Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0678
(637 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g20360.1 68418.m02422 octicosapeptide/Phox/Bem1p (PB1) domain... 36 0.030
At1g33400.1 68414.m04135 tetratricopeptide repeat (TPR)-containi... 35 0.039
At4g32070.1 68417.m04564 octicosapeptide/Phox/Bem1p (PB1) domain... 32 0.28
At1g04190.1 68414.m00409 tetratricopeptide repeat (TPR)-containi... 32 0.28
At3g17970.1 68416.m02286 chloroplast outer membrane translocon s... 31 0.64
At3g58620.1 68416.m06533 tetratricopeptide repeat (TPR)-containi... 31 0.85
At5g65160.1 68418.m08195 tetratricopeptide repeat (TPR)-containi... 30 1.1
At4g12400.1 68417.m01960 stress-inducible protein, putative simi... 29 2.0
At1g56090.1 68414.m06441 tetratricopeptide repeat (TPR)-containi... 29 2.6
At1g16760.1 68414.m02013 protein kinase family protein contains ... 29 3.4
At1g78940.1 68414.m09203 protein kinase family protein contains ... 28 4.5
At5g09420.1 68418.m01091 chloroplast outer membrane translocon s... 28 6.0
At5g50830.1 68418.m06297 expressed protein 27 7.9
At3g45060.1 68416.m04857 high-affinity nitrate transporter, puta... 27 7.9
At3g19160.1 68416.m02433 adenylate isopentenyltransferase 8 / ad... 27 7.9
At1g80070.1 68414.m09373 splicing factor, putative strong simila... 27 7.9
>At5g20360.1 68418.m02422 octicosapeptide/Phox/Bem1p (PB1)
domain-containing protein / tetratricopeptide repeat
(TPR)-containing protein contains Pfam profiles PF00564:
PB1 domain, PF00515: TPR Domain
Length = 809
Score = 35.5 bits (78), Expect = 0.030
Identities = 22/83 (26%), Positives = 39/83 (46%)
Frame = +1
Query: 289 SLDNEENTTKVSESAIERAMKLKGAGNRAFHAGEYDKAIALYNEALKHAPQTVLSILLHF 468
+LD+ + + + + +A LK GN+ F +YD A+ Y EA+K P+ + +
Sbjct: 108 TLDDCVSEVETLDDCVSKAQGLKEEGNKLFQKRDYDGAMFKYGEAIKILPKDHVEVSHVR 167
Query: 469 TKTALLVMKNEKCGTS*RRLHFC 537
A M+ E G + +H C
Sbjct: 168 ANVASCYMQLEP-GEFAKAIHEC 189
>At1g33400.1 68414.m04135 tetratricopeptide repeat (TPR)-containing
protein contains Pfam profile PF00515 TPR Domain
Length = 798
Score = 35.1 bits (77), Expect = 0.039
Identities = 14/34 (41%), Positives = 24/34 (70%)
Frame = +1
Query: 337 ERAMKLKGAGNRAFHAGEYDKAIALYNEALKHAP 438
E ++ LK GN F + ++D+A+ LY++AL+ AP
Sbjct: 61 ETSLDLKRRGNHCFRSRDFDEALRLYSKALRVAP 94
>At4g32070.1 68417.m04564 octicosapeptide/Phox/Bem1p (PB1)
domain-containing protein / tetratricopeptide repeat
(TPR)-containing protein similar to SP|Q99614
Tetratricopeptide repeat protein 1 {Homo sapiens};
contains Pfam profiles PF00564: PB1 domain, PF00515: TPR
Domain
Length = 811
Score = 32.3 bits (70), Expect = 0.28
Identities = 17/57 (29%), Positives = 31/57 (54%)
Frame = +1
Query: 325 ESAIERAMKLKGAGNRAFHAGEYDKAIALYNEALKHAPQTVLSILLHFTKTALLVMK 495
E I RA++LK GN+ F +++ A+ +++ALK P+ + + T A M+
Sbjct: 45 EIFISRALELKEEGNKLFQKRDHEGAMLSFDKALKLLPKDHIDVAYLRTSMASCYMQ 101
>At1g04190.1 68414.m00409 tetratricopeptide repeat (TPR)-containing
protein low similarity to protein antigen LmSTI1
[Leishmania major] GI:1698880; contains Pfam profile
PF00515 TPR Domain; EST gb|Z47802 and gb|Z48402 come
from this gene
Length = 328
Score = 32.3 bits (70), Expect = 0.28
Identities = 16/34 (47%), Positives = 19/34 (55%)
Frame = +1
Query: 337 ERAMKLKGAGNRAFHAGEYDKAIALYNEALKHAP 438
E LK GN F AG + KA ALY +A+K P
Sbjct: 13 EAEKSLKEKGNEFFKAGNFLKAAALYTQAIKLDP 46
>At3g17970.1 68416.m02286 chloroplast outer membrane translocon
subunit, putative similar to Toc64 [Pisum sativum]
GI:7453538; contains Pfam profile PF00515 TPR Domain
Length = 589
Score = 31.1 bits (67), Expect = 0.64
Identities = 17/47 (36%), Positives = 27/47 (57%)
Frame = +1
Query: 289 SLDNEENTTKVSESAIERAMKLKGAGNRAFHAGEYDKAIALYNEALK 429
S+ + ++K + + E A K GN+AF + KAI LY+EA+K
Sbjct: 456 SIVTDPKSSKKAITKEESAEIAKEKGNQAFKEKLWQKAIGLYSEAIK 502
>At3g58620.1 68416.m06533 tetratricopeptide repeat (TPR)-containing
protein contains Pfam profile PF00515 TPR Domain
Length = 682
Score = 30.7 bits (66), Expect = 0.85
Identities = 12/31 (38%), Positives = 21/31 (67%)
Frame = +1
Query: 349 KLKGAGNRAFHAGEYDKAIALYNEALKHAPQ 441
++K AGN + G Y +A+ALY+ A+ +P+
Sbjct: 213 EVKKAGNVMYRKGNYAEALALYDRAISLSPE 243
Score = 29.9 bits (64), Expect = 1.5
Identities = 14/55 (25%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = +1
Query: 268 LKAKTTISLDNEENTTKVSE-SAIERAMKLKGAGNRAFHAGEYDKAIALYNEALK 429
+K + +++D+ + VS + ++ K + GN F +G Y +A Y + LK
Sbjct: 423 VKVERAMTIDHSNSPEVVSVLNNVKNVAKARTRGNELFSSGRYSEASVAYGDGLK 477
>At5g65160.1 68418.m08195 tetratricopeptide repeat (TPR)-containing
protein contains Pfam profile PF00515 TPR Domain
Length = 593
Score = 30.3 bits (65), Expect = 1.1
Identities = 17/55 (30%), Positives = 26/55 (47%)
Frame = +1
Query: 298 NEENTTKVSESAIERAMKLKGAGNRAFHAGEYDKAIALYNEALKHAPQTVLSILL 462
N +S A + + + GN F +G + +A A Y E L H P+ S+LL
Sbjct: 456 NNREVIMISRRA-QAVTEARFKGNELFKSGRFQEACAAYGEGLDHDPRN--SVLL 507
>At4g12400.1 68417.m01960 stress-inducible protein, putative similar
to sti (stress inducible protein) [Glycine max]
GI:872116; contains Pfam profile PF00515 TPR Domain
Length = 530
Score = 29.5 bits (63), Expect = 2.0
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = +1
Query: 376 FHAGEYDKAIALYNEALKHAPQ 441
F EYDKA+ Y E LKH P+
Sbjct: 448 FFMKEYDKAMETYQEGLKHDPK 469
>At1g56090.1 68414.m06441 tetratricopeptide repeat (TPR)-containing
protein contains Pfam profile PF00515 TPR Domain;
similar to infertility-related sperm protein [Homo
sapiens] GI:10863768, TPR-containing protein involved in
spermatogenesis TPIS [Mus musculus] GI:6272680
Length = 272
Score = 29.1 bits (62), Expect = 2.6
Identities = 16/51 (31%), Positives = 27/51 (52%)
Frame = +1
Query: 328 SAIERAMKLKGAGNRAFHAGEYDKAIALYNEALKHAPQTVLSILLHFTKTA 480
SA+ + K++ G++ + G+Y +A+ Y EAL A I LH + A
Sbjct: 3 SAVTASGKVE-KGHQLYRDGKYKEALLFYTEALTAAKAKPQKIALHSNRAA 52
>At1g16760.1 68414.m02013 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 758
Score = 28.7 bits (61), Expect = 3.4
Identities = 17/43 (39%), Positives = 23/43 (53%)
Frame = +2
Query: 146 GSTPFPKWQLAILLGAPIAIGLGYLYLRNRLEDPEKRKHQNLK 274
G+TP WQL + A IA GL +L+ PE H++LK
Sbjct: 536 GNTPPISWQLRFRIAAEIATGLLFLHQTK----PEPIVHRDLK 574
>At1g78940.1 68414.m09203 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 680
Score = 28.3 bits (60), Expect = 4.5
Identities = 17/43 (39%), Positives = 23/43 (53%)
Frame = +2
Query: 146 GSTPFPKWQLAILLGAPIAIGLGYLYLRNRLEDPEKRKHQNLK 274
G+TP WQL + A IA GL +L+ PE H++LK
Sbjct: 463 GNTPPITWQLRFRIAAEIATGLLFLHQTK----PEPIVHRDLK 501
>At5g09420.1 68418.m01091 chloroplast outer membrane translocon
subunit, putative similar to component of chloroplast
outer membrane translocon Toc64 [Pisum sativum]
GI:7453538; contains Pfam profiles PF01425: Amidase,
PF00515: TPR Domain
Length = 603
Score = 27.9 bits (59), Expect = 6.0
Identities = 11/32 (34%), Positives = 20/32 (62%)
Frame = +1
Query: 334 IERAMKLKGAGNRAFHAGEYDKAIALYNEALK 429
+E + +K GN A+ +++KA+ Y EA+K
Sbjct: 485 MEASEVMKEKGNAAYKGKQWNKAVNFYTEAIK 516
>At5g50830.1 68418.m06297 expressed protein
Length = 281
Score = 27.5 bits (58), Expect = 7.9
Identities = 18/43 (41%), Positives = 25/43 (58%)
Frame = +2
Query: 194 PIAIGLGYLYLRNRLEDPEKRKHQNLKQKRQYLWIMKKTLLRY 322
P+ G+ L LR RLE+ +KR H + + Q L KK LLR+
Sbjct: 23 PLPAGIRPL-LRRRLEEMKKRSHAGVLKGSQTL--SKKELLRH 62
>At3g45060.1 68416.m04857 high-affinity nitrate transporter,
putative similar to trans-membrane nitrate transporter
protein AtNRT2:1 [Arabidopsis thaliana] GI:3747058,
high-affinity nitrate transporter ACH1 [Arabidopsis
thaliana] GI:3608362
Length = 542
Score = 27.5 bits (58), Expect = 7.9
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +2
Query: 125 FEDMASTGSTPFPKWQLAILLGAPIAIGLGYLYL 226
F + TG+TPF W+ A + + I +G L L
Sbjct: 220 FHVIKLTGATPFTAWRFAFFIPGILQIVMGILVL 253
>At3g19160.1 68416.m02433 adenylate isopentenyltransferase 8 /
adenylate dimethylallyltransferase / cytokinin synthase
(IPT8) identical to adenylate isopentenyltransferase
(IPT8) [Arabidopsis thaliana] GI:14279068
Length = 330
Score = 27.5 bits (58), Expect = 7.9
Identities = 11/22 (50%), Positives = 17/22 (77%)
Frame = +1
Query: 301 EENTTKVSESAIERAMKLKGAG 366
+ENT ++++ IER MKLK +G
Sbjct: 268 KENTWRLAKKQIERIMKLKSSG 289
>At1g80070.1 68414.m09373 splicing factor, putative strong
similarity to splicing factor Prp8 [Homo sapiens]
GI:3661610; contains Pfam profile PF01398:
Mov34/MPN/PAD-1 family
Length = 2382
Score = 27.5 bits (58), Expect = 7.9
Identities = 12/33 (36%), Positives = 16/33 (48%)
Frame = +3
Query: 426 EACPPDRPVDLATFYQNRSACYEKREMWNKLKK 524
E CPP PV + YQ CY E+ ++ K
Sbjct: 479 EHCPPAYPVKVRVSYQKLLKCYVLNELHHRPPK 511
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,195,294
Number of Sequences: 28952
Number of extensions: 271949
Number of successful extensions: 849
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 819
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 849
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1305036432
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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