Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0678
(637 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_05_0688 + 26762668-26762893,26763027-26763101,26763865-267640... 35 0.062
12_02_1034 - 25562214-25562280,25562661-25562794,25562990-255631... 34 0.11
05_02_0116 + 6773659-6774437,6775103-6775298,6775381-6775565,677... 33 0.14
10_08_0435 + 17905728-17905901,17906608-17906931,17907205-179073... 33 0.25
09_01_0180 + 2632507-2634870 32 0.44
01_01_0829 + 6471032-6471870,6472490-6472685,6472772-6472956,647... 32 0.44
03_02_0098 + 5608787-5610812,5610956-5611053 31 0.58
02_05_0780 - 31705605-31705754,31705858-31706191,31706306-317064... 31 0.58
02_03_0291 - 17345049-17345088,17345137-17345169,17345332-173454... 31 0.58
05_07_0294 - 29038259-29038420,29038526-29038632,29038889-290390... 31 1.0
01_01_1190 + 9463973-9465732,9466210-9466440,9467664-9467793,946... 30 1.3
01_01_0499 - 3675303-3675484,3676888-3676982,3677046-3677096,367... 30 1.3
03_05_0859 - 28329837-28329919,28330062-28330131,28330498-283305... 30 1.8
12_02_1238 - 27246769-27246948,27247030-27247104,27247848-272479... 29 3.1
03_05_0690 + 26778567-26778804,26778950-26779024,26779995-267800... 29 3.1
03_03_0065 + 14192725-14192813,14193004-14193088,14193971-141940... 29 4.1
02_01_0395 + 2869748-2870045,2870450-2870571,2871700-2871777,287... 28 7.1
06_03_0499 + 21461608-21463427,21463517-21463627,21463867-214641... 27 9.4
06_01_0474 - 3362734-3362827,3363179-3363366,3363458-3363700,336... 27 9.4
05_01_0460 - 3644229-3644420,3644623-3644865,3644959-3645237,364... 27 9.4
05_01_0227 - 1684597-1684727,1685003-1685100,1685176-1685270,168... 27 9.4
02_04_0205 + 20897376-20897597,20898623-20898774,20899874-209000... 27 9.4
>03_05_0688 +
26762668-26762893,26763027-26763101,26763865-26764032,
26764983-26765114,26765538-26765677,26765840-26765908,
26766325-26766435,26766854-26766973,26768223-26768324,
26769608-26769778,26769865-26769944,26770119-26770182
Length = 485
Score = 34.7 bits (76), Expect = 0.062
Identities = 22/50 (44%), Positives = 27/50 (54%), Gaps = 4/50 (8%)
Frame = +1
Query: 301 EENTTKVSE----SAIERAMKLKGAGNRAFHAGEYDKAIALYNEALKHAP 438
E T K+SE S +R KLK G +AF G+Y AI Y EA+K P
Sbjct: 338 EITTVKLSEHDKGSDGDRKSKLKLHGGKAFEEGDYAGAIIFYTEAMKLDP 387
>12_02_1034 -
25562214-25562280,25562661-25562794,25562990-25563109,
25563331-25563510,25563847-25564020,25564466-25564639,
25564734-25564827,25566088-25566242
Length = 365
Score = 33.9 bits (74), Expect = 0.11
Identities = 16/29 (55%), Positives = 18/29 (62%)
Frame = +1
Query: 352 LKGAGNRAFHAGEYDKAIALYNEALKHAP 438
LK GN F AG Y KA ALY +A+K P
Sbjct: 17 LKDQGNEQFKAGNYLKAAALYTQAIKLDP 45
>05_02_0116 +
6773659-6774437,6775103-6775298,6775381-6775565,
6775746-6776079,6776174-6776378,6776692-6776834,
6777081-6777233
Length = 664
Score = 33.5 bits (73), Expect = 0.14
Identities = 13/49 (26%), Positives = 23/49 (46%)
Frame = +1
Query: 292 LDNEENTTKVSESAIERAMKLKGAGNRAFHAGEYDKAIALYNEALKHAP 438
+D+ ++ + + GN FH+G++ +A Y E LKH P
Sbjct: 401 IDSGNVEVMAMHKSVRTVAQARTLGNELFHSGKFAEAFLAYGEGLKHHP 449
Score = 31.9 bits (69), Expect = 0.44
Identities = 14/52 (26%), Positives = 30/52 (57%)
Frame = +1
Query: 289 SLDNEENTTKVSESAIERAMKLKGAGNRAFHAGEYDKAIALYNEALKHAPQT 444
S ++ + ++S +A A +++ AGN + G +++A+ LY+ AL P +
Sbjct: 162 SSEDHASAVRMSAAASAEAEEVRRAGNEQYKNGCFEEALRLYDRALALCPDS 213
>10_08_0435 +
17905728-17905901,17906608-17906931,17907205-17907321,
17908418-17908597,17909064-17909190,17909327-17909440,
17909794-17909909
Length = 383
Score = 32.7 bits (71), Expect = 0.25
Identities = 15/40 (37%), Positives = 24/40 (60%)
Frame = +1
Query: 322 SESAIERAMKLKGAGNRAFHAGEYDKAIALYNEALKHAPQ 441
+ A +A K GN+ F AGEY++A++ Y AL+ A +
Sbjct: 204 TSKARSQANDAKAEGNKFFGAGEYERALSQYETALQIAAE 243
>09_01_0180 + 2632507-2634870
Length = 787
Score = 31.9 bits (69), Expect = 0.44
Identities = 15/36 (41%), Positives = 22/36 (61%)
Frame = +1
Query: 334 IERAMKLKGAGNRAFHAGEYDKAIALYNEALKHAPQ 441
+ RA +LK GNR F + +Y A+ Y AL+ AP+
Sbjct: 56 LRRAHELKEEGNRLFQSRDYGGALRQYELALRLAPR 91
>01_01_0829 +
6471032-6471870,6472490-6472685,6472772-6472956,
6473206-6473539,6473629-6473833,6474927-6475033,
6475117-6475269
Length = 672
Score = 31.9 bits (69), Expect = 0.44
Identities = 11/35 (31%), Positives = 20/35 (57%)
Frame = +1
Query: 334 IERAMKLKGAGNRAFHAGEYDKAIALYNEALKHAP 438
++ + + GN F++G++ +A Y E LKH P
Sbjct: 435 VKAVARARSLGNELFNSGKFSEACLAYGEGLKHHP 469
Score = 29.1 bits (62), Expect = 3.1
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +1
Query: 349 KLKGAGNRAFHAGEYDKAIALYNEALKHAP 438
+LK AGN + G +++A+ LY+ AL P
Sbjct: 202 ELKKAGNEQYKKGYFEEALRLYDRALALCP 231
>03_02_0098 + 5608787-5610812,5610956-5611053
Length = 707
Score = 31.5 bits (68), Expect = 0.58
Identities = 16/32 (50%), Positives = 19/32 (59%)
Frame = +1
Query: 343 AMKLKGAGNRAFHAGEYDKAIALYNEALKHAP 438
A + K GN F GE +KAI LY EAL+ P
Sbjct: 468 AKEKKRQGNDMFWHGEVEKAIELYTEALELCP 499
>02_05_0780 -
31705605-31705754,31705858-31706191,31706306-31706478,
31706615-31706810,31707864-31708777
Length = 588
Score = 31.5 bits (68), Expect = 0.58
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +1
Query: 349 KLKGAGNRAFHAGEYDKAIALYNEALKHAP 438
KLK GN + G Y +A+ALY++A+ P
Sbjct: 227 KLKEMGNEEYREGHYAEAVALYDQAIMVDP 256
>02_03_0291 -
17345049-17345088,17345137-17345169,17345332-17345411,
17345512-17345682,17347181-17347282,17348812-17348955,
17350228-17350350,17351929-17352006,17352224-17352363,
17353480-17353611,17354092-17354262,17354431-17354496,
17354575-17354596
Length = 433
Score = 31.5 bits (68), Expect = 0.58
Identities = 15/34 (44%), Positives = 20/34 (58%)
Frame = +1
Query: 340 RAMKLKGAGNRAFHAGEYDKAIALYNEALKHAPQ 441
R LK GNRA+ +Y A LYN A++H P+
Sbjct: 300 RPADLKLEGNRAYMRKDYLTAAKLYNMAIEHDPE 333
>05_07_0294 -
29038259-29038420,29038526-29038632,29038889-29039093,
29039173-29039536,29039588-29039772,29039879-29040080,
29040697-29041589
Length = 705
Score = 30.7 bits (66), Expect = 1.0
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +1
Query: 334 IERAMKLKGAGNRAFHAGEYDKAIALYNEALKHAP 438
I + +G GN F AG++ +A Y E LK+ P
Sbjct: 465 IRLVAQARGQGNELFKAGKFAEASLAYGEGLKYEP 499
>01_01_1190 +
9463973-9465732,9466210-9466440,9467664-9467793,
9468723-9468888,9469528-9469859,9470284-9470513,
9471535-9471613,9471689-9471865
Length = 1034
Score = 30.3 bits (65), Expect = 1.3
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = +1
Query: 355 KGAGNRAFHAGEYDKAIALYNEAL 426
+ AGN+AF AG+Y +A+ Y AL
Sbjct: 804 QAAGNKAFQAGKYSEAVEHYTAAL 827
>01_01_0499 -
3675303-3675484,3676888-3676982,3677046-3677096,
3677191-3677270,3677423-3677593,3677836-3677937,
3678092-3678244,3678392-3678523,3678702-3678788,
3678987-3679126,3679246-3679660
Length = 535
Score = 30.3 bits (65), Expect = 1.3
Identities = 14/34 (41%), Positives = 23/34 (67%)
Frame = +1
Query: 328 SAIERAMKLKGAGNRAFHAGEYDKAIALYNEALK 429
++ +R +LK GN +F+ +YD AI LY+ A+K
Sbjct: 313 ASCKRKDELKLQGNSSFNNEDYDAAILLYSMAMK 346
>03_05_0859 -
28329837-28329919,28330062-28330131,28330498-28330549,
28330671-28330798,28331283-28331483,28332183-28332317,
28333116-28333275,28333824-28334019,28334070-28334252,
28334382-28334507,28335090-28335214,28335389-28335541,
28337267-28337472
Length = 605
Score = 29.9 bits (64), Expect = 1.8
Identities = 18/48 (37%), Positives = 25/48 (52%)
Frame = +1
Query: 286 ISLDNEENTTKVSESAIERAMKLKGAGNRAFHAGEYDKAIALYNEALK 429
++ N + +SE A E A K GN AF ++ KAI Y EA+K
Sbjct: 473 LAKSNVSSKQAMSEEAAEAA---KEKGNIAFKEKQWQKAINFYTEAIK 517
>12_02_1238 -
27246769-27246948,27247030-27247104,27247848-27247959,
27248213-27248295,27248544-27248791,27249448-27249533,
27250131-27250210,27250310-27250480,27250998-27251099,
27251591-27251743,27252459-27252575,27252715-27252804,
27253057-27253196,27253339-27253396,27253931-27254010,
27254215-27254349,27254482-27254646,27254982-27255021
Length = 704
Score = 29.1 bits (62), Expect = 3.1
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +1
Query: 352 LKGAGNRAFHAGEYDKAIALYNEALKHAPQTVLSIL 459
LK GN AF +Y+KA Y +AL+ P ++L
Sbjct: 338 LKQKGNEAFDEQDYEKASVWYTQALEVDPCDATTLL 373
>03_05_0690 +
26778567-26778804,26778950-26779024,26779995-26780099,
26780869-26781000,26781432-26781571,26782213-26782323,
26782690-26782812,26784166-26784267,26784536-26784546,
26784878-26785103,26785363-26785401,26785413-26785583,
26785674-26785753,26785976-26786039
Length = 538
Score = 29.1 bits (62), Expect = 3.1
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = +1
Query: 337 ERAMKLKGAGNRAFHAGEYDKAIALYNEAL 426
+R KLK G +AF G+Y AI Y E L
Sbjct: 315 DRKSKLKLHGGKAFEEGDYAGAIIFYTEFL 344
>03_03_0065 +
14192725-14192813,14193004-14193088,14193971-14194040,
14194730-14194827,14194931-14195101,14196192-14196224,
14196762-14196820,14197143-14197190,14197399-14197480,
14198317-14198475,14199036-14199093,14199801-14199949,
14200403-14200503,14200574-14200643,14201088-14201147,
14201883-14201939,14202247-14202315,14202485-14202562,
14202996-14203097,14203203-14203274,14203361-14203648
Length = 665
Score = 28.7 bits (61), Expect = 4.1
Identities = 12/35 (34%), Positives = 21/35 (60%)
Frame = +1
Query: 325 ESAIERAMKLKGAGNRAFHAGEYDKAIALYNEALK 429
+ ++ A K+K GNR F G+++ A A Y + L+
Sbjct: 432 QEIMDDAEKIKTTGNRLFKEGKFELAKAKYEKVLR 466
>02_01_0395 +
2869748-2870045,2870450-2870571,2871700-2871777,
2871886-2872470,2872917-2873657,2873794-2873868
Length = 632
Score = 27.9 bits (59), Expect = 7.1
Identities = 17/44 (38%), Positives = 23/44 (52%)
Frame = +2
Query: 143 TGSTPFPKWQLAILLGAPIAIGLGYLYLRNRLEDPEKRKHQNLK 274
+G+ P P WQL + IA GL YL+ PE H++LK
Sbjct: 404 SGTPPLP-WQLRFKMAVEIATGLLYLHKMK----PEAFVHRDLK 442
>06_03_0499 +
21461608-21463427,21463517-21463627,21463867-21464143,
21464265-21464353,21464508-21464595,21464698-21464907,
21464985-21465110,21465429-21465620,21466532-21467188
Length = 1189
Score = 27.5 bits (58), Expect = 9.4
Identities = 18/35 (51%), Positives = 21/35 (60%)
Frame = +1
Query: 259 ASELKAKTTISLDNEENTTKVSESAIERAMKLKGA 363
A LKAKT+I D E +VSE IER + L GA
Sbjct: 693 AEFLKAKTSIGPDRELQLERVSE-LIERDLILVGA 726
>06_01_0474 -
3362734-3362827,3363179-3363366,3363458-3363700,
3363820-3364098,3364189-3364386,3364475-3365110,
3365209-3365463,3365579-3365685,3365770-3369566,
3369677-3370166,3370918-3371308,3371481-3371573,
3371687-3371810,3372544-3372791
Length = 2380
Score = 27.5 bits (58), Expect = 9.4
Identities = 12/33 (36%), Positives = 16/33 (48%)
Frame = +3
Query: 426 EACPPDRPVDLATFYQNRSACYEKREMWNKLKK 524
E CPP PV + YQ CY E+ ++ K
Sbjct: 447 EHCPPAYPVKVRVSYQKLLKCYVLNELHHRPPK 479
>05_01_0460 -
3644229-3644420,3644623-3644865,3644959-3645237,
3645328-3645525,3645614-3646249,3646352-3646606,
3646718-3646824,3646909-3650705,3650816-3651305,
3652043-3652433,3652621-3652713,3652818-3652941,
3653871-3654118
Length = 2350
Score = 27.5 bits (58), Expect = 9.4
Identities = 12/33 (36%), Positives = 16/33 (48%)
Frame = +3
Query: 426 EACPPDRPVDLATFYQNRSACYEKREMWNKLKK 524
E CPP PV + YQ CY E+ ++ K
Sbjct: 447 EHCPPAYPVKVRVSYQKLLKCYVLNELHHRPPK 479
>05_01_0227 -
1684597-1684727,1685003-1685100,1685176-1685270,
1685360-1685545,1686185-1686298,1686583-1686684,
1686811-1687096,1687242-1687291,1687351-1687479,
1687590-1687724,1688163-1688165
Length = 442
Score = 27.5 bits (58), Expect = 9.4
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = +2
Query: 509 EQVKEDCTFALKLNEKYVK 565
E+ + DCT AL L+++YVK
Sbjct: 108 EEAENDCTEALNLDDRYVK 126
>02_04_0205 +
20897376-20897597,20898623-20898774,20899874-20900084,
20900734-20900872,20901310-20901341,20901471-20901557,
20901720-20901932,20903687-20903869,20903979-20904084,
20905042-20905064,20905511-20905570
Length = 475
Score = 27.5 bits (58), Expect = 9.4
Identities = 16/51 (31%), Positives = 25/51 (49%)
Frame = +1
Query: 337 ERAMKLKGAGNRAFHAGEYDKAIALYNEALKHAPQTVLSILLHFTKTALLV 489
+ A LK GNR G+Y +A+ + AL P + +LH K +L+
Sbjct: 181 DNAESLKHQGNRLAEEGKYHEALGKWEAALTLMPN---NAILHEQKAQILL 228
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,087,068
Number of Sequences: 37544
Number of extensions: 328689
Number of successful extensions: 874
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 840
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 874
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1561213104
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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