Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0678
(637 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein. 22 4.3
DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex det... 22 4.3
DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex det... 22 4.3
DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex det... 22 4.3
DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex det... 22 4.3
AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex det... 22 4.3
AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex det... 22 4.3
AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex det... 22 4.3
AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex det... 22 4.3
AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex det... 22 4.3
AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex det... 22 4.3
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 22 4.3
AB050744-1|BAB17753.1| 238|Apis mellifera period protein protein. 22 4.3
DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex det... 21 7.6
DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex det... 21 7.6
DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex det... 21 7.6
DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex det... 21 7.6
DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex det... 21 7.6
DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex det... 21 7.6
DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex det... 21 7.6
DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex det... 21 7.6
DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex det... 21 7.6
DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex det... 21 7.6
AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine rece... 21 7.6
AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 21 7.6
AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex det... 21 7.6
AF498306-5|AAM19330.1| 456|Apis mellifera dopamine receptor typ... 21 7.6
>EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein.
Length = 570
Score = 22.2 bits (45), Expect = 4.3
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = +2
Query: 281 RQYLWIMKKTLLRYPKVP*NAP*N 352
R+YL ++K RY P NAP N
Sbjct: 447 RRYLPVLKNFPTRYIHEPWNAPLN 470
>DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 22.2 bits (45), Expect = 4.3
Identities = 8/21 (38%), Positives = 14/21 (66%)
Frame = -1
Query: 622 LQEQAQIATFSAARDRRRKLY 560
L+E+ +S +R+R +KLY
Sbjct: 30 LEERTSCKRYSRSREREQKLY 50
>DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 22.2 bits (45), Expect = 4.3
Identities = 8/21 (38%), Positives = 14/21 (66%)
Frame = -1
Query: 622 LQEQAQIATFSAARDRRRKLY 560
L+E+ +S +R+R +KLY
Sbjct: 30 LEERTSCKRYSRSREREQKLY 50
>DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 22.2 bits (45), Expect = 4.3
Identities = 8/21 (38%), Positives = 14/21 (66%)
Frame = -1
Query: 622 LQEQAQIATFSAARDRRRKLY 560
L+E+ +S +R+R +KLY
Sbjct: 30 LEERTSCKRYSRSREREQKLY 50
>DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 22.2 bits (45), Expect = 4.3
Identities = 8/21 (38%), Positives = 14/21 (66%)
Frame = -1
Query: 622 LQEQAQIATFSAARDRRRKLY 560
L+E+ +S +R+R +KLY
Sbjct: 30 LEERTSCKRYSRSREREQKLY 50
>AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 22.2 bits (45), Expect = 4.3
Identities = 8/21 (38%), Positives = 14/21 (66%)
Frame = -1
Query: 622 LQEQAQIATFSAARDRRRKLY 560
L+E+ +S +R+R +KLY
Sbjct: 263 LEERTSCKRYSRSREREQKLY 283
>AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 22.2 bits (45), Expect = 4.3
Identities = 8/21 (38%), Positives = 14/21 (66%)
Frame = -1
Query: 622 LQEQAQIATFSAARDRRRKLY 560
L+E+ +S +R+R +KLY
Sbjct: 263 LEERTSCKRYSRSREREQKLY 283
>AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 22.2 bits (45), Expect = 4.3
Identities = 8/21 (38%), Positives = 14/21 (66%)
Frame = -1
Query: 622 LQEQAQIATFSAARDRRRKLY 560
L+E+ +S +R+R +KLY
Sbjct: 263 LEERTSCKRYSRSREREQKLY 283
>AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 22.2 bits (45), Expect = 4.3
Identities = 8/21 (38%), Positives = 14/21 (66%)
Frame = -1
Query: 622 LQEQAQIATFSAARDRRRKLY 560
L+E+ +S +R+R +KLY
Sbjct: 263 LEERTSCKRYSRSREREQKLY 283
>AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 22.2 bits (45), Expect = 4.3
Identities = 8/21 (38%), Positives = 14/21 (66%)
Frame = -1
Query: 622 LQEQAQIATFSAARDRRRKLY 560
L+E+ +S +R+R +KLY
Sbjct: 263 LEERTSCKRYSRSREREQKLY 283
>AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 22.2 bits (45), Expect = 4.3
Identities = 8/21 (38%), Positives = 14/21 (66%)
Frame = -1
Query: 622 LQEQAQIATFSAARDRRRKLY 560
L+E+ +S +R+R +KLY
Sbjct: 252 LEERTSCKRYSRSREREQKLY 272
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 22.2 bits (45), Expect = 4.3
Identities = 8/22 (36%), Positives = 14/22 (63%)
Frame = +3
Query: 57 KTILTKLFTNKHSI*CLLKPSD 122
+TI++ +FT +H+ C L D
Sbjct: 303 ETIISSVFTTRHNATCYLSHVD 324
>AB050744-1|BAB17753.1| 238|Apis mellifera period protein protein.
Length = 238
Score = 22.2 bits (45), Expect = 4.3
Identities = 8/22 (36%), Positives = 14/22 (63%)
Frame = +3
Query: 57 KTILTKLFTNKHSI*CLLKPSD 122
+TI++ +FT +H+ C L D
Sbjct: 9 ETIISSVFTTRHNATCYLSHVD 30
>DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 7.6
Identities = 8/21 (38%), Positives = 14/21 (66%)
Frame = -1
Query: 622 LQEQAQIATFSAARDRRRKLY 560
L+E+ +S +R+R +KLY
Sbjct: 30 LEERTSRKRYSRSREREQKLY 50
>DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.4 bits (43), Expect = 7.6
Identities = 8/21 (38%), Positives = 14/21 (66%)
Frame = -1
Query: 622 LQEQAQIATFSAARDRRRKLY 560
L+E+ +S +R+R +KLY
Sbjct: 30 LEERTSRKRYSRSREREQKLY 50
>DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 7.6
Identities = 8/21 (38%), Positives = 14/21 (66%)
Frame = -1
Query: 622 LQEQAQIATFSAARDRRRKLY 560
L+E+ +S +R+R +KLY
Sbjct: 30 LEERTSRKRYSRSREREQKLY 50
>DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 7.6
Identities = 8/21 (38%), Positives = 14/21 (66%)
Frame = -1
Query: 622 LQEQAQIATFSAARDRRRKLY 560
L+E+ +S +R+R +KLY
Sbjct: 30 LEERTSRKRYSRSREREQKLY 50
>DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 7.6
Identities = 8/21 (38%), Positives = 14/21 (66%)
Frame = -1
Query: 622 LQEQAQIATFSAARDRRRKLY 560
L+E+ +S +R+R +KLY
Sbjct: 30 LEERTSRKRYSRSREREQKLY 50
>DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 7.6
Identities = 8/21 (38%), Positives = 14/21 (66%)
Frame = -1
Query: 622 LQEQAQIATFSAARDRRRKLY 560
L+E+ +S +R+R +KLY
Sbjct: 30 LEERTSRKRYSRSREREQKLY 50
>DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 7.6
Identities = 8/21 (38%), Positives = 14/21 (66%)
Frame = -1
Query: 622 LQEQAQIATFSAARDRRRKLY 560
L+E+ +S +R+R +KLY
Sbjct: 30 LEERTSRKRYSRSREREQKLY 50
>DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 7.6
Identities = 8/21 (38%), Positives = 14/21 (66%)
Frame = -1
Query: 622 LQEQAQIATFSAARDRRRKLY 560
L+E+ +S +R+R +KLY
Sbjct: 30 LEERTSRKRYSRSREREQKLY 50
>DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 7.6
Identities = 8/21 (38%), Positives = 14/21 (66%)
Frame = -1
Query: 622 LQEQAQIATFSAARDRRRKLY 560
L+E+ +S +R+R +KLY
Sbjct: 30 LEERTSRKRYSRSREREQKLY 50
>DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 7.6
Identities = 8/21 (38%), Positives = 14/21 (66%)
Frame = -1
Query: 622 LQEQAQIATFSAARDRRRKLY 560
L+E+ +S +R+R +KLY
Sbjct: 30 LEERTSRKRYSRSREREQKLY 50
>AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine
receptor protein.
Length = 694
Score = 21.4 bits (43), Expect = 7.6
Identities = 6/15 (40%), Positives = 11/15 (73%)
Frame = +2
Query: 167 WQLAILLGAPIAIGL 211
W ++ +G+PI +GL
Sbjct: 311 WAISAAIGSPIVLGL 325
>AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 21.4 bits (43), Expect = 7.6
Identities = 8/21 (38%), Positives = 14/21 (66%)
Frame = -1
Query: 622 LQEQAQIATFSAARDRRRKLY 560
L+E+ +S +R+R +KLY
Sbjct: 263 LEERTSRKRYSRSREREQKLY 283
>AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 21.4 bits (43), Expect = 7.6
Identities = 8/21 (38%), Positives = 14/21 (66%)
Frame = -1
Query: 622 LQEQAQIATFSAARDRRRKLY 560
L+E+ +S +R+R +KLY
Sbjct: 263 LEERTSRKRYSRSREREQKLY 283
>AF498306-5|AAM19330.1| 456|Apis mellifera dopamine receptor type
D2 protein.
Length = 456
Score = 21.4 bits (43), Expect = 7.6
Identities = 9/27 (33%), Positives = 15/27 (55%)
Frame = -1
Query: 598 TFSAARDRRRKLYILFVKF*CKSAIFF 518
T+ + RRR ++ + + C SAI F
Sbjct: 153 TYPSKMSRRRAAVLIAIVWICSSAISF 179
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 168,283
Number of Sequences: 438
Number of extensions: 3698
Number of successful extensions: 29
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19071468
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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