Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0679
         (588 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z82268-9|CAD89738.1|  509|Caenorhabditis elegans Hypothetical pr...    29   2.4  
Z82268-8|CAB05201.1| 1222|Caenorhabditis elegans Hypothetical pr...    29   2.4  
AL023835-17|CAD89760.1|  509|Caenorhabditis elegans Hypothetical...    29   2.4  
AL023835-16|CAA19496.1| 1222|Caenorhabditis elegans Hypothetical...    29   2.4  
Z81533-8|CAB04332.1|  917|Caenorhabditis elegans Hypothetical pr...    28   4.3  
AL132898-14|CAC14406.1| 1641|Caenorhabditis elegans Hypothetical...    28   4.3  
Z71264-3|CAA95827.1|  325|Caenorhabditis elegans Hypothetical pr...    28   5.7  
Z77662-14|CAI79239.1|  245|Caenorhabditis elegans Hypothetical p...    27   7.5  
AL132898-6|CAC14409.1|  187|Caenorhabditis elegans Hypothetical ...    27   7.5  
AL132898-5|CAC14408.1|  316|Caenorhabditis elegans Hypothetical ...    27   7.5  
AC084158-36|AAK68577.1| 1219|Caenorhabditis elegans Hypothetical...    27   7.5  
U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical p...    27   9.9  
AF025467-5|AAB71038.2| 1115|Caenorhabditis elegans Hypothetical ...    27   9.9  

>Z82268-9|CAD89738.1|  509|Caenorhabditis elegans Hypothetical
           protein Y37A1B.1b protein.
          Length = 509

 Score = 29.1 bits (62), Expect = 2.4
 Identities = 16/34 (47%), Positives = 19/34 (55%)
 Frame = -1

Query: 534 SGGVRSNNRPERRAXVARRCSDWWRRAGVARRYS 433
           +GG R N+ P  R+  ARR S   RRA   RR S
Sbjct: 208 NGGARGNDSPLHRSSAARRHSPPPRRASPPRRTS 241


>Z82268-8|CAB05201.1| 1222|Caenorhabditis elegans Hypothetical
           protein Y37A1B.1a protein.
          Length = 1222

 Score = 29.1 bits (62), Expect = 2.4
 Identities = 16/34 (47%), Positives = 19/34 (55%)
 Frame = -1

Query: 534 SGGVRSNNRPERRAXVARRCSDWWRRAGVARRYS 433
           +GG R N+ P  R+  ARR S   RRA   RR S
Sbjct: 208 NGGARGNDSPLHRSSAARRHSPPPRRASPPRRTS 241


>AL023835-17|CAD89760.1|  509|Caenorhabditis elegans Hypothetical
           protein Y37A1B.1b protein.
          Length = 509

 Score = 29.1 bits (62), Expect = 2.4
 Identities = 16/34 (47%), Positives = 19/34 (55%)
 Frame = -1

Query: 534 SGGVRSNNRPERRAXVARRCSDWWRRAGVARRYS 433
           +GG R N+ P  R+  ARR S   RRA   RR S
Sbjct: 208 NGGARGNDSPLHRSSAARRHSPPPRRASPPRRTS 241


>AL023835-16|CAA19496.1| 1222|Caenorhabditis elegans Hypothetical
           protein Y37A1B.1a protein.
          Length = 1222

 Score = 29.1 bits (62), Expect = 2.4
 Identities = 16/34 (47%), Positives = 19/34 (55%)
 Frame = -1

Query: 534 SGGVRSNNRPERRAXVARRCSDWWRRAGVARRYS 433
           +GG R N+ P  R+  ARR S   RRA   RR S
Sbjct: 208 NGGARGNDSPLHRSSAARRHSPPPRRASPPRRTS 241


>Z81533-8|CAB04332.1|  917|Caenorhabditis elegans Hypothetical protein
            F36G9.13 protein.
          Length = 917

 Score = 28.3 bits (60), Expect = 4.3
 Identities = 23/67 (34%), Positives = 30/67 (44%)
 Frame = +1

Query: 313  FECFRF*VYFDKSSLDRHSFKLARVRPPPADSVVLPAATDAVATRDASPPPPVATATRDX 492
            F  FRF    ++S+  +HS K+    PPP  +   PA T   A      P PV+ A  D 
Sbjct: 827  FFFFRFVARREQSA--QHSVKVPPPPPPPVPTAP-PAKTPETAP--LLVPKPVSNAENDA 881

Query: 493  GPPLRSV 513
              P  SV
Sbjct: 882  AKPTESV 888


>AL132898-14|CAC14406.1| 1641|Caenorhabditis elegans Hypothetical
           protein Y59A8B.1a protein.
          Length = 1641

 Score = 28.3 bits (60), Expect = 4.3
 Identities = 12/25 (48%), Positives = 14/25 (56%)
 Frame = +1

Query: 394 PPADSVVLPAATDAVATRDASPPPP 468
           PP    V+ A+  A A RD  PPPP
Sbjct: 182 PPPQPPVMTASAAAAAYRDRLPPPP 206



 Score = 27.1 bits (57), Expect = 9.9
 Identities = 14/47 (29%), Positives = 23/47 (48%), Gaps = 5/47 (10%)
 Frame = +1

Query: 391  PPPADS----VVLPAATDAVATRDASPPPP-VATATRDXGPPLRSVV 516
            PPP ++    +VLP     +  +  +PPPP  A  T    PP+  ++
Sbjct: 877  PPPPETTLTPIVLPRKKQRIEKKKLTPPPPQQAPVTSHTPPPVEQLM 923


>Z71264-3|CAA95827.1|  325|Caenorhabditis elegans Hypothetical
           protein K07G5.4 protein.
          Length = 325

 Score = 27.9 bits (59), Expect = 5.7
 Identities = 12/35 (34%), Positives = 20/35 (57%)
 Frame = +1

Query: 436 VATRDASPPPPVATATRDXGPPLRSVVXADAAAIY 540
           +++ +ASPPPP  + TR    P   +  + + AIY
Sbjct: 221 ISSSEASPPPPRPSITRTESVPRSILKNSSSFAIY 255


>Z77662-14|CAI79239.1|  245|Caenorhabditis elegans Hypothetical
           protein F47B8.13 protein.
          Length = 245

 Score = 27.5 bits (58), Expect = 7.5
 Identities = 13/30 (43%), Positives = 15/30 (50%)
 Frame = +1

Query: 391 PPPADSVVLPAATDAVATRDASPPPPVATA 480
           PPPAD+   PA   A A    + P P A A
Sbjct: 41  PPPADAAPAPAPEPAPAPAPEAVPAPAADA 70


>AL132898-6|CAC14409.1|  187|Caenorhabditis elegans Hypothetical
           protein Y59A8B.9 protein.
          Length = 187

 Score = 27.5 bits (58), Expect = 7.5
 Identities = 15/46 (32%), Positives = 20/46 (43%)
 Frame = +1

Query: 397 PADSVVLPAATDAVATRDASPPPPVATATRDXGPPLRSVVXADAAA 534
           PA     P  + + A   A+ P P A   +   PP+RS     AAA
Sbjct: 47  PAAPPTRPTPSRSSAAPRATAPTPTAAPPKTCAPPVRSASTVAAAA 92


>AL132898-5|CAC14408.1|  316|Caenorhabditis elegans Hypothetical
           protein Y59A8B.7 protein.
          Length = 316

 Score = 27.5 bits (58), Expect = 7.5
 Identities = 15/46 (32%), Positives = 20/46 (43%)
 Frame = +1

Query: 397 PADSVVLPAATDAVATRDASPPPPVATATRDXGPPLRSVVXADAAA 534
           PA     P  + + A   A+ P P A   +   PP+RS     AAA
Sbjct: 176 PAAPPTRPTPSRSSAAPRATAPTPTAAPPKTCAPPVRSASTVAAAA 221


>AC084158-36|AAK68577.1| 1219|Caenorhabditis elegans Hypothetical
           protein Y69A2AR.31 protein.
          Length = 1219

 Score = 27.5 bits (58), Expect = 7.5
 Identities = 12/35 (34%), Positives = 20/35 (57%)
 Frame = +1

Query: 40  IKLCDCRINVCRWLLHDTIVEMLSSGTCCVHECSQ 144
           I+ C+  ++ CRW L +  V   S+ +C   EC+Q
Sbjct: 499 IRRCES-VDECRWHLGELRVRCASTASCQREECAQ 532


>U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical
            protein T19D12.1 protein.
          Length = 1844

 Score = 27.1 bits (57), Expect = 9.9
 Identities = 12/32 (37%), Positives = 15/32 (46%)
 Frame = +1

Query: 391  PPPADSVVLPAATDAVATRDASPPPPVATATR 486
            PPP  S   P+ + AV T        +AT TR
Sbjct: 1204 PPPVPSTAAPSTSTAVPTTTVPVTTTIATTTR 1235


>AF025467-5|AAB71038.2| 1115|Caenorhabditis elegans Hypothetical
           protein R148.3a protein.
          Length = 1115

 Score = 27.1 bits (57), Expect = 9.9
 Identities = 16/50 (32%), Positives = 20/50 (40%), Gaps = 1/50 (2%)
 Frame = +1

Query: 391 PPPA-DSVVLPAATDAVATRDASPPPPVATATRDXGPPLRSVVXADAAAI 537
           P PA D VV PA  +       +PPPP      +   P  +   A  A I
Sbjct: 357 PAPAEDPVVTPAPEELTTPPPPAPPPPAPAVPEEAQAPTPAPEEAPEAQI 406


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,804,538
Number of Sequences: 27780
Number of extensions: 227167
Number of successful extensions: 867
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 759
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 847
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1237082886
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)