Length = 186

 Score =  226 bits (552), Expect = 2e-59
 Identities = 111/185 (60%), Positives = 132/185 (71%)
 Frame = +1

Query: 37  MGRYSREPDNPAKSCKARGSNLRVHFKNTYETAMAIRKMPLRRXVRYLKNVIEKKECIPF 216
           MGRYSRE DN AKSCKARG NLRVHFKNT+ETA AI++MPLRR  RYLK VI++KEC+PF
Sbjct: 1   MGRYSRESDNVAKSCKARGPNLRVHFKNTHETAQAIKRMPLRRAQRYLKAVIDQKECVPF 60

Query: 217 RRFNGGVGRCAQASSLAQHRVAGPRNPPNSSCSY*GTLNQNADNKTLDVDRLVIDHIQVN 396
           RRFNGGVGRCAQA      +   P+               NAD K LD DRLV+ HIQVN
Sbjct: 61  RRFNGGVGRCAQAKQWKTTQGRWPKKSAEFLLQLLRNAEANADCKGLDADRLVVHHIQVN 120

Query: 397 RAPCLRRRTYRAHGRINPYMSSXCHIEVCLSEREDAVVREPLLMMPQRRKSFQEKACASX 576
           RA CLRRRTYRAHGRINPYMSS CH+EV L+E+E+ +V +     P ++K  ++K     
Sbjct: 121 RAQCLRRRTYRAHGRINPYMSSPCHVEVILTEKEE-LVSKATDDEPAKKKLSKKKLQRQK 179

Query: 577 EKMMK 591
           EKM++
Sbjct: 180 EKMLR 184


>AE014298-943|AAN09182.1|  186|Drosophila melanogaster CG3203-PB,
           isoform B protein.
          Length = 186

 Score =  226 bits (552), Expect = 2e-59
 Identities = 111/185 (60%), Positives = 132/185 (71%)
 Frame = +1

Query: 37  MGRYSREPDNPAKSCKARGSNLRVHFKNTYETAMAIRKMPLRRXVRYLKNVIEKKECIPF 216
           MGRYSRE DN AKSCKARG NLRVHFKNT+ETA AI++MPLRR  RYLK VI++KEC+PF
Sbjct: 1   MGRYSRESDNVAKSCKARGPNLRVHFKNTHETAQAIKRMPLRRAQRYLKAVIDQKECVPF 60

Query: 217 RRFNGGVGRCAQASSLAQHRVAGPRNPPNSSCSY*GTLNQNADNKTLDVDRLVIDHIQVN 396
           RRFNGGVGRCAQA      +   P+               NAD K LD DRLV+ HIQVN
Sbjct: 61  RRFNGGVGRCAQAKQWKTTQGRWPKKSAEFLLQLLRNAEANADCKGLDADRLVVHHIQVN 120

Query: 397 RAPCLRRRTYRAHGRINPYMSSXCHIEVCLSEREDAVVREPLLMMPQRRKSFQEKACASX 576
           RA CLRRRTYRAHGRINPYMSS CH+EV L+E+E+ +V +     P ++K  ++K     
Sbjct: 121 RAQCLRRRTYRAHGRINPYMSSPCHVEVILTEKEE-LVSKATDDEPAKKKLSKKKLQRQK 179

Query: 577 EKMMK 591
           EKM++
Sbjct: 180 EKMLR 184


>AE014298-942|AAF46195.1|  186|Drosophila melanogaster CG3203-PA,
           isoform A protein.
          Length = 186

 Score =  226 bits (552), Expect = 2e-59
 Identities = 111/185 (60%), Positives = 132/185 (71%)
 Frame = +1

Query: 37  MGRYSREPDNPAKSCKARGSNLRVHFKNTYETAMAIRKMPLRRXVRYLKNVIEKKECIPF 216
           MGRYSRE DN AKSCKARG NLRVHFKNT+ETA AI++MPLRR  RYLK VI++KEC+PF
Sbjct: 1   MGRYSRESDNVAKSCKARGPNLRVHFKNTHETAQAIKRMPLRRAQRYLKAVIDQKECVPF 60

Query: 217 RRFNGGVGRCAQASSLAQHRVAGPRNPPNSSCSY*GTLNQNADNKTLDVDRLVIDHIQVN 396
           RRFNGGVGRCAQA      +   P+               NAD K LD DRLV+ HIQVN
Sbjct: 61  RRFNGGVGRCAQAKQWKTTQGRWPKKSAEFLLQLLRNAEANADCKGLDADRLVVHHIQVN 120

Query: 397 RAPCLRRRTYRAHGRINPYMSSXCHIEVCLSEREDAVVREPLLMMPQRRKSFQEKACASX 576
           RA CLRRRTYRAHGRINPYMSS CH+EV L+E+E+ +V +     P ++K  ++K     
Sbjct: 121 RAQCLRRRTYRAHGRINPYMSSPCHVEVILTEKEE-LVSKATDDEPAKKKLSKKKLQRQK 179

Query: 577 EKMMK 591
           EKM++
Sbjct: 180 EKMLR 184


>AY069455-1|AAL39600.1|  392|Drosophila melanogaster LD17773p
           protein.
          Length = 392

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 20/83 (24%), Positives = 32/83 (38%)
 Frame = +1

Query: 49  SREPDNPAKSCKARGSNLRVHFKNTYETAMAIRKMPLRRXVRYLKNVIEKKECIPFRRFN 228
           S E  N  KSCK R  N+R  +  + +         L   +++L+  I     +P R   
Sbjct: 143 SNEMRNSVKSCKERWRNIRSSYARSIKLHHGANTYYLNSELKFLQKHITPGVPVPLR--- 199

Query: 229 GGVGRCAQASSLAQHRVAGPRNP 297
              GR ++     +H    P  P
Sbjct: 200 ---GRRSRPKGQEEHDEGDPETP 219


>AE014296-2383|AAF49740.2|  392|Drosophila melanogaster CG3919-PA
           protein.
          Length = 392

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 20/83 (24%), Positives = 32/83 (38%)
 Frame = +1

Query: 49  SREPDNPAKSCKARGSNLRVHFKNTYETAMAIRKMPLRRXVRYLKNVIEKKECIPFRRFN 228
           S E  N  KSCK R  N+R  +  + +         L   +++L+  I     +P R   
Sbjct: 143 SNEMRNSVKSCKERWRNIRSSYARSIKLHHGANTYYLNSELKFLQKHITPGVPVPLR--- 199

Query: 229 GGVGRCAQASSLAQHRVAGPRNP 297
              GR ++     +H    P  P
Sbjct: 200 ---GRRSRPKGQEEHDEGDPETP 219


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,611,676
Number of Sequences: 53049
Number of extensions: 554561
Number of successful extensions: 1596
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1556
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1586
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2420893683
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)