Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0688
(598 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_0670 + 31069976-31070073,31070461-31070581,31070669-310707... 63 2e-10
01_01_0629 - 4738519-4738607,4738700-4738828,4738921-4739011,473... 62 2e-10
05_01_0585 - 5237547-5237930,5237995-5238072,5238163-5238405,523... 61 6e-10
01_06_0551 + 30159789-30159946,30160509-30160629,30160714-301607... 58 4e-09
02_05_0228 - 27010982-27011272,27011401-27011506,27011616-270117... 56 3e-08
10_08_0551 + 18702081-18702251,18702328-18702424,18702533-187026... 50 2e-06
07_03_0474 + 18534071-18534238,18534349-18534445,18534992-185351... 44 1e-04
02_02_0241 - 8204430-8205398 28 4.9
08_01_0637 + 5537421-5539547 28 6.5
12_01_0101 - 779047-779298,779459-779711,779857-780005,780033-78... 27 8.6
11_01_0101 - 738305-738556,738723-738977,739306-739554,739649-73... 27 8.6
03_02_0917 + 12372122-12372422,12372487-12372524,12373103-123731... 27 8.6
>01_06_0670 +
31069976-31070073,31070461-31070581,31070669-31070743,
31070863-31071014,31071171-31071276,31071409-31071474,
31071562-31071657,31071764-31071835,31071925-31072008,
31072147-31072245,31072721-31072768,31072857-31072910,
31072991-31073089,31073182-31073271,31073371-31073448,
31073584-31073658,31073806-31073896,31074014-31074142,
31074235-31074323
Length = 573
Score = 62.9 bits (146), Expect = 2e-10
Identities = 35/83 (42%), Positives = 51/83 (61%)
Frame = +3
Query: 348 ELQDRNEKLFFSLLDCDIEKFMPIVYTPTVGLACQKFGSRLQETERIXYHYFMIKDTYLI 527
+LQ+RNE+LF+ LL ++E+ +P+VYTPTVG ACQK+GS + + + Y K L
Sbjct: 96 DLQERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGL-YISLKEKGRILE 154
Query: 528 F*RTGPEHAXPRXRFLQTGERIL 596
R PE + + + GERIL
Sbjct: 155 LLRNWPEKSI-QVIVVTDGERIL 176
Score = 27.9 bits (59), Expect = 6.5
Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Frame = +2
Query: 83 GLQPKYLDQRRNMHE-ITGNIICPNMLRGIDHIKDPRLNKGLAFTLEE 223
G++ Y + R + IT +C + G ++DPR NKGL+FT +E
Sbjct: 8 GVEDAYGEDRATEDQPITPWAVC--VASGHSLLRDPRHNKGLSFTEKE 53
>01_01_0629 -
4738519-4738607,4738700-4738828,4738921-4739011,
4739103-4739177,4739529-4739618,4739742-4739840,
4739934-4739987,4740084-4740131,4740232-4740330,
4740458-4740541,4740650-4740721,4740812-4740907,
4741012-4741077,4741148-4741253,4741350-4741501,
4741634-4741708,4741792-4741912,4742968-4743209,
4743328-4743381
Length = 613
Score = 62.5 bits (145), Expect = 2e-10
Identities = 35/83 (42%), Positives = 51/83 (61%)
Frame = +3
Query: 348 ELQDRNEKLFFSLLDCDIEKFMPIVYTPTVGLACQKFGSRLQETERIXYHYFMIKDTYLI 527
+LQ+RNE+LF+ LL ++E+ +P+VYTPTVG ACQK+GS ++ + + Y K L
Sbjct: 162 DLQERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRQPQGL-YVSLKDKGKVLD 220
Query: 528 F*RTGPEHAXPRXRFLQTGERIL 596
R PE + + GERIL
Sbjct: 221 VLRNWPERNI-QVIVVTDGERIL 242
>05_01_0585 -
5237547-5237930,5237995-5238072,5238163-5238405,
5238515-5238661,5238780-5238863,5238969-5239040,
5239153-5239248,5239345-5239410,5239537-5239642,
5239749-5239900,5240238-5240433,5240791-5240879
Length = 570
Score = 61.3 bits (142), Expect = 6e-10
Identities = 34/83 (40%), Positives = 51/83 (61%)
Frame = +3
Query: 348 ELQDRNEKLFFSLLDCDIEKFMPIVYTPTVGLACQKFGSRLQETERIXYHYFMIKDTYLI 527
+LQ+RNE+LF+ LL ++E+ +P+VYTPTVG ACQK+GS + + + Y K L
Sbjct: 93 DLQERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIYRRPQGL-YISLKDKGKILE 151
Query: 528 F*RTGPEHAXPRXRFLQTGERIL 596
+ PE + + + GERIL
Sbjct: 152 VLKNWPERSI-QVIVVTDGERIL 173
>01_06_0551 +
30159789-30159946,30160509-30160629,30160714-30160788,
30160877-30161028,30161103-30161208,30161298-30161363,
30161623-30161694,30161849-30161932,30162108-30162206,
30162841-30162888,30162986-30163039,30163137-30163235,
30163321-30163410,30163503-30163580,30163699-30163773,
30163866-30163956,30164282-30164410,30164501-30164589
Length = 561
Score = 58.4 bits (135), Expect = 4e-09
Identities = 33/83 (39%), Positives = 49/83 (59%)
Frame = +3
Query: 348 ELQDRNEKLFFSLLDCDIEKFMPIVYTPTVGLACQKFGSRLQETERIXYHYFMIKDTYLI 527
+LQ+ NE+LF+ LL ++E+ +P+VYTPTVG ACQK+GS + + Y K L
Sbjct: 116 DLQEGNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFSRPQGL-YISLKEKGKILE 174
Query: 528 F*RTGPEHAXPRXRFLQTGERIL 596
+ PE + + + GERIL
Sbjct: 175 VLKNWPERSI-QVIVVTDGERIL 196
>02_05_0228 -
27010982-27011272,27011401-27011506,27011616-27011767,
27011919-27011930
Length = 186
Score = 55.6 bits (128), Expect = 3e-08
Identities = 32/83 (38%), Positives = 49/83 (59%)
Frame = +3
Query: 348 ELQDRNEKLFFSLLDCDIEKFMPIVYTPTVGLACQKFGSRLQETERIXYHYFMIKDTYLI 527
E +R+E+LF+ LL ++E+ +P+VYTPTVG ACQK+GS + + + Y K L
Sbjct: 2 EKGERSERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIYRRPQGL-YISLKDKGKILE 60
Query: 528 F*RTGPEHAXPRXRFLQTGERIL 596
+ PE + + + GERIL
Sbjct: 61 VLKNWPERSI-QVIVITDGERIL 82
>10_08_0551 +
18702081-18702251,18702328-18702424,18702533-18702651,
18702757-18702924,18703296-18703424,18703659-18703719,
18703813-18703916,18704173-18704279,18704319-18704493,
18704657-18704770,18704883-18704966,18705536-18705608,
18705689-18705775,18705863-18705917,18706007-18706078,
18706470-18706532,18706640-18706754,18706844-18706915
Length = 621
Score = 49.6 bits (113), Expect = 2e-06
Identities = 23/55 (41%), Positives = 33/55 (60%)
Frame = +3
Query: 351 LQDRNEKLFFSLLDCDIEKFMPIVYTPTVGLACQKFGSRLQETERIXYHYFMIKD 515
L DRNE L++ +L +I+ F PI+YTPTVGL C+ + + + YF KD
Sbjct: 119 LHDRNETLYYRVLIDNIKDFAPIIYTPTVGLVCENYSGLFRRPRGM---YFSAKD 170
>07_03_0474 +
18534071-18534238,18534349-18534445,18534992-18535122,
18535191-18535286,18535459-18535464,18535521-18535688,
18535892-18536020,18536613-18536673,18536928-18537031,
18537137-18537220,18538433-18538461,18538506-18538617,
18539200-18539313,18539767-18539832,18540237-18540309,
18540396-18540482,18540710-18540764,18540869-18540940,
18541039-18541101,18541177-18541294,18541377-18541451
Length = 635
Score = 43.6 bits (98), Expect = 1e-04
Identities = 21/39 (53%), Positives = 28/39 (71%), Gaps = 3/39 (7%)
Frame = +3
Query: 351 LQDRNEKLFFS---LLDCDIEKFMPIVYTPTVGLACQKF 458
L DRNE +++ L+D +IE+ PIVYTPTVGL CQ +
Sbjct: 154 LHDRNETMYYKAEVLID-NIEEHAPIVYTPTVGLVCQNY 191
>02_02_0241 - 8204430-8205398
Length = 322
Score = 28.3 bits (60), Expect = 4.9
Identities = 11/25 (44%), Positives = 16/25 (64%), Gaps = 1/25 (4%)
Frame = +2
Query: 410 HAYCVHAYGWXG-VPEIWVSFTGDR 481
H YCV+A W P+++ S +GDR
Sbjct: 153 HEYCVYAAAWSARHPDVFASASGDR 177
>08_01_0637 + 5537421-5539547
Length = 708
Score = 27.9 bits (59), Expect = 6.5
Identities = 12/40 (30%), Positives = 21/40 (52%)
Frame = -1
Query: 325 KSSSYLSNEIWQNSNCSSWVLNLGPKVREYLKLXLFEREG 206
K + ++ E W N+ SW + + ++E L + EREG
Sbjct: 395 KMARWMGVEDWWNTKAYSWPIPVSECIQELLVNQVLEREG 434
>12_01_0101 -
779047-779298,779459-779711,779857-780005,780033-780281,
780377-780571,780681-780788,780935-781156,781669-781986,
781988-782615,783059-783135,783161-783267,783491-783619,
783763-783820,783902-783984,784458-784539,784617-784693,
784827-784910,784999-785068,785146-785234,785319-786008,
786485-786797
Length = 1410
Score = 27.5 bits (58), Expect = 8.6
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = -1
Query: 577 CKNLLRGXACSGPVLQNIKYV 515
CK+ RG C PV++ +K+V
Sbjct: 440 CKDTFRGRVCECPVVKGVKFV 460
>11_01_0101 -
738305-738556,738723-738977,739306-739554,739649-739843,
739953-740060,740184-740405,740806-741390,741495-741863,
742423-742529,742755-742883,743027-743084,743166-743248,
744115-744196,744274-744350,744477-744560,744649-744718,
744796-744884,744965-745654,746127-746439
Length = 1338
Score = 27.5 bits (58), Expect = 8.6
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = -1
Query: 577 CKNLLRGXACSGPVLQNIKYV 515
CK+ RG C PV++ +K+V
Sbjct: 440 CKDTFRGRVCECPVVKGVKFV 460
>03_02_0917 +
12372122-12372422,12372487-12372524,12373103-12373186,
12373796-12374504,12374641-12374729,12374834-12374903,
12374977-12375060,12375097-12375239,12375337-12375418,
12375605-12375687,12375769-12375835,12376287-12376376,
12377631-12377737,12377862-12377969
Length = 684
Score = 27.5 bits (58), Expect = 8.6
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = -1
Query: 577 CKNLLRGXACSGPVLQNIKYV 515
CK+ RG C PV++ +K+V
Sbjct: 505 CKDTFRGRVCECPVVKGVKFV 525
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,812,310
Number of Sequences: 37544
Number of extensions: 225694
Number of successful extensions: 408
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 395
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 405
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1423789920
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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