Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0678
         (637 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    23   1.6  
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    21   8.6  
AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory recept...    21   8.6  

>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = +1

Query: 34  VAKFFKTIKQY*LSYLRTNIRFNVCL 111
           V  FFK    Y  +Y+  NI F +CL
Sbjct: 179 VEHFFKKQFHYIFTYMPYNIVFGLCL 204


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 7/17 (41%), Positives = 13/17 (76%)
 Frame = +2

Query: 359 VLVTGLFMLENMTKPLL 409
           +L   LF+L+N+ KP++
Sbjct: 115 LLKHNLFLLDNIVKPII 131


>AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory receptor
           candidate 18 protein.
          Length = 387

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 7/19 (36%), Positives = 14/19 (73%)
 Frame = -3

Query: 284 VVFALSSDAFSFLGLLIYF 228
           ++FA+   AFS+L +++ F
Sbjct: 353 LLFAICGSAFSYLFIMLQF 371


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 145,740
Number of Sequences: 336
Number of extensions: 3174
Number of successful extensions: 8
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16397237
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)