Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0688
         (598 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At2g19900.1 68415.m02326 malate oxidoreductase, putative similar...    65   4e-11
At5g25880.1 68418.m03071 malate oxidoreductase, putative similar...    60   1e-09
At5g11670.1 68418.m01364 malate oxidoreductase, putative similar...    60   1e-09
At1g79750.1 68414.m09304 malate oxidoreductase, putative similar...    56   1e-08
At4g00570.1 68417.m00080 malate oxidoreductase, putative similar...    50   9e-07
At2g13560.1 68415.m01495 malate oxidoreductase, putative similar...    50   9e-07
At4g37340.1 68417.m05289 cytochrome P450 family protein Similar ...    29   3.1  
At3g29796.1 68416.m03790 hypothetical protein                          28   5.4  
At4g37360.1 68417.m05291 cytochrome P450 family protein cytochro...    27   9.5  
At2g05290.1 68415.m00557 expressed protein similar to zinc finge...    27   9.5  

>At2g19900.1 68415.m02326 malate oxidoreductase, putative similar to
           NADP-dependent malic enzyme (EC 1.1.1.40) (NADP-ME)
           (SP:P51615) {Vitis vinifera}
          Length = 581

 Score = 64.9 bits (151), Expect = 4e-11
 Identities = 28/40 (70%), Positives = 35/40 (87%)
 Frame = +3

Query: 345 TELQDRNEKLFFSLLDCDIEKFMPIVYTPTVGLACQKFGS 464
           TELQ+RNE+LF+ LL  ++E+ +PIVYTPTVG ACQKFGS
Sbjct: 103 TELQERNERLFYKLLIDNVEELLPIVYTPTVGEACQKFGS 142



 Score = 29.1 bits (62), Expect = 2.4
 Identities = 12/20 (60%), Positives = 15/20 (75%)
 Frame = +2

Query: 164 GIDHIKDPRLNKGLAFTLEE 223
           G   ++DPR NKGLAFT +E
Sbjct: 42  GYSLLRDPRYNKGLAFTEKE 61


>At5g25880.1 68418.m03071 malate oxidoreductase, putative similar to
           NADP-dependent malic enzyme (EC 1.1.1.40) (NADP-ME)
           (SP:P12628) {Phaseolus vulgaris}
          Length = 588

 Score = 60.1 bits (139), Expect = 1e-09
 Identities = 24/39 (61%), Positives = 34/39 (87%)
 Frame = +3

Query: 348 ELQDRNEKLFFSLLDCDIEKFMPIVYTPTVGLACQKFGS 464
           +LQ+RNE+LF+ LL  ++E+ +P+VYTPTVG ACQK+GS
Sbjct: 111 DLQERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGS 149



 Score = 29.1 bits (62), Expect = 2.4
 Identities = 14/33 (42%), Positives = 18/33 (54%)
 Frame = +2

Query: 164 GIDHIKDPRLNKGLAFTLEEXKL*VFTDFWPQI 262
           G   ++DPR NKGLAFT +E      T   P +
Sbjct: 49  GYTLMRDPRYNKGLAFTDKERDAHYITGLLPPV 81


>At5g11670.1 68418.m01364 malate oxidoreductase, putative similar to
           NADP-dependent malic enzyme (EC 1.1.1.40) (NADP-ME)
           (SP|P12628) {Phaseolus vulgaris}
          Length = 588

 Score = 60.1 bits (139), Expect = 1e-09
 Identities = 24/39 (61%), Positives = 34/39 (87%)
 Frame = +3

Query: 348 ELQDRNEKLFFSLLDCDIEKFMPIVYTPTVGLACQKFGS 464
           +LQ+RNE+LF+ LL  ++E+ +P+VYTPTVG ACQK+GS
Sbjct: 111 DLQERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGS 149



 Score = 29.1 bits (62), Expect = 2.4
 Identities = 14/33 (42%), Positives = 18/33 (54%)
 Frame = +2

Query: 164 GIDHIKDPRLNKGLAFTLEEXKL*VFTDFWPQI 262
           G   ++DPR NKGLAFT +E      T   P +
Sbjct: 49  GYTLMRDPRYNKGLAFTDKERDAHYLTGLLPPV 81


>At1g79750.1 68414.m09304 malate oxidoreductase, putative similar to
           malate oxidoreductase (NADP-dependent malic enzyme)
           GB:P34105 (Populus balsamifera subsp. trichocarpa)
          Length = 646

 Score = 56.4 bits (130), Expect = 1e-08
 Identities = 22/39 (56%), Positives = 32/39 (82%)
 Frame = +3

Query: 348 ELQDRNEKLFFSLLDCDIEKFMPIVYTPTVGLACQKFGS 464
           +LQ+ NE+LF+ LL   +E+ +P++YTPTVG ACQK+GS
Sbjct: 169 DLQETNERLFYKLLIDHVEELLPVIYTPTVGEACQKYGS 207


>At4g00570.1 68417.m00080 malate oxidoreductase, putative similar to
           NAD-dependent malic enzyme 59 kDa isoform, mitochondrial
           precursor (EC 1.1.1.39) (NAD-ME) (SP:P37225) {Solanum
           tuberosum}
          Length = 607

 Score = 50.4 bits (115), Expect = 9e-07
 Identities = 24/55 (43%), Positives = 33/55 (60%)
 Frame = +3

Query: 351 LQDRNEKLFFSLLDCDIEKFMPIVYTPTVGLACQKFGSRLQETERIXYHYFMIKD 515
           L DRNE L++ +L  +I+ F PI+YTPTVGL CQ +    +    +   YF  KD
Sbjct: 112 LHDRNETLYYRVLIDNIKDFAPIIYTPTVGLVCQNYSGLYRRPRGM---YFSAKD 163


>At2g13560.1 68415.m01495 malate oxidoreductase, putative similar to
           NAD-dependent malic enzyme 62 kDa isoform, mitochondrial
           precursor (EC 1.1.1.39) (NAD-ME) (SP:P37221) {Solanum
           tuberosum}
          Length = 623

 Score = 50.4 bits (115), Expect = 9e-07
 Identities = 20/36 (55%), Positives = 28/36 (77%)
 Frame = +3

Query: 351 LQDRNEKLFFSLLDCDIEKFMPIVYTPTVGLACQKF 458
           L DRNE +++ +L  +IE++ PIVYTPTVGL CQ +
Sbjct: 119 LHDRNETMYYKVLINNIEEYAPIVYTPTVGLVCQNY 154



 Score = 28.3 bits (60), Expect = 4.1
 Identities = 11/21 (52%), Positives = 15/21 (71%)
 Frame = +2

Query: 161 RGIDHIKDPRLNKGLAFTLEE 223
           +G+D + DP  NKG AFT+ E
Sbjct: 45  QGLDILHDPWFNKGTAFTMTE 65


>At4g37340.1 68417.m05289 cytochrome P450 family protein Similar to
           Cytochrome P450 91A1 (SP:Q9FG65) [Arabidopsis thaliana];
          Length = 500

 Score = 28.7 bits (61), Expect = 3.1
 Identities = 18/50 (36%), Positives = 28/50 (56%)
 Frame = -2

Query: 213 VKARPLLSRGSFIWSMPLSMFGQIMLPVISCIFLLWSKYLGCKPFIILRL 64
           +K RP L   S  W++P+    +++ P +  +FL  S+ LG  P I LRL
Sbjct: 24  IKRRPNLPP-SPSWALPVIGHLRLLKPPLHRVFLSVSESLGDAPIISLRL 72


>At3g29796.1 68416.m03790 hypothetical protein
          Length = 463

 Score = 27.9 bits (59), Expect = 5.4
 Identities = 13/29 (44%), Positives = 17/29 (58%)
 Frame = +2

Query: 23  FKSFLTFIFERTKFKRNIINGLQPKYLDQ 109
           F +FL  I   T+F RN +  L+ KYL Q
Sbjct: 363 FATFLRGIMTSTQFPRNCLANLRGKYLSQ 391


>At4g37360.1 68417.m05291 cytochrome P450 family protein cytochrome
           P450 monooxygenase, Arabidopsis thaliana, PID:d1029478
          Length = 499

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 13/37 (35%), Positives = 22/37 (59%)
 Frame = -2

Query: 174 WSMPLSMFGQIMLPVISCIFLLWSKYLGCKPFIILRL 64
           W++P+    +++ P +  +FL  S+ LG  P I LRL
Sbjct: 36  WALPVIGHLRLLKPPLHRVFLSVSQSLGDAPIISLRL 72


>At2g05290.1 68415.m00557 expressed protein similar to zinc finger
           protein [Arabidopsis thaliana] GI:976277
          Length = 383

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 14/41 (34%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
 Frame = +2

Query: 74  IINGLQPKYLDQRRNMHEITGNIICPNMLRGIDHIKD-PRL 193
           +IN  QP +    RN++ I G  + P+  R    I D PR+
Sbjct: 22  LINSDQPNFFSTERNLNSIMGRFLNPDKQRMSKWILDMPRI 62


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,844,968
Number of Sequences: 28952
Number of extensions: 197107
Number of successful extensions: 437
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 425
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 437
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1190791976
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)