Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0672
         (528 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    23   2.2  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    22   2.9  
U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       21   6.7  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     21   6.7  
AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    21   8.9  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    21   8.9  

>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 22.6 bits (46), Expect = 2.2
 Identities = 8/27 (29%), Positives = 15/27 (55%)
 Frame = +1

Query: 301 FEDGTFKLTIEFTXXYPNKPPTVRFVS 381
           F D  +K+  +FT  + N    ++F+S
Sbjct: 700 FVDRCYKMQEQFTLNFRNSDELIKFIS 726


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 22.2 bits (45), Expect = 2.9
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = +1

Query: 274  VIFGPHDTPFEDGT 315
            VI+GP DT F++ T
Sbjct: 1138 VIYGPSDTWFDENT 1151


>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 21.0 bits (42), Expect = 6.7
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +2

Query: 164 STPARRRLMRDFKRLQEDPP 223
           +TP   +LM D K+ Q D P
Sbjct: 57  NTPEILQLMSDLKQHQSDDP 76


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 21.0 bits (42), Expect = 6.7
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -2

Query: 278 ITAFQIIICYQLEL 237
           IT F IIIC++  L
Sbjct: 4   ITLFMIIICFERNL 17


>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 20.6 bits (41), Expect = 8.9
 Identities = 9/31 (29%), Positives = 16/31 (51%)
 Frame = +2

Query: 77  VFV*RCQSYSNSKVEKSHCVIT*VLKIKMST 169
           VF  RC+ Y N  +E    V   V  +++++
Sbjct: 174 VFTCRCKDYKNEDLEDQPVVYNDVNGVRINS 204


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 20.6 bits (41), Expect = 8.9
 Identities = 8/25 (32%), Positives = 13/25 (52%)
 Frame = +2

Query: 368 CDLYQKCXHPNVYADGGICLDILQN 442
           C+L      PN   +GG C D++ +
Sbjct: 219 CELNVDDCKPNPCQNGGTCHDLVNS 243


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 124,611
Number of Sequences: 336
Number of extensions: 2472
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12782794
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)