Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0677
(648 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_03_1014 - 26902971-26903085,26903182-26903270,26904302-269043... 109 2e-24
02_01_0561 + 4120268-4120339,4121462-4121588,4121715-4121770,412... 101 7e-22
08_02_1436 + 27083698-27084111,27084333-27084416,27084502-270845... 31 0.79
11_01_0617 - 4939108-4939259,4939584-4940259 31 1.0
02_03_0138 - 15629421-15629440,15629521-15629752,15630115-156303... 31 1.0
04_03_0870 + 20431215-20431419,20432559-20433439,20433829-204339... 29 2.4
03_01_0502 - 3779551-3779562,3779863-3780012,3780129-3780172,378... 29 3.2
11_01_0676 - 5511755-5511831,5512857-5513052,5513462-5513577,551... 29 4.2
05_04_0061 + 17582368-17582606,17582716-17583090,17593677-17594265 29 4.2
01_06_0813 - 32165310-32165546,32165691-32165783,32166075-321662... 29 4.2
12_02_0881 - 23970143-23970433,23970814-23971116,23971490-239720... 28 5.6
07_03_0537 - 19218461-19218982,19219482-19219868,19219993-192201... 28 7.4
06_03_0510 - 21615724-21615909,21615992-21616075,21616164-216162... 28 7.4
11_06_0690 + 26303733-26306540 27 9.7
03_05_0877 + 28443481-28443538,28443641-28443911,28444028-284442... 27 9.7
03_02_0087 + 5553730-5553842,5555221-5555353,5555887-5556023,555... 27 9.7
01_06_0458 + 29531069-29531126,29531247-29531302,29531407-295315... 27 9.7
>06_03_1014 -
26902971-26903085,26903182-26903270,26904302-26904380,
26904488-26904585,26904848-26904952,26905031-26905117,
26905218-26905412,26905890-26905996,26906559-26906754,
26906865-26906966,26907100-26907171,26907404-26907505,
26907638-26907675,26907769-26907880,26907972-26908028,
26908122-26908177,26908283-26908409,26908856-26908910,
26908919-26909049
Length = 640
Score = 109 bits (262), Expect = 2e-24
Identities = 58/119 (48%), Positives = 77/119 (64%), Gaps = 2/119 (1%)
Frame = +1
Query: 256 QVYEETSGVTVGDPVLRTGKPLSVELGPXILGSIFDGIQRPLKDINELTQSIYIPKGINV 435
QVYEET+G+ V DPVLRT KPLSVELGP ILG+IFDGIQRPLK I + +YIP+G++V
Sbjct: 104 QVYEETAGLMVNDPVLRTRKPLSVELGPGILGNIFDGIQRPLKTIAIKSGDVYIPRGVSV 163
Query: 436 PSLAREVDWEFNPLNVKVGPTSPVGFVWYCTREHSGQAQDVG-PAQSQGN-SYLYRTGR 606
P+L ++ W+F P + VG G ++ E++ V P S G SY+ G+
Sbjct: 164 PALDKDQLWDFEPKKLGVGDAITGGDLYATVFENTLMKHHVALPPGSMGKISYIAPAGQ 222
Score = 68.1 bits (159), Expect = 6e-12
Identities = 33/47 (70%), Positives = 37/47 (78%)
Frame = +2
Query: 113 RFGYVFAVSGPVVTAEKMSGSAMYELVRVGYNELVGEIXRLEGDMAT 253
R G V AVSGPVV A+ M G+AMYELVRVG + L+GEI RLEGD AT
Sbjct: 56 RIGGVLAVSGPVVVADGMGGAAMYELVRVGNDNLIGEIIRLEGDSAT 102
Score = 50.4 bits (115), Expect = 1e-06
Identities = 20/37 (54%), Positives = 27/37 (72%)
Frame = +2
Query: 509 DLYGIVHENTLVKHRMLVPPKAKGTVTYIAPAGNYKV 619
DLY V ENTL+KH + +PP + G ++YIAPAG Y +
Sbjct: 189 DLYATVFENTLMKHHVALPPGSMGKISYIAPAGQYSL 225
>02_01_0561 +
4120268-4120339,4121462-4121588,4121715-4121770,
4121841-4121912,4122017-4122128,4122247-4122284,
4122412-4122513,4122619-4122675,4122755-4122826,
4122992-4123093,4123210-4123405,4123988-4124094,
4124497-4124691,4124771-4124857,4124905-4124913,
4125599-4125703,4126067-4126164,4126250-4126328,
4126912-4127000,4127086-4127200
Length = 629
Score = 101 bits (241), Expect = 7e-22
Identities = 57/124 (45%), Positives = 76/124 (61%), Gaps = 7/124 (5%)
Frame = +1
Query: 256 QVYEETSGVTVGDPVLRTGK-----PLSVELGPXILGSIFDGIQRPLKDINELTQSIYIP 420
QVYEET+G+ V DPVLRT K PLSVELGP ILG+IFDGIQRPLK I + +YIP
Sbjct: 66 QVYEETAGLMVNDPVLRTRKVMPAQPLSVELGPGILGNIFDGIQRPLKTIAIKSGDVYIP 125
Query: 421 KGINVPSLAREVDWEFNPLNVKVGPTSPVGFVWYCTREHSGQAQDVG-PAQSQGN-SYLY 594
+G++VP+L ++ W F P + VG G ++ E++ V P + G SY+
Sbjct: 126 RGVSVPALDKDALWHFKPEKLGVGDIITGGDLYAIVNENTLMQHKVALPPGAMGKISYIA 185
Query: 595 RTGR 606
G+
Sbjct: 186 PAGQ 189
Score = 77.0 bits (181), Expect = 1e-14
Identities = 37/64 (57%), Positives = 45/64 (70%)
Frame = +2
Query: 62 MASKGGLRTIANEENEERFGYVFAVSGPVVTAEKMSGSAMYELVRVGYNELVGEIXRLEG 241
MA + T + E E +GYV VSGPVV A+ M G+AMYELVRVG++ L+GEI RLEG
Sbjct: 1 MAFGDRITTFEDSEKESEYGYVRKVSGPVVVADGMGGAAMYELVRVGHDNLIGEIIRLEG 60
Query: 242 DMAT 253
D AT
Sbjct: 61 DSAT 64
Score = 61.3 bits (142), Expect = 6e-10
Identities = 25/45 (55%), Positives = 35/45 (77%)
Frame = +2
Query: 509 DLYGIVHENTLVKHRMLVPPKAKGTVTYIAPAGNYKVTDVVLETD 643
DLY IV+ENTL++H++ +PP A G ++YIAPAG Y + D VLE +
Sbjct: 156 DLYAIVNENTLMQHKVALPPGAMGKISYIAPAGQYSLQDTVLELE 200
>08_02_1436 +
27083698-27084111,27084333-27084416,27084502-27084551,
27084676-27084724,27085471-27085545,27085724-27085837
Length = 261
Score = 31.1 bits (67), Expect = 0.79
Identities = 18/61 (29%), Positives = 29/61 (47%), Gaps = 3/61 (4%)
Frame = +1
Query: 430 NVPSLAREVDWEFNPLNVKVGPTSPVGF---VWYCTREHSGQAQDVGPAQSQGNSYLYRT 600
NVP + E ++ + V GP+ P+GF Y +GQ D + +G Y++R
Sbjct: 138 NVPMVTTESGLQYKDIKVGEGPSPPIGFQVAANYVAMVPNGQIFD--SSLEKGQPYIFRV 195
Query: 601 G 603
G
Sbjct: 196 G 196
>11_01_0617 - 4939108-4939259,4939584-4940259
Length = 275
Score = 30.7 bits (66), Expect = 1.0
Identities = 18/57 (31%), Positives = 30/57 (52%)
Frame = +2
Query: 80 LRTIANEENEERFGYVFAVSGPVVTAEKMSGSAMYELVRVGYNELVGEIXRLEGDMA 250
L +A EE+EER G F V+ + +A+++ VR+G LVG + + +A
Sbjct: 116 LLDMAMEEDEERGGARFRVADVLEKQNGRRETALHDAVRLGDERLVGHLMAVHPRLA 172
>02_03_0138 -
15629421-15629440,15629521-15629752,15630115-15630348,
15630486-15630709,15631225-15631509,15631549-15631690
Length = 378
Score = 30.7 bits (66), Expect = 1.0
Identities = 14/23 (60%), Positives = 18/23 (78%)
Frame = +2
Query: 569 KAKGTVTYIAPAGNYKVTDVVLE 637
KA+ T++ AGNY+VTDVVLE
Sbjct: 71 KARMTISLDRGAGNYEVTDVVLE 93
>04_03_0870 +
20431215-20431419,20432559-20433439,20433829-20433990,
20434742-20435001,20435110-20435200,20435487-20435675
Length = 595
Score = 29.5 bits (63), Expect = 2.4
Identities = 26/98 (26%), Positives = 43/98 (43%), Gaps = 5/98 (5%)
Frame = +1
Query: 355 IFDGIQRPLKDINELTQSIYIPKGINVPSLAREVDWEFNPLNVKVGPTSPVGF-----VW 519
++ G+ RP D+N Q++ +P+ + P L V NP+ V G + F W
Sbjct: 140 MYTGVNRP--DVNYQVQNVALPRNGSDPLLREWVKPGHNPVIVPEGGINATQFRDPTTAW 197
Query: 520 YCTREHSGQAQDVGPAQSQGNSYLYRTGRELQSHRRXA 633
H QS+G +Y+YR+ R+ + R A
Sbjct: 198 RGADGHWRLLVGSLAGQSRGVAYVYRS-RDFRRWTRAA 234
>03_01_0502 -
3779551-3779562,3779863-3780012,3780129-3780172,
3780256-3780319,3780422-3780655,3780765-3780908,
3781027-3781221,3781447-3781522,3781689-3781788,
3781955-3781988,3782076-3782160,3782226-3782290,
3782380-3782478,3782810-3782875,3785485-3785721
Length = 534
Score = 29.1 bits (62), Expect = 3.2
Identities = 18/43 (41%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
Frame = -2
Query: 353 EPKIXGPSSTDKGFPVRSTGSPTVTPEVSSYTW--WWPCHLQD 231
EP+ GP + KGF TG P+V V+ TW W+P L D
Sbjct: 288 EPEGTGPLAVLKGFRNLPTGMPSVL-IVTGLTWLSWFPFILYD 329
>11_01_0676 -
5511755-5511831,5512857-5513052,5513462-5513577,
5513752-5514597,5515515-5515766,5522344-5525206
Length = 1449
Score = 28.7 bits (61), Expect = 4.2
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = +2
Query: 158 EKMSGSAMYELVRVGYNELVGEI 226
EKMS + EL+ +GYN+L G I
Sbjct: 469 EKMSNLSSLELIDLGYNQLTGAI 491
>05_04_0061 + 17582368-17582606,17582716-17583090,17593677-17594265
Length = 400
Score = 28.7 bits (61), Expect = 4.2
Identities = 14/40 (35%), Positives = 16/40 (40%)
Frame = -2
Query: 362 SKMEPKIXGPSSTDKGFPVRSTGSPTVTPEVSSYTWWWPC 243
S EP P S G+ R V+ E WWWPC
Sbjct: 15 STTEPAKSSPPSQRYGYLERIRNLSVVSAEAGR--WWWPC 52
>01_06_0813 -
32165310-32165546,32165691-32165783,32166075-32166218,
32166685-32166771,32166858-32167077,32167879-32168039
Length = 313
Score = 28.7 bits (61), Expect = 4.2
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = -3
Query: 214 EFIVTDTDQLVHSRSGHLFGSDDGSRYGEDISEPLL 107
EF+V +T++L H + G D+ + ED+ EPLL
Sbjct: 115 EFMVRETEKL-HQQVGRYKSPDEHPFFPEDLPEPLL 149
>12_02_0881 -
23970143-23970433,23970814-23971116,23971490-23972077,
23972606-23972761,23972852-23972910,23974294-23974561
Length = 554
Score = 28.3 bits (60), Expect = 5.6
Identities = 16/52 (30%), Positives = 24/52 (46%), Gaps = 3/52 (5%)
Frame = +1
Query: 319 LSVELGPXILGSIFDGIQRPLKDINELTQSI---YIPKGINVPSLAREVDWE 465
L LGP +LG DG R ++D+ + I +P + VP E W+
Sbjct: 92 LGRRLGPRLLGRGNDGSMRVMRDLYRMLDEINSEEVPVDLKVPDSFDEFIWD 143
>07_03_0537 -
19218461-19218982,19219482-19219868,19219993-19220154,
19220464-19221117,19221233-19221277,19223300-19223845,
19223930-19224307,19224642-19225313,19225373-19225456
Length = 1149
Score = 27.9 bits (59), Expect = 7.4
Identities = 14/28 (50%), Positives = 18/28 (64%), Gaps = 4/28 (14%)
Frame = +3
Query: 138 LDPSSLPKRC--PDLLCTS--WSVSVTM 209
+DP+S+PK C PD LC S W VS +
Sbjct: 856 VDPASIPKHCAAPDNLCFSRTWLVSFNL 883
>06_03_0510 -
21615724-21615909,21615992-21616075,21616164-21616217,
21616324-21616371,21616529-21616611,21616963-21617113,
21617648-21617785,21617966-21618094,21618391-21618596,
21618734-21618845,21619145-21619204,21619331-21619429,
21619520-21619575,21620230-21620313,21621407-21621500
Length = 527
Score = 27.9 bits (59), Expect = 7.4
Identities = 16/55 (29%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = +1
Query: 256 QVYEETSGVTVGDPVLR-TGKPLSVELGPXILGSIFDGIQRPLKDINELTQSIYI 417
QV+E TSG+ ++ TG+ L + +LG IF+G +P+ + + Y+
Sbjct: 111 QVFEGTSGIDNKYTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYL 165
>11_06_0690 + 26303733-26306540
Length = 935
Score = 27.5 bits (58), Expect = 9.7
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = -3
Query: 127 DISEPLLILLIGDRPQTAFARHFELVILYPRRERWKRRTENG 2
D + PL + L+G RP+ + R + V+ Y R + +NG
Sbjct: 827 DFAAPLTMALLGRRPRPSRVRQRQQVVPYSPRRSNRLAAKNG 868
>03_05_0877 +
28443481-28443538,28443641-28443911,28444028-28444242,
28444329-28445057,28445143-28445297,28445384-28445965
Length = 669
Score = 27.5 bits (58), Expect = 9.7
Identities = 15/36 (41%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = +2
Query: 74 GGLRTIANEENEERFGYVFAVSGPVV-TAEKMSGSA 178
GG RT E+ EE+ V V GP++ K SG A
Sbjct: 621 GGARTAEKEDYEEKLKEVEQVCGPIIKQVYKKSGDA 656
>03_02_0087 +
5553730-5553842,5555221-5555353,5555887-5556023,
5556254-5556311,5556403-5556642
Length = 226
Score = 27.5 bits (58), Expect = 9.7
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = -2
Query: 578 PWLWAGPTSCA*PECSRVQYHTNPTGD 498
PWL A ++ C V YHT+P+ D
Sbjct: 193 PWLLAKSSALTRANCGAVIYHTDPSVD 219
>01_06_0458 +
29531069-29531126,29531247-29531302,29531407-29531505,
29531989-29532048,29532285-29532396,29532459-29532694,
29533092-29533220,29533325-29533462,29534043-29534193,
29534394-29534476,29534658-29534705,29534828-29534881,
29534971-29535054,29535152-29535337
Length = 497
Score = 27.5 bits (58), Expect = 9.7
Identities = 15/55 (27%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = +1
Query: 256 QVYEETSGVTVGDPVLR-TGKPLSVELGPXILGSIFDGIQRPLKDINELTQSIYI 417
QV+E TSG+ ++ TG+ L + +LG +F+G +P+ + + Y+
Sbjct: 71 QVFEGTSGIDNKYTTVQFTGEVLKTPVSLDMLGRVFNGSGKPIDNGPPILPEAYL 125
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,240,113
Number of Sequences: 37544
Number of extensions: 429271
Number of successful extensions: 1100
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1065
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1099
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1608522592
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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