Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0691
(598 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g67430.1 68414.m07675 60S ribosomal protein L17 (RPL17B) simi... 182 2e-46
At1g27400.1 68414.m03340 60S ribosomal protein L17 (RPL17A) simi... 181 3e-46
At2g44480.1 68415.m05530 glycosyl hydrolase family 1 protein con... 29 3.1
At3g13560.3 68416.m01706 glycosyl hydrolase family 17 protein si... 28 4.1
At3g13560.2 68416.m01705 glycosyl hydrolase family 17 protein si... 28 4.1
At3g13560.1 68416.m01704 glycosyl hydrolase family 17 protein si... 28 4.1
At5g14760.1 68418.m01732 L-aspartate oxidase family protein simi... 28 5.4
At1g60540.1 68414.m06815 dynamin family protein similar to SP|Q9... 28 5.4
At5g66270.1 68418.m08356 zinc finger (CCCH-type) family protein ... 27 7.2
At4g35270.1 68417.m05012 RWP-RK domain-containing protein simila... 27 7.2
At3g03640.1 68416.m00367 glycosyl hydrolase family 1 protein con... 27 7.2
At5g33320.1 68418.m03955 triose phosphate/phosphate translocator... 27 9.5
At2g44490.1 68415.m05531 glycosyl hydrolase family 1 protein con... 27 9.5
At1g60500.1 68414.m06811 dynamin family protein similar to RBTMx... 27 9.5
>At1g67430.1 68414.m07675 60S ribosomal protein L17 (RPL17B) similar
to ribosomal protein GI:19101 from [Hordeum vulgare]
Length = 175
Score = 182 bits (443), Expect = 2e-46
Identities = 98/173 (56%), Positives = 118/173 (68%), Gaps = 3/173 (1%)
Frame = +1
Query: 37 MGRYSREPDNPAKSCKARGSNLRVHFKNTYETAMAIRKMPLRRXVRYLKNVIEKKECIPF 216
M +YS+EPDN KSCKARGS+LRVHFKNT ETA AIRK+PL + RYL++VI K+ IPF
Sbjct: 1 MVKYSQEPDNQTKSCKARGSDLRVHFKNTRETAHAIRKLPLIKAKRYLEDVIAHKQAIPF 60
Query: 217 RRFNGGVGRCAQASSLAQHRVAGPRNPPNSSCSY*GTL---NQNADNKTLDVDRLVIDHI 387
RF GVGR AQA + +H R P S+ L NA+ K LDVD L I HI
Sbjct: 61 TRFCRGVGRTAQAKN--RHSNGQGRWPAKSAQFVLDLLKNAESNAEVKGLDVDALFISHI 118
Query: 388 QVNRAPCLRRRTYRAHGRINPYMSSXCHIEVCLSEREDAVVREPLLMMPQRRK 546
QVN+A RRRTYRAHGRINPYMS+ CHIE+ LSE+E+ V +EP + + K
Sbjct: 119 QVNQAAKQRRRTYRAHGRINPYMSNPCHIELILSEKEEPVKKEPETQLAAKSK 171
>At1g27400.1 68414.m03340 60S ribosomal protein L17 (RPL17A) similar
to GB:P51413 from [Arabidopsis thaliana]; similar to
ESTs gb|L33542 and gb|AA660016
Length = 176
Score = 181 bits (441), Expect = 3e-46
Identities = 97/173 (56%), Positives = 118/173 (68%), Gaps = 3/173 (1%)
Frame = +1
Query: 37 MGRYSREPDNPAKSCKARGSNLRVHFKNTYETAMAIRKMPLRRXVRYLKNVIEKKECIPF 216
M +YS+EPDN KSCKARG++LRVHFKNT ETA AIRK+PL + RYL++VI K+ IPF
Sbjct: 1 MVKYSQEPDNITKSCKARGADLRVHFKNTRETAHAIRKLPLNKAKRYLEDVIAHKQAIPF 60
Query: 217 RRFNGGVGRCAQASSLAQHRVAGPRNPPNSSCSY*GTL---NQNADNKTLDVDRLVIDHI 387
RF GVGR AQA + +H R P S+ L NA+ K LDVD L I HI
Sbjct: 61 TRFCRGVGRTAQAKN--RHSNGQGRWPAKSAQFVLDLLKNAESNAEVKGLDVDALFISHI 118
Query: 388 QVNRAPCLRRRTYRAHGRINPYMSSXCHIEVCLSEREDAVVREPLLMMPQRRK 546
QVN+A RRRTYRAHGRINPYMS+ CHIE+ LSE+E+ V +EP + + K
Sbjct: 119 QVNQAAKQRRRTYRAHGRINPYMSNPCHIELILSEKEEPVKKEPETQLAAKSK 171
>At2g44480.1 68415.m05530 glycosyl hydrolase family 1 protein
contains Pfam PF00232 : Glycosyl hydrolase family 1
domain; TIGRFAM TIGR01233: 6-phospho-beta-galactosidase;
similar to amygdalin hydrolase isoform AH I precursor
(GI:16757966) [Prunus serotina]
Length = 517
Score = 28.7 bits (61), Expect = 3.1
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = -3
Query: 350 LLSAF*FSVPQ*LQEEFGGFLGP 282
L++ F + PQ L++E+GGFL P
Sbjct: 153 LVTLFHWDTPQALEDEYGGFLNP 175
>At3g13560.3 68416.m01706 glycosyl hydrolase family 17 protein
similar to beta-1,3-glucanase GI:15150341 from [Camellia
sinensis]
Length = 505
Score = 28.3 bits (60), Expect = 4.1
Identities = 16/66 (24%), Positives = 25/66 (37%)
Frame = +1
Query: 175 YLKNVIEKKECIPFRRFNGGVGRCAQASSLAQHRVAGPRNPPNSSCSY*GTLNQNADNKT 354
YL N ++ F + + + R+P +C+Y G+LN NA N
Sbjct: 399 YLPNDVKSHASFAFNDYYQKMKSAGGTCDFDGTAITTTRDPSYRTCAYTGSLNANATNGN 458
Query: 355 LDVDRL 372
D L
Sbjct: 459 FPPDAL 464
>At3g13560.2 68416.m01705 glycosyl hydrolase family 17 protein
similar to beta-1,3-glucanase GI:15150341 from [Camellia
sinensis]
Length = 505
Score = 28.3 bits (60), Expect = 4.1
Identities = 16/66 (24%), Positives = 25/66 (37%)
Frame = +1
Query: 175 YLKNVIEKKECIPFRRFNGGVGRCAQASSLAQHRVAGPRNPPNSSCSY*GTLNQNADNKT 354
YL N ++ F + + + R+P +C+Y G+LN NA N
Sbjct: 399 YLPNDVKSHASFAFNDYYQKMKSAGGTCDFDGTAITTTRDPSYRTCAYTGSLNANATNGN 458
Query: 355 LDVDRL 372
D L
Sbjct: 459 FPPDAL 464
>At3g13560.1 68416.m01704 glycosyl hydrolase family 17 protein
similar to beta-1,3-glucanase GI:15150341 from [Camellia
sinensis]
Length = 505
Score = 28.3 bits (60), Expect = 4.1
Identities = 16/66 (24%), Positives = 25/66 (37%)
Frame = +1
Query: 175 YLKNVIEKKECIPFRRFNGGVGRCAQASSLAQHRVAGPRNPPNSSCSY*GTLNQNADNKT 354
YL N ++ F + + + R+P +C+Y G+LN NA N
Sbjct: 399 YLPNDVKSHASFAFNDYYQKMKSAGGTCDFDGTAITTTRDPSYRTCAYTGSLNANATNGN 458
Query: 355 LDVDRL 372
D L
Sbjct: 459 FPPDAL 464
>At5g14760.1 68418.m01732 L-aspartate oxidase family protein similar
to L-aspartate oxidase, Escherichia coli [SP|P10902];
contains Pfam profiles PF00890 FAD binding domain,
PF02910 Fumarate reductase/succinate dehydrogenase
flavoprotein C-terminal domain
Length = 651
Score = 27.9 bits (59), Expect = 5.4
Identities = 17/60 (28%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Frame = -2
Query: 348 VVSVLIQRSSITARGIRRISWASDPVLCQTACLSTATNAAVEA-TEWNTLFLFNHVFEVT 172
V++ +I + R ++ + W ++ T L+TA E +W T FLF H +E T
Sbjct: 516 VIAKIIALTKEVRRELQEVMWKYVGIVRSTIRLTTAERKIAELEAKWET-FLFEHGWEQT 574
>At1g60540.1 68414.m06815 dynamin family protein similar to
SP|Q91192 Interferon-induced GTP-binding protein Mx
{Oncorhynchus mykiss}; contains Pfam profiles PF01031:
Dynamin central region, PF00350: Dynamin family,
PF02212: Dynamin GTPase effector domain
Length = 648
Score = 27.9 bits (59), Expect = 5.4
Identities = 25/95 (26%), Positives = 46/95 (48%), Gaps = 1/95 (1%)
Frame = +1
Query: 19 LLREIIMGRYSREPDNPAKSCKARGSNLRVHFK-NTYETAMAIRKMPLRRXVRYLKNVIE 195
LLR ++ G +S P++ C AR + + F N A+ + L ++ V+E
Sbjct: 369 LLRILVHGDFSEYPNDQKMHCTARLAEMLNRFSDNLQAQPQAVTEEFLMDEIK----VLE 424
Query: 196 KKECIPFRRFNGGVGRCAQASSLAQHRVAGPRNPP 300
+++CI F + R + + L+QH V G ++ P
Sbjct: 425 ERKCIGLPNF---IPRSSFLAILSQH-VDGIQDKP 455
>At5g66270.1 68418.m08356 zinc finger (CCCH-type) family protein
contains Pfam domain, PF00642: Zinc finger
C-x8-C-x5-C-x3-H type (and similar)
Length = 449
Score = 27.5 bits (58), Expect = 7.2
Identities = 17/47 (36%), Positives = 26/47 (55%), Gaps = 9/47 (19%)
Frame = -2
Query: 297 RISWASDPVLCQTA------C-LSTATN--AAVEATEWNTLFLFNHV 184
R+SWASD +LCQ C + A+N EAT++ T + +H+
Sbjct: 9 RVSWASDSMLCQVKLFLSDDCPVKVASNLPPGFEATDYATKRIISHI 55
>At4g35270.1 68417.m05012 RWP-RK domain-containing protein similar
to nodule inception protein GI:6448579 from (Lotus
japonicus); contains Pfam profile: PF02042 RWP-RK domain
Length = 974
Score = 27.5 bits (58), Expect = 7.2
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = +1
Query: 265 AQHRVAGPRNPPNSSCSY 318
AQ A P++PP+SSCS+
Sbjct: 765 AQGTAAAPKSPPSSSCSH 782
>At3g03640.1 68416.m00367 glycosyl hydrolase family 1 protein
contains Pfam PF00232 : Glycosyl hydrolase family 1
domain; TIGRFAM TIGR01233: 6-phospho-beta-galactosidase;
identical to beta-glucosidase GB:AAC31962 [Arabidopsis
thaliana]; similar to thioglucoside glucohydrolase
(GI:984052) [Arabidopsis thaliana]
Length = 531
Score = 27.5 bits (58), Expect = 7.2
Identities = 11/21 (52%), Positives = 17/21 (80%)
Frame = -3
Query: 350 LLSAF*FSVPQ*LQEEFGGFL 288
L++ F + VPQ L++E+GGFL
Sbjct: 152 LVTLFQWDVPQALEDEYGGFL 172
>At5g33320.1 68418.m03955 triose phosphate/phosphate translocator,
putative similar to SWISS-PROT:P52178 triose
phosphate/phosphate translocator [Cauliflower] {Brassica
oleracea}
Length = 408
Score = 27.1 bits (57), Expect = 9.5
Identities = 12/17 (70%), Positives = 12/17 (70%)
Frame = +3
Query: 204 VYSIPSLQRRRWSLCSS 254
V SIPSL RR W L SS
Sbjct: 43 VVSIPSLSRRSWRLASS 59
>At2g44490.1 68415.m05531 glycosyl hydrolase family 1 protein
contains Pfam PF00232 : Glycosyl hydrolase family 1
domain; TIGRFAM TIGR01233: 6-phospho-beta-galactosidase;
similar to anther-specific protein ATA27 (GI:2746341)
[Arabidopsis thaliana]
Length = 560
Score = 27.1 bits (57), Expect = 9.5
Identities = 10/21 (47%), Positives = 17/21 (80%)
Frame = -3
Query: 350 LLSAF*FSVPQ*LQEEFGGFL 288
L++ F + +PQ L++E+GGFL
Sbjct: 132 LVTIFHWDIPQDLEDEYGGFL 152
>At1g60500.1 68414.m06811 dynamin family protein similar to RBTMx2
[Oncorhynchus mykiss] GI:1399452; contains Pfam profiles
PF01031: Dynamin central region, PF00350: Dynamin
family, PF02212: Dynamin GTPase effector domain
Length = 669
Score = 27.1 bits (57), Expect = 9.5
Identities = 24/94 (25%), Positives = 47/94 (50%)
Frame = +1
Query: 19 LLREIIMGRYSREPDNPAKSCKARGSNLRVHFKNTYETAMAIRKMPLRRXVRYLKNVIEK 198
LLR ++ G +S PD+ C AR +++ F ++ + A K + +K ++++
Sbjct: 368 LLRILVQGDFSEYPDDQNMHCTARLADMLSQFSDSLQ---AKPKEVAEFLMDEIK-ILDE 423
Query: 199 KECIPFRRFNGGVGRCAQASSLAQHRVAGPRNPP 300
+C+ F + R A + L+QH V G ++ P
Sbjct: 424 CKCVGLPNF---IPRSAFLAILSQH-VDGIQDKP 453
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,697,845
Number of Sequences: 28952
Number of extensions: 253546
Number of successful extensions: 623
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 608
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 619
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1190791976
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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