Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0677
(648 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g78900.1 68414.m09198 vacuolar ATP synthase catalytic subunit... 112 2e-25
At5g08690.1 68418.m01034 ATP synthase beta chain 2, mitochondria... 39 0.002
At5g08680.1 68418.m01033 ATP synthase beta chain, mitochondrial,... 39 0.002
At5g08670.1 68418.m01032 ATP synthase beta chain 1, mitochondria... 39 0.002
At2g43560.1 68415.m05412 immunophilin / FKBP-type peptidyl-proly... 32 0.38
At5g38340.1 68418.m04627 disease resistance protein (TIR-NBS-LRR... 30 1.5
At5g57260.1 68418.m07152 cytochrome P450 71B10 identical to cyto... 28 4.7
At1g17970.1 68414.m02223 zinc finger (C3HC4-type RING finger) fa... 28 4.7
At4g38510.2 68417.m05447 vacuolar ATP synthase subunit B, putati... 28 6.1
At4g38510.1 68417.m05446 vacuolar ATP synthase subunit B, putati... 28 6.1
At3g26030.1 68416.m03242 serine/threonine protein phosphatase 2A... 28 6.1
At3g01040.1 68416.m00005 glycosyl transferase family 8 protein c... 28 6.1
At1g76030.1 68414.m08827 vacuolar ATP synthase subunit B / V-ATP... 28 6.1
At1g20260.2 68414.m02530 vacuolar ATP synthase subunit B, putati... 28 6.1
At1g20260.1 68414.m02529 vacuolar ATP synthase subunit B, putati... 28 6.1
>At1g78900.1 68414.m09198 vacuolar ATP synthase catalytic subunit A
/ V-ATPase A subunit / vacuolar proton pump alpha
subunit / V-ATPase 69 kDa subunit identical to SP|O23654
Vacuolar ATP synthase catalytic subunit A (EC 3.6.3.14)
(V-ATPase A subunit) (Vacuolar proton pump alpha
subunit) (V-ATPase 69 kDa subunit) {Arabidopsis
thaliana}
Length = 623
Score = 112 bits (269), Expect = 2e-25
Identities = 53/95 (55%), Positives = 69/95 (72%)
Frame = +1
Query: 256 QVYEETSGVTVGDPVLRTGKPLSVELGPXILGSIFDGIQRPLKDINELTQSIYIPKGINV 435
QVYEET+G+TV DPVLRT KPLSVELGP ILG+IFDGIQRPLK I ++ +YIP+G++V
Sbjct: 68 QVYEETAGLTVNDPVLRTHKPLSVELGPGILGNIFDGIQRPLKTIARISGDVYIPRGVSV 127
Query: 436 PSLAREVDWEFNPLNVKVGPTSPVGFVWYCTREHS 540
P+L ++ WEF P G T G ++ E++
Sbjct: 128 PALDKDCLWEFQPNKFVEGDTITGGDLYATVFENT 162
Score = 79.8 bits (188), Expect = 1e-15
Identities = 37/60 (61%), Positives = 46/60 (76%)
Frame = +2
Query: 74 GGLRTIANEENEERFGYVFAVSGPVVTAEKMSGSAMYELVRVGYNELVGEIXRLEGDMAT 253
G L T ++E E +GYV VSGPVV A+ M+G+AMYELVRVG++ L+GEI RLEGD AT
Sbjct: 7 GKLTTFEDDEKESEYGYVRKVSGPVVVADGMAGAAMYELVRVGHDNLIGEIIRLEGDSAT 66
Score = 57.6 bits (133), Expect = 7e-09
Identities = 24/45 (53%), Positives = 31/45 (68%)
Frame = +2
Query: 509 DLYGIVHENTLVKHRMLVPPKAKGTVTYIAPAGNYKVTDVVLETD 643
DLY V ENTL+ H + +PP A G +TYIAPAG Y + D V+E +
Sbjct: 153 DLYATVFENTLMNHLVALPPDAMGKITYIAPAGQYSLKDTVIELE 197
>At5g08690.1 68418.m01034 ATP synthase beta chain 2, mitochondrial
identical to SP|P83484 ATP synthase beta chain 2,
mitochondrial precursor (EC 3.6.3.14) {Arabidopsis
thaliana}; strong similarity to SP|P17614 ATP synthase
beta chain, mitochondrial precursor (EC 3.6.3.14)
{Nicotiana plumbaginifolia}; contains Pfam profiles
PF00006: ATP synthase alpha/beta family
nucleotide-binding domain, PF00306: ATP synthase ab C
terminal, PF02874: ATP synthase alpha/beta family
beta-barrel domain; supporting cDNA
gi|26452187|dbj|AK118582.1|
Length = 556
Score = 39.1 bits (87), Expect = 0.002
Identities = 19/58 (32%), Positives = 31/58 (53%)
Frame = +1
Query: 271 TSGVTVGDPVLRTGKPLSVELGPXILGSIFDGIQRPLKDINELTQSIYIPKGINVPSL 444
T G+ G VL TG P++V +G LG I + + P+ + E+ Y+P + P+L
Sbjct: 141 TEGLVRGRKVLNTGAPITVPVGRATLGRIMNVLGEPIDERGEIKTEHYLPIHRDAPAL 198
>At5g08680.1 68418.m01033 ATP synthase beta chain, mitochondrial,
putative strong similarity to SP|P83483 ATP synthase
beta chain 1, mitochondrial precursor (EC 3.6.3.14)
{Arabidopsis thaliana}, SP|P17614 ATP synthase beta
chain, mitochondrial precursor (EC 3.6.3.14) {Nicotiana
plumbaginifolia}; contains Pfam profiles PF00006: ATP
synthase alpha/beta family nucleotide-binding domain,
PF00306: ATP synthase ab C terminal, PF02874: ATP
synthase alpha/beta family beta-barrel domain
Length = 559
Score = 39.1 bits (87), Expect = 0.002
Identities = 19/58 (32%), Positives = 31/58 (53%)
Frame = +1
Query: 271 TSGVTVGDPVLRTGKPLSVELGPXILGSIFDGIQRPLKDINELTQSIYIPKGINVPSL 444
T G+ G VL TG P++V +G LG I + + P+ + E+ Y+P + P+L
Sbjct: 144 TEGLVRGRKVLNTGAPITVPVGRATLGRIMNVLGEPIDERGEIKTEHYLPIHRDAPAL 201
>At5g08670.1 68418.m01032 ATP synthase beta chain 1, mitochondrial
identical to SP|P83483 ATP synthase beta chain 1,
mitochondrial precursor (EC 3.6.3.14) {Arabidopsis
thaliana}; strong similarity to SP|P17614 ATP synthase
beta chain, mitochondrial precursor (EC 3.6.3.14)
{Nicotiana plumbaginifolia}; contains Pfam profiles
PF00006: ATP synthase alpha/beta family
nucleotide-binding domain, PF00306: ATP synthase ab C
terminal, PF02874: ATP synthase alpha/beta family
beta-barrel domain; supporting cDNA
gi|26452102|dbj|AK118538.1|
Length = 556
Score = 39.1 bits (87), Expect = 0.002
Identities = 19/58 (32%), Positives = 31/58 (53%)
Frame = +1
Query: 271 TSGVTVGDPVLRTGKPLSVELGPXILGSIFDGIQRPLKDINELTQSIYIPKGINVPSL 444
T G+ G VL TG P++V +G LG I + + P+ + E+ Y+P + P+L
Sbjct: 141 TEGLVRGRKVLNTGAPITVPVGRATLGRIMNVLGEPIDERGEIKTEHYLPIHRDAPAL 198
>At2g43560.1 68415.m05412 immunophilin / FKBP-type peptidyl-prolyl
cis-trans isomerase family protein identical to Probable
FKBP-type peptidyl-prolyl cis-trans isomerase 2,
chloroplast precursor (Ppiase) (Rotamase)
(SP:O22870)[Arabidopsis thaliana]; contains Pfam
PF00254: peptidyl-prolyl cis-trans isomerase, FKBP-type
Length = 223
Score = 31.9 bits (69), Expect = 0.38
Identities = 21/61 (34%), Positives = 29/61 (47%), Gaps = 3/61 (4%)
Frame = +1
Query: 430 NVPSLAREVDWEFNPLNVKVGPTSPVGF---VWYCTREHSGQAQDVGPAQSQGNSYLYRT 600
NVP + E ++ + V GP+ PVGF Y SGQ D + +G YL+R
Sbjct: 98 NVPMVTTESGLQYKDIKVGRGPSPPVGFQVAANYVAMVPSGQIFD--SSLEKGLPYLFRV 155
Query: 601 G 603
G
Sbjct: 156 G 156
>At5g38340.1 68418.m04627 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1059
Score = 29.9 bits (64), Expect = 1.5
Identities = 9/34 (26%), Positives = 24/34 (70%), Gaps = 1/34 (2%)
Frame = +1
Query: 379 LKDINELTQSIYIPKGIN-VPSLAREVDWEFNPL 477
L+ + + ++ +Y+P+G+N +P R ++W++ P+
Sbjct: 613 LRVLRDRSEKLYLPQGLNYLPKKLRLIEWDYFPM 646
>At5g57260.1 68418.m07152 cytochrome P450 71B10 identical to
cytochrome P450 71B10 (SP:Q9LVD2) [Arabidopsis thaliana]
Length = 1483
Score = 28.3 bits (60), Expect = 4.7
Identities = 16/41 (39%), Positives = 20/41 (48%)
Frame = -3
Query: 637 FKHXVCDFVVPGRCDIGNCSLGFGRDQHPVLDQSVLVYNTI 515
F + VC V+ G C IG L G + V D VLV N +
Sbjct: 681 FDNFVCSAVISGFCKIGKPELALGFFESAV-DSGVLVPNLV 720
>At1g17970.1 68414.m02223 zinc finger (C3HC4-type RING finger)
family protein similar to Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 368
Score = 28.3 bits (60), Expect = 4.7
Identities = 15/46 (32%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = +1
Query: 403 QSIYIPKGINVPSLAREVDWEFNPLNVKVGPT-SPVGFVWYCTREH 537
+S+ P+G N+PS R++D + N N +G + P+ F+ T H
Sbjct: 163 RSVDPPRGRNIPSSRRKIDVDNNNYNHTLGSSVLPIRFLNQETHSH 208
>At4g38510.2 68417.m05447 vacuolar ATP synthase subunit B, putative
/ V-ATPase B subunit, putative / vacuolar proton pump B
subunit, putative / V-ATPase 57 kDa subunit, putative
very strong similarity to SP|P11574 Vacuolar ATP
synthase subunit B (EC 3.6.3.14) (V-ATPase B subunit)
(Vacuolar proton pump B subunit) (V-ATPase 57 kDa
subunit) {Arabidopsis thaliana}; contains Pfam profiles
PF00006: ATP synthase alpha/beta family
nucleotide-binding domain, PF00306: ATP synthase ab C
terminal, PF02874: ATP synthase alpha/beta family
beta-barrel domain
Length = 487
Score = 27.9 bits (59), Expect = 6.1
Identities = 16/55 (29%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = +1
Query: 256 QVYEETSGVTVGDPVLR-TGKPLSVELGPXILGSIFDGIQRPLKDINELTQSIYI 417
QV+E TSG+ ++ TG+ L + +LG IF+G +P+ + + Y+
Sbjct: 70 QVFEGTSGIDNKYTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYL 124
>At4g38510.1 68417.m05446 vacuolar ATP synthase subunit B, putative
/ V-ATPase B subunit, putative / vacuolar proton pump B
subunit, putative / V-ATPase 57 kDa subunit, putative
very strong similarity to SP|P11574 Vacuolar ATP
synthase subunit B (EC 3.6.3.14) (V-ATPase B subunit)
(Vacuolar proton pump B subunit) (V-ATPase 57 kDa
subunit) {Arabidopsis thaliana}; contains Pfam profiles
PF00006: ATP synthase alpha/beta family
nucleotide-binding domain, PF00306: ATP synthase ab C
terminal, PF02874: ATP synthase alpha/beta family
beta-barrel domain
Length = 487
Score = 27.9 bits (59), Expect = 6.1
Identities = 16/55 (29%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = +1
Query: 256 QVYEETSGVTVGDPVLR-TGKPLSVELGPXILGSIFDGIQRPLKDINELTQSIYI 417
QV+E TSG+ ++ TG+ L + +LG IF+G +P+ + + Y+
Sbjct: 70 QVFEGTSGIDNKYTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYL 124
>At3g26030.1 68416.m03242 serine/threonine protein phosphatase 2A
(PP2A) regulatory subunit B', putative similar to
SWISS-PROT:Q28653 serine/threonine protein phosphatase
2A, 56 kDa regulatory subunit, delta isoform (PP2A, B
subunit, B' delta isoform, PP2A, B subunit, B56 delta
isoform, PP2A, B subunit, PR61 delta isoform, PP2A, B
subunit, R5 delta isoform, PP2A, B subunit, B'-gamma)
[Oryctolagus cuniculus]; contains Pfam domain, PF01603:
Protein phosphatase 2A regulatory B subunit (B56 family)
Length = 477
Score = 27.9 bits (59), Expect = 6.1
Identities = 15/50 (30%), Positives = 24/50 (48%)
Frame = +1
Query: 250 HHQVYEETSGVTVGDPVLRTGKPLSVELGPXILGSIFDGIQRPLKDINEL 399
H +T + D + TGK + +LGSI +G PLK+ ++L
Sbjct: 231 HRPFIRKTMNNILYDFIFETGKHSGIAEFLEVLGSIINGFALPLKEEHKL 280
>At3g01040.1 68416.m00005 glycosyl transferase family 8 protein
contains Pfam profile: PF01501 glycosyl transferase
family 8
Length = 533
Score = 27.9 bits (59), Expect = 6.1
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 3/39 (7%)
Frame = +1
Query: 331 LGPXILGSIFDGIQRPLKDINELTQSI---YIPKGINVP 438
LGP +LG I D QR ++D ++ + IP G+ +P
Sbjct: 77 LGPRLLGRIDDSEQRLVRDFYKILNEVSTQEIPDGLKLP 115
>At1g76030.1 68414.m08827 vacuolar ATP synthase subunit B / V-ATPase
B subunit / vacuolar proton pump B subunit / V-ATPase 57
kDa subunit identical to SP|P11574 Vacuolar ATP synthase
subunit B (EC 3.6.3.14) (V-ATPase B subunit) (Vacuolar
proton pump B subunit) (V-ATPase 57 kDa subunit)
{Arabidopsis thaliana}
Length = 486
Score = 27.9 bits (59), Expect = 6.1
Identities = 16/55 (29%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = +1
Query: 256 QVYEETSGVTVGDPVLR-TGKPLSVELGPXILGSIFDGIQRPLKDINELTQSIYI 417
QV+E TSG+ ++ TG+ L + +LG IF+G +P+ + + Y+
Sbjct: 69 QVFEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYL 123
>At1g20260.2 68414.m02530 vacuolar ATP synthase subunit B, putative
/ V-ATPase B subunit, putative / vacuolar proton pump B
subunit, putative / V-ATPase 57 kDa subunit, putative
strong similarity to SP|P11574 Vacuolar ATP synthase
subunit B (EC 3.6.3.14) (V-ATPase B subunit) (Vacuolar
proton pump B subunit) (V-ATPase 57 kDa subunit)
{Arabidopsis thaliana}; contains Pfam profiles PF00006:
ATP synthase alpha/beta family nucleotide-binding
domain, PF02874: ATP synthase alpha/beta family
beta-barrel domain
Length = 485
Score = 27.9 bits (59), Expect = 6.1
Identities = 16/55 (29%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = +1
Query: 256 QVYEETSGVTVGDPVLR-TGKPLSVELGPXILGSIFDGIQRPLKDINELTQSIYI 417
QV+E TSG+ ++ TG+ L + +LG IF+G +P+ + + Y+
Sbjct: 69 QVFEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYL 123
>At1g20260.1 68414.m02529 vacuolar ATP synthase subunit B, putative
/ V-ATPase B subunit, putative / vacuolar proton pump B
subunit, putative / V-ATPase 57 kDa subunit, putative
strong similarity to SP|P11574 Vacuolar ATP synthase
subunit B (EC 3.6.3.14) (V-ATPase B subunit) (Vacuolar
proton pump B subunit) (V-ATPase 57 kDa subunit)
{Arabidopsis thaliana}; contains Pfam profiles PF00006:
ATP synthase alpha/beta family nucleotide-binding
domain, PF02874: ATP synthase alpha/beta family
beta-barrel domain
Length = 330
Score = 27.9 bits (59), Expect = 6.1
Identities = 16/55 (29%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = +1
Query: 256 QVYEETSGVTVGDPVLR-TGKPLSVELGPXILGSIFDGIQRPLKDINELTQSIYI 417
QV+E TSG+ ++ TG+ L + +LG IF+G +P+ + + Y+
Sbjct: 69 QVFEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYL 123
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,083,337
Number of Sequences: 28952
Number of extensions: 330779
Number of successful extensions: 919
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 901
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 919
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1344285648
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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