Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0680
(598 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_16632| Best HMM Match : HSP20 (HMM E-Value=1e-12) 53 2e-07
SB_21425| Best HMM Match : HSP20 (HMM E-Value=1.9e-26) 50 1e-06
SB_38963| Best HMM Match : HSP20 (HMM E-Value=7.3e-26) 47 1e-05
SB_37349| Best HMM Match : HSP20 (HMM E-Value=7.3e-26) 47 1e-05
SB_21424| Best HMM Match : HSP20 (HMM E-Value=0) 45 4e-05
SB_3291| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 4e-05
SB_58906| Best HMM Match : HSP20 (HMM E-Value=3e-26) 44 1e-04
SB_49292| Best HMM Match : HSP20 (HMM E-Value=1.9e-29) 44 1e-04
SB_58907| Best HMM Match : HSP20 (HMM E-Value=4.2e-05) 43 2e-04
SB_7361| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.076
SB_24406| Best HMM Match : DUF536 (HMM E-Value=1.5) 31 0.53
SB_13144| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.2
SB_39821| Best HMM Match : Fun_ATP-synt_8 (HMM E-Value=3.1) 29 3.8
SB_8660| Best HMM Match : Carboxyl_trans (HMM E-Value=0) 29 3.8
SB_6138| Best HMM Match : 7tm_1 (HMM E-Value=2e-19) 29 3.8
SB_23205| Best HMM Match : Helicase_C (HMM E-Value=3.9e-14) 28 6.6
SB_30685| Best HMM Match : RRM_1 (HMM E-Value=2e-07) 27 8.7
>SB_16632| Best HMM Match : HSP20 (HMM E-Value=1e-12)
Length = 210
Score = 53.2 bits (122), Expect = 2e-07
Identities = 25/56 (44%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Frame = +1
Query: 277 DKFQV-NLDVQHFAPEEISVKTADGYIVVEGKHEEKKDQHGYISRQFTRRYALPXG 441
DK ++ LDV+++ PEEIS+K G I ++GKH + + +HGY + +F R Y LP G
Sbjct: 38 DKVEIATLDVKNYRPEEISLKVEHGRIKIDGKH-KSEGEHGYETSEFHRSYNLPDG 92
>SB_21425| Best HMM Match : HSP20 (HMM E-Value=1.9e-26)
Length = 185
Score = 50.4 bits (115), Expect = 1e-06
Identities = 26/58 (44%), Positives = 36/58 (62%), Gaps = 1/58 (1%)
Frame = +1
Query: 271 DKDKFQV-NLDVQHFAPEEISVKTADGYIVVEGKHEEKKDQHGYISRQFTRRYALPXG 441
D DKFQ+ LDV+ F PEEI+ K +G I V G + ++ G+ S++F R Y LP G
Sbjct: 2 DADKFQIATLDVREFKPEEITCKVENGKIKVSGLQRHESEE-GFDSKEFRRCYNLPEG 58
Score = 44.8 bits (101), Expect = 5e-05
Identities = 26/68 (38%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
Frame = +1
Query: 235 AAARDLGPAFKSDKDKFQVNLDVQHFAPEEISVKTADGYIVVEGKHEEKKDQHGYI-SRQ 411
A + PA K D KF + LDV F PEE+ VK + V + E ++HG+ +RQ
Sbjct: 85 ATTENKAPATKDDT-KFTLALDVSDFKPEEVDVKVYGHELSVRARQE--CEEHGFFTARQ 141
Query: 412 FTRRYALP 435
F R + LP
Sbjct: 142 FNRHFVLP 149
>SB_38963| Best HMM Match : HSP20 (HMM E-Value=7.3e-26)
Length = 190
Score = 46.8 bits (106), Expect = 1e-05
Identities = 21/59 (35%), Positives = 39/59 (66%), Gaps = 1/59 (1%)
Frame = +1
Query: 268 SDKDKFQV-NLDVQHFAPEEISVKTADGYIVVEGKHEEKKDQHGYISRQFTRRYALPXG 441
++++K ++ LDV+ + PEEIS K +G++ V+G+H + G+ ++F R +ALP G
Sbjct: 2 ANENKLEIAKLDVREYRPEEISFKVENGFVKVQGRH-VNEGPFGFELKEFRRTFALPEG 59
Score = 40.3 bits (90), Expect = 0.001
Identities = 20/63 (31%), Positives = 31/63 (49%)
Frame = +1
Query: 247 DLGPAFKSDKDKFQVNLDVQHFAPEEISVKTADGYIVVEGKHEEKKDQHGYISRQFTRRY 426
D G DKF + +DV F P+ I V+ ++V HE + + H Y + F R++
Sbjct: 87 DGGEEESKGDDKFSMAMDVTGFPPDSIKVQVLGNELLVSANHEVEHEGH-YHAMHFNRQF 145
Query: 427 ALP 435
LP
Sbjct: 146 VLP 148
>SB_37349| Best HMM Match : HSP20 (HMM E-Value=7.3e-26)
Length = 190
Score = 46.8 bits (106), Expect = 1e-05
Identities = 21/59 (35%), Positives = 39/59 (66%), Gaps = 1/59 (1%)
Frame = +1
Query: 268 SDKDKFQV-NLDVQHFAPEEISVKTADGYIVVEGKHEEKKDQHGYISRQFTRRYALPXG 441
++++K ++ LDV+ + PEEIS K +G++ V+G+H + G+ ++F R +ALP G
Sbjct: 2 ANENKLEIAKLDVREYRPEEISFKVENGFVKVQGRH-VNEGPFGFELKEFRRTFALPEG 59
Score = 40.3 bits (90), Expect = 0.001
Identities = 20/63 (31%), Positives = 31/63 (49%)
Frame = +1
Query: 247 DLGPAFKSDKDKFQVNLDVQHFAPEEISVKTADGYIVVEGKHEEKKDQHGYISRQFTRRY 426
D G DKF + +DV F P+ I V+ ++V HE + + H Y + F R++
Sbjct: 87 DGGEEESKGDDKFSMAMDVTGFPPDSIKVQVLGNELLVSANHEVEHEGH-YHAMHFNRQF 145
Query: 427 ALP 435
LP
Sbjct: 146 VLP 148
>SB_21424| Best HMM Match : HSP20 (HMM E-Value=0)
Length = 424
Score = 45.2 bits (102), Expect = 4e-05
Identities = 20/59 (33%), Positives = 38/59 (64%), Gaps = 1/59 (1%)
Frame = +1
Query: 268 SDKDKFQV-NLDVQHFAPEEISVKTADGYIVVEGKHEEKKDQHGYISRQFTRRYALPXG 441
++++K ++ LDV+ + PEEIS K +G++ V+G+H + G+ ++F R + LP G
Sbjct: 2 ANENKLEIAKLDVREYRPEEISFKVENGFVKVQGRH-VNEGPFGFELKEFRRTFTLPEG 59
Score = 44.4 bits (100), Expect = 7e-05
Identities = 20/56 (35%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Frame = +1
Query: 277 DKFQV-NLDVQHFAPEEISVKTADGYIVVEGKHEEKKDQHGYISRQFTRRYALPXG 441
D+ ++ LDV+ + PEEIS K +G++ V+G+H + G+ ++F R + LP G
Sbjct: 239 DELEIAKLDVREYRPEEISFKVENGFVKVQGRH-VNEGPFGFELKEFRRTFTLPEG 293
Score = 40.3 bits (90), Expect = 0.001
Identities = 20/63 (31%), Positives = 31/63 (49%)
Frame = +1
Query: 247 DLGPAFKSDKDKFQVNLDVQHFAPEEISVKTADGYIVVEGKHEEKKDQHGYISRQFTRRY 426
D G DKF + +DV F P+ I V+ ++V HE + + H Y + F R++
Sbjct: 87 DGGEEESKGDDKFSMAMDVTGFPPDSIKVQVLGNELLVSANHEVEHEGH-YHAMHFNRQF 145
Query: 427 ALP 435
LP
Sbjct: 146 VLP 148
Score = 40.3 bits (90), Expect = 0.001
Identities = 20/63 (31%), Positives = 31/63 (49%)
Frame = +1
Query: 247 DLGPAFKSDKDKFQVNLDVQHFAPEEISVKTADGYIVVEGKHEEKKDQHGYISRQFTRRY 426
D G DKF + +DV F P+ I V+ ++V HE + + H Y + F R++
Sbjct: 321 DGGEEESKGDDKFSMAMDVTGFPPDSIKVQVLGNELLVSANHEVEHEGH-YHAMHFNRQF 379
Query: 427 ALP 435
LP
Sbjct: 380 VLP 382
>SB_3291| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 760
Score = 45.2 bits (102), Expect = 4e-05
Identities = 20/59 (33%), Positives = 38/59 (64%), Gaps = 1/59 (1%)
Frame = +1
Query: 268 SDKDKFQV-NLDVQHFAPEEISVKTADGYIVVEGKHEEKKDQHGYISRQFTRRYALPXG 441
++++K ++ LDV+ + PEEIS K +G++ V+G+H + G+ ++F R + LP G
Sbjct: 2 ANENKLEIAKLDVREYRPEEISFKVENGFVKVQGRH-VNEGPFGFELKEFRRTFTLPEG 59
Score = 40.3 bits (90), Expect = 0.001
Identities = 20/63 (31%), Positives = 31/63 (49%)
Frame = +1
Query: 247 DLGPAFKSDKDKFQVNLDVQHFAPEEISVKTADGYIVVEGKHEEKKDQHGYISRQFTRRY 426
D G DKF + +DV F P+ I V+ ++V HE + + H Y + F R++
Sbjct: 87 DGGEEESKGDDKFSMAMDVTGFPPDSIKVQVLGNELLVSANHEVEHEGH-YHAMHFNRQF 145
Query: 427 ALP 435
LP
Sbjct: 146 VLP 148
>SB_58906| Best HMM Match : HSP20 (HMM E-Value=3e-26)
Length = 695
Score = 43.6 bits (98), Expect = 1e-04
Identities = 20/59 (33%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Frame = +1
Query: 268 SDKDKFQV-NLDVQHFAPEEISVKTADGYIVVEGKHEEKKDQHGYISRQFTRRYALPXG 441
++++K ++ LDV+ + PEEIS K +G + V+G+H + G+ ++F R + LP G
Sbjct: 3 NNENKLEIAKLDVREYRPEEISFKVENGVVKVQGRH-VNEGPFGFELKEFRRTFTLPEG 60
Score = 42.7 bits (96), Expect = 2e-04
Identities = 21/61 (34%), Positives = 33/61 (54%)
Frame = +1
Query: 253 GPAFKSDKDKFQVNLDVQHFAPEEISVKTADGYIVVEGKHEEKKDQHGYISRQFTRRYAL 432
G +S DKF + +DV+ F PE I V+ ++V HE + + H Y + F R++ L
Sbjct: 89 GAKKESKDDKFSMAMDVKGFPPEAIKVQVLGNELLVSANHEVEHEGH-YHAMHFNRQFIL 147
Query: 433 P 435
P
Sbjct: 148 P 148
>SB_49292| Best HMM Match : HSP20 (HMM E-Value=1.9e-29)
Length = 189
Score = 43.6 bits (98), Expect = 1e-04
Identities = 19/49 (38%), Positives = 31/49 (63%)
Frame = +1
Query: 295 LDVQHFAPEEISVKTADGYIVVEGKHEEKKDQHGYISRQFTRRYALPXG 441
LDV+ + PEEIS K +G + V+G+H + + G+ ++F R + LP G
Sbjct: 12 LDVKEYRPEEISFKVENGVVKVQGRH-VNEGEFGFELKEFRRTFTLPEG 59
Score = 43.6 bits (98), Expect = 1e-04
Identities = 20/57 (35%), Positives = 32/57 (56%)
Frame = +1
Query: 265 KSDKDKFQVNLDVQHFAPEEISVKTADGYIVVEGKHEEKKDQHGYISRQFTRRYALP 435
K+ +DKF + +DV F PE I V+ ++V HE + + H Y + F R++ LP
Sbjct: 92 KAKEDKFSMAIDVAGFPPESIKVQVLGNELLVNANHEVEHEGH-YHAMHFNRQFVLP 147
>SB_58907| Best HMM Match : HSP20 (HMM E-Value=4.2e-05)
Length = 259
Score = 43.2 bits (97), Expect = 2e-04
Identities = 24/67 (35%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Frame = +1
Query: 238 AARDLGPAFKSDKDKFQVNLDVQHFAPEEISVKTADGYIVVEGKHEEKKDQHGYI-SRQF 414
A ++ A D KF + LDV F PEE+ VK + V + E ++HG+ +RQF
Sbjct: 13 ATKENQSAATKDDTKFTLALDVSDFKPEEVDVKVYGHELSVRARQE--CEEHGFFTARQF 70
Query: 415 TRRYALP 435
R + LP
Sbjct: 71 NRHFVLP 77
>SB_7361| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 831
Score = 34.3 bits (75), Expect = 0.076
Identities = 17/60 (28%), Positives = 30/60 (50%)
Frame = -1
Query: 538 GVHXPLLAAPPGCDYRQHTI*RQPGLXRFSRYSXPAKRSDE*IDAICNHADLSSPRVCLQ 359
GVH + A+ D + ++ GL FS P KRS+ +A C H + + ++C++
Sbjct: 188 GVHEDITASWMAFDNLHRPLFKEHGLIHFSNRQPPPKRSN---NAFCKHVNATGAKICVK 244
>SB_24406| Best HMM Match : DUF536 (HMM E-Value=1.5)
Length = 436
Score = 31.5 bits (68), Expect = 0.53
Identities = 11/22 (50%), Positives = 18/22 (81%)
Frame = +1
Query: 367 KHEEKKDQHGYISRQFTRRYAL 432
KHEE++D+HGY+ + T ++AL
Sbjct: 72 KHEEREDRHGYLKDKVTLQHAL 93
>SB_13144| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 266
Score = 29.5 bits (63), Expect = 2.2
Identities = 11/35 (31%), Positives = 18/35 (51%)
Frame = +1
Query: 331 VKTADGYIVVEGKHEEKKDQHGYISRQFTRRYALP 435
+++A GY+V G H K + G + + R LP
Sbjct: 10 IRSARGYVVTSGSHTSKSEVRGIMEETCSNRNPLP 44
>SB_39821| Best HMM Match : Fun_ATP-synt_8 (HMM E-Value=3.1)
Length = 213
Score = 28.7 bits (61), Expect = 3.8
Identities = 19/78 (24%), Positives = 37/78 (47%), Gaps = 1/78 (1%)
Frame = -2
Query: 450 AVTAXRQSVATSELTRYVTMLIFLLLVFAFNHDVAVRRFNRD-FFRGEMLDVQVYLELIL 274
A++ R S S RY+ +L++ +V + + +AV + ++V +Y +++
Sbjct: 81 AISLYRGSTVLSY--RYIEVLLYCRIVISRFYCIAVSLYRGSTVLPYRYIEVPLYCRIVI 138
Query: 273 ITFECWTKVSSRGSKVTP 220
+ F C RGS V P
Sbjct: 139 LRFYCIAVSLYRGSTVLP 156
>SB_8660| Best HMM Match : Carboxyl_trans (HMM E-Value=0)
Length = 1311
Score = 28.7 bits (61), Expect = 3.8
Identities = 18/54 (33%), Positives = 30/54 (55%)
Frame = +2
Query: 317 RKKSLLKRRTATSWLKANTRRRKISMVTYRVNSLVATLCRXAVTAESVESRLSS 478
R S+L R ++ + + + ++S V R+NS+ + LC + SV SRLSS
Sbjct: 478 RSSSVLCRLSSVPY-RLSLVTLRLSSVPSRLNSIPSRLCSISSRLSSVPSRLSS 530
>SB_6138| Best HMM Match : 7tm_1 (HMM E-Value=2e-19)
Length = 494
Score = 28.7 bits (61), Expect = 3.8
Identities = 15/63 (23%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
Frame = -2
Query: 405 RYVTMLIFLLLVFAFNHDVAVRRFNRD-FFRGEMLDVQVYLELILITFECWTKVSSRGSK 229
RY+ + ++ +V + H +A+ + ++V VY +++ F C RGS
Sbjct: 359 RYIEVPLYCRIVISRFHSIAISLYRGSTVLPYRYIEVPVYCHIVISMFHCIDVSLYRGST 418
Query: 228 VTP 220
V P
Sbjct: 419 VLP 421
>SB_23205| Best HMM Match : Helicase_C (HMM E-Value=3.9e-14)
Length = 1197
Score = 27.9 bits (59), Expect = 6.6
Identities = 22/88 (25%), Positives = 43/88 (48%), Gaps = 4/88 (4%)
Frame = +1
Query: 142 FGLGLTPEDFLSAAAGPLVSREYYRPWRHLAAA-ARDLGPAFKSDKDKFQVNLDVQHFAP 318
FG+G TP D++ + S+EY + + +LGP F S K+ + + + A
Sbjct: 1083 FGMGYTP-DYIVYHELVMTSKEYMQCVTAVDGNWLAELGPMFYSVKESTRSRAENRRRAK 1141
Query: 319 EEISV---KTADGYIVVEGKHEEKKDQH 393
EE+S + + ++ + +EK ++H
Sbjct: 1142 EEMSAMERELEEASEQIKAREQEKLNKH 1169
>SB_30685| Best HMM Match : RRM_1 (HMM E-Value=2e-07)
Length = 349
Score = 27.5 bits (58), Expect = 8.7
Identities = 15/45 (33%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Frame = +1
Query: 259 AFKSDKD-KFQVNLDVQHFAPEEISVKTADGYIVVEGKHEEKKDQ 390
AF +KD K+Q N+ ++ F + SVK AD +E + + +K++
Sbjct: 136 AFVEEKDTKYQDNVLIKKFKDDYYSVKNADKKKRLEEEQKARKEE 180
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,765,139
Number of Sequences: 59808
Number of extensions: 400539
Number of successful extensions: 968
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 850
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 963
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1439498375
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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