Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0688
         (598 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory recept...    22   3.4  
AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory recept...    22   3.4  
AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory recept...    22   3.4  
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    22   4.5  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    22   4.5  
DQ855490-1|ABH88177.1|  133|Tribolium castaneum chemosensory pro...    21   6.0  

>AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory receptor
           candidate 47 protein.
          Length = 387

 Score = 22.2 bits (45), Expect = 3.4
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = -1

Query: 331 LFKSSSYLSNEIWQNSNCSSWVLN 260
           L+ +++YL      N NC+ W +N
Sbjct: 156 LYHTTAYLHIITMINMNCALWYIN 179


>AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory receptor
           candidate 26 protein.
          Length = 387

 Score = 22.2 bits (45), Expect = 3.4
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = -1

Query: 331 LFKSSSYLSNEIWQNSNCSSWVLN 260
           L+ +++YL      N NC+ W +N
Sbjct: 156 LYHTTAYLHIITMINMNCALWYIN 179


>AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory receptor
           candidate 6 protein.
          Length = 387

 Score = 22.2 bits (45), Expect = 3.4
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = -1

Query: 331 LFKSSSYLSNEIWQNSNCSSWVLN 260
           L+ +++YL      N NC+ W +N
Sbjct: 156 LYHTTAYLHIITMINMNCALWYIN 179


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 21.8 bits (44), Expect = 4.5
 Identities = 6/13 (46%), Positives = 10/13 (76%)
 Frame = -1

Query: 487 ILSVSCKRDPNFW 449
           + S++ K DPN+W
Sbjct: 247 VFSLTHKEDPNYW 259


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 21.8 bits (44), Expect = 4.5
 Identities = 6/13 (46%), Positives = 10/13 (76%)
 Frame = -1

Query: 487 ILSVSCKRDPNFW 449
           + S++ K DPN+W
Sbjct: 254 VFSLTHKEDPNYW 266


>DQ855490-1|ABH88177.1|  133|Tribolium castaneum chemosensory
           protein 4 protein.
          Length = 133

 Score = 21.4 bits (43), Expect = 6.0
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = +3

Query: 360 RNEKLFFSLLDCDIEK 407
           +NE+L  S +DC +EK
Sbjct: 40  KNERLLKSYVDCLLEK 55


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 123,434
Number of Sequences: 336
Number of extensions: 2412
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15039504
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)