BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0680
(598 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF283275-1|AAG15376.1| 133|Anopheles gambiae small heat shock p... 99 9e-23
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein. 24 3.2
AJ459961-1|CAD31060.1| 700|Anopheles gambiae prophenoloxidase 8... 24 3.2
AF007166-1|AAB62929.1| 360|Anopheles gambiae serine protease 14... 23 7.5
AY347946-1|AAR28374.1| 640|Anopheles gambiae putative NPY GPCR ... 23 9.9
>AF283275-1|AAG15376.1| 133|Anopheles gambiae small heat shock
protein protein.
Length = 133
Score = 99.1 bits (236), Expect = 9e-23
Identities = 44/67 (65%), Positives = 50/67 (74%)
Frame = +1
Query: 247 DLGPAFKSDKDKFQVNLDVQHFAPEEISVKTADGYIVVEGKHEEKKDQHGYISRQFTRRY 426
D G A KDKFQ+NLDVQ F+PEEISVK D ++VEGKHEEK+D HGY+SR F RRY
Sbjct: 3 DSGSAVNISKDKFQINLDVQQFSPEEISVKYVDNCVLVEGKHEEKQDDHGYVSRHFVRRY 62
Query: 427 ALPXGCN 447
LP G N
Sbjct: 63 MLPKGHN 69
Score = 25.0 bits (52), Expect = 1.9
Identities = 9/18 (50%), Positives = 14/18 (77%)
Frame = +2
Query: 458 VESRLSSDGVLSVIAPRR 511
+ S LSSDG+L++ PR+
Sbjct: 73 IVSSLSSDGILTITCPRK 90
>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
Length = 3361
Score = 24.2 bits (50), Expect = 3.2
Identities = 17/80 (21%), Positives = 36/80 (45%)
Frame = -2
Query: 471 SRDSTDSAVTAXRQSVATSELTRYVTMLIFLLLVFAFNHDVAVRRFNRDFFRGEMLDVQV 292
S + TDS T + L + LI +++++ DVA+ ++ D +R + +
Sbjct: 740 SSNKTDSTETVYTLNDIKRYLVHAIENLIVVIVIYDKCKDVAILQYTSDRWRQQKYYDEF 799
Query: 291 YLELILITFECWTKVSSRGS 232
L+ + T + +S + S
Sbjct: 800 PLDGTITTGSAFVLLSDKTS 819
>AJ459961-1|CAD31060.1| 700|Anopheles gambiae prophenoloxidase 8
protein.
Length = 700
Score = 24.2 bits (50), Expect = 3.2
Identities = 17/54 (31%), Positives = 22/54 (40%)
Frame = -2
Query: 285 ELILITFECWTKVSSRGSKVTPRAVVFSAHKGAGCSTEKIFRSQPQAEMLIHEA 124
EL +TF W K S P H+ A K+F QP A+ L+ A
Sbjct: 80 ELPDLTFATWIKRRDSFSLFNPE------HRKAAGKLTKLFLDQPNADRLVDVA 127
>AF007166-1|AAB62929.1| 360|Anopheles gambiae serine protease 14D
protein.
Length = 360
Score = 23.0 bits (47), Expect = 7.5
Identities = 12/43 (27%), Positives = 18/43 (41%)
Frame = +1
Query: 73 KMSLIPWLFXYEIERPRRLMDQHFGLGLTPEDFLSAAAGPLVS 201
K+ PW E E+P H G + E ++ AA + S
Sbjct: 115 KIDEFPWTALIEYEKPNGRFGFHCGGSVINERYILTAAHCITS 157
>AY347946-1|AAR28374.1| 640|Anopheles gambiae putative NPY GPCR
protein.
Length = 640
Score = 22.6 bits (46), Expect = 9.9
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +3
Query: 144 RLGADSGRFSQCCSRPPCEQRILPPVASPCCRGSR 248
R+ +FSQ + CEQ+ LP V S C G++
Sbjct: 347 RMAKSKRKFSQ---QNCCEQQHLPHVHSEKCAGTQ 378
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 618,755
Number of Sequences: 2352
Number of extensions: 12876
Number of successful extensions: 17
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 57609459
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -