Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0672
(528 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC18B11.07c |rhp6|ubc2|Rad6 homolog, ubiquitin conjugating enz... 89 4e-19
SPBC119.02 |ubc4||ubiquitin conjugating enzyme Ubc4|Schizosaccha... 49 4e-07
SPAC10F6.05c |ubc6||ubiquitin conjugating enzyme Ubc6|Schizosacc... 47 2e-06
SPBP16F5.04 |ubc3|ubcp3|ubiquitin conjugating enzyme Ubc3|Schizo... 46 3e-06
SPCC1259.15c |ubc11|ubcdp, ubcp4|ubiquitin conjugating enzyme E2... 44 1e-05
SPBC1105.09 |ubc15||ubiquitin conjugating enzyme Ubc15|Schizosac... 44 1e-05
SPBC1198.09 |ubc16||ubiquitin conjugating enzyme Ubc16|Schizosac... 43 2e-05
SPAC30D11.13 |hus5|ubc9|SUMO conjugating enzyme Hus5|Schizosacch... 42 6e-05
SPAC1250.03 |ubc14||ubiquitin conjugating enzyme Ubc14|Schizosac... 40 2e-04
SPBC2D10.20 |ubc1||ubiquitin conjugating enzyme Ubc1|Schizosacch... 40 2e-04
SPCC338.05c |mms2|spm2|ubiquitin conjugating enzyme Mms2|Schizos... 40 3e-04
SPBC211.07c |ubc8||ubiquitin conjugating enzyme Ubc8|Schizosacch... 39 5e-04
SPAC11E3.04c |ubc13|spu13|ubiquitin conjugating enzyme Ubc13|Sch... 38 0.001
SPCC777.10c |ubc12||ubiquitin conjugating enzyme Ubc12|Schizosac... 38 0.001
SPCC794.08 |||HEAT repeat protein, unknown biological role|Schiz... 30 0.25
SPAC343.11c |msc1||multi-copy suppressor of Chk1 |Schizosaccharo... 27 1.3
SPAC27E2.02 |||IMPACT homolog|Schizosaccharomyces pombe|chr 1|||... 27 2.3
SPAC30.01c |sec72|sec7b|Sec7 domain|Schizosaccharomyces pombe|ch... 25 7.0
SPBC947.15c |||NADH dehydrogenase|Schizosaccharomyces pombe|chr ... 25 9.2
SPBPB10D8.01 |||cysteine transporter |Schizosaccharomyces pombe|... 25 9.2
>SPAC18B11.07c |rhp6|ubc2|Rad6 homolog, ubiquitin conjugating enzyme
E2 Rhp6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 151
Score = 89.0 bits (211), Expect = 4e-19
Identities = 54/112 (48%), Positives = 66/112 (58%), Gaps = 5/112 (4%)
Frame = +2
Query: 161 MSTPARRRLMRDFKRLQEDPPTGVSGAP-TDNIL*SGML*YLALMILHLKMEHSNSQ*NL 337
MST ARRRLMRDFKR+Q+DPP GVS +P +DN+ ML + A++I + L
Sbjct: 1 MSTTARRRLMRDFKRMQQDPPAGVSASPVSDNV----ML-WNAVIIGPADTPFEDGTFKL 55
Query: 338 XXXXXXXXXX----CDLYQKCXHPNVYADGGICLDILQNRWSPTYXVSAILT 481
HPNVYA+G +CLDILQNRWSPTY V+AILT
Sbjct: 56 VLSFDEQYPNKPPLVKFVSTMFHPNVYANGELCLDILQNRWSPTYDVAAILT 107
Score = 78.6 bits (185), Expect = 5e-16
Identities = 32/46 (69%), Positives = 37/46 (80%)
Frame = +1
Query: 253 HIMIWNAVIFGPHDTPFEDGTFKLTIEFTXXYPNKPPTVRFVSKMF 390
++M+WNAVI GP DTPFEDGTFKL + F YPNKPP V+FVS MF
Sbjct: 32 NVMLWNAVIIGPADTPFEDGTFKLVLSFDEQYPNKPPLVKFVSTMF 77
>SPBC119.02 |ubc4||ubiquitin conjugating enzyme
Ubc4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 147
Score = 49.2 bits (112), Expect = 4e-07
Identities = 19/42 (45%), Positives = 26/42 (61%)
Frame = +1
Query: 265 WNAVIFGPHDTPFEDGTFKLTIEFTXXYPNKPPTVRFVSKMF 390
W A I GP D+P+ G F L+I F YP KPP V F ++++
Sbjct: 33 WQATIMGPADSPYAGGVFFLSIHFPTDYPFKPPKVNFTTRIY 74
Score = 43.2 bits (97), Expect = 2e-05
Identities = 15/29 (51%), Positives = 23/29 (79%)
Frame = +2
Query: 392 HPNVYADGGICLDILQNRWSPTYXVSAIL 478
HPN+ ++G ICLDIL+++WSP +S +L
Sbjct: 75 HPNINSNGSICLDILRDQWSPALTISKVL 103
>SPAC10F6.05c |ubc6||ubiquitin conjugating enzyme
Ubc6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 227
Score = 47.2 bits (107), Expect = 2e-06
Identities = 18/43 (41%), Positives = 28/43 (65%)
Frame = +1
Query: 253 HIMIWNAVIFGPHDTPFEDGTFKLTIEFTXXYPNKPPTVRFVS 381
+I+ W+ +I GP DTP+E G + T+ F YP KPP +R ++
Sbjct: 33 NILEWHYIITGPPDTPYEGGQYHGTLIFPPDYPFKPPAIRMIT 75
>SPBP16F5.04 |ubc3|ubcp3|ubiquitin conjugating enzyme
Ubc3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 166
Score = 46.4 bits (105), Expect = 3e-06
Identities = 18/42 (42%), Positives = 26/42 (61%)
Frame = +1
Query: 265 WNAVIFGPHDTPFEDGTFKLTIEFTXXYPNKPPTVRFVSKMF 390
W+ +I GP TPFE G + T++F YP PPT++F + F
Sbjct: 38 WDCLIQGPDGTPFEGGLYPATLKFPSDYPLGPPTLKFECEFF 79
Score = 30.3 bits (65), Expect = 0.19
Identities = 11/26 (42%), Positives = 19/26 (73%)
Frame = +2
Query: 173 ARRRLMRDFKRLQEDPPTGVSGAPTD 250
A RRLM+++K L E+ P G++ P++
Sbjct: 6 ALRRLMKEYKELTENGPDGITAGPSN 31
Score = 29.9 bits (64), Expect = 0.25
Identities = 17/42 (40%), Positives = 19/42 (45%), Gaps = 13/42 (30%)
Frame = +2
Query: 392 HPNVYADGGICLDIL-------------QNRWSPTYXVSAIL 478
HPNVY DG +C+ IL RWSP V IL
Sbjct: 80 HPNVYKDGTVCISILHAPGDDPNMYESSSERWSPVQSVEKIL 121
>SPCC1259.15c |ubc11|ubcdp, ubcp4|ubiquitin conjugating enzyme E2-C
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 176
Score = 44.0 bits (99), Expect = 1e-05
Identities = 18/46 (39%), Positives = 27/46 (58%)
Frame = +1
Query: 253 HIMIWNAVIFGPHDTPFEDGTFKLTIEFTXXYPNKPPTVRFVSKMF 390
+++ W I GP DT +E FK+++ F YP PPT+ F S M+
Sbjct: 57 NLLHWAGTITGPSDTYYEGLKFKISMSFPANYPYSPPTIIFTSPMW 102
Score = 41.9 bits (94), Expect = 6e-05
Identities = 17/29 (58%), Positives = 20/29 (68%)
Frame = +2
Query: 392 HPNVYADGGICLDILQNRWSPTYXVSAIL 478
HPNV G ICLDIL+++WS Y V IL
Sbjct: 103 HPNVDMSGNICLDILKDKWSAVYNVQTIL 131
>SPBC1105.09 |ubc15||ubiquitin conjugating enzyme
Ubc15|Schizosaccharomyces pombe|chr 2|||Manual
Length = 167
Score = 44.0 bits (99), Expect = 1e-05
Identities = 17/45 (37%), Positives = 26/45 (57%)
Frame = +1
Query: 256 IMIWNAVIFGPHDTPFEDGTFKLTIEFTXXYPNKPPTVRFVSKMF 390
I W +I GP DT +E G F T+ F YP PP ++F ++++
Sbjct: 35 IFEWEVMIIGPEDTLYEGGFFHATLSFPQDYPLMPPKMKFTTEIW 79
Score = 25.4 bits (53), Expect = 5.3
Identities = 8/15 (53%), Positives = 12/15 (80%)
Frame = +2
Query: 392 HPNVYADGGICLDIL 436
HPNV+ +G +C+ IL
Sbjct: 80 HPNVHPNGEVCISIL 94
>SPBC1198.09 |ubc16||ubiquitin conjugating enzyme
Ubc16|Schizosaccharomyces pombe|chr 2|||Manual
Length = 160
Score = 43.2 bits (97), Expect = 2e-05
Identities = 19/41 (46%), Positives = 25/41 (60%)
Frame = +1
Query: 265 WNAVIFGPHDTPFEDGTFKLTIEFTXXYPNKPPTVRFVSKM 387
W AVI GP +TP+E G + L I YP PP+V F +K+
Sbjct: 37 WKAVIEGPTETPYEGGQWVLDIHVHEGYPISPPSVYFQTKI 77
Score = 35.1 bits (77), Expect = 0.007
Identities = 12/31 (38%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
Frame = +2
Query: 383 KCXHPNV-YADGGICLDILQNRWSPTYXVSA 472
K HPN+ + +G +C+DIL+ WSP + + +
Sbjct: 76 KIVHPNISWTNGEVCMDILKTHWSPAWSLQS 106
>SPAC30D11.13 |hus5|ubc9|SUMO conjugating enzyme
Hus5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 157
Score = 41.9 bits (94), Expect = 6e-05
Identities = 20/54 (37%), Positives = 26/54 (48%)
Frame = +1
Query: 229 CVRSSN**HIMIWNAVIFGPHDTPFEDGTFKLTIEFTXXYPNKPPTVRFVSKMF 390
C S +M W I G T +E G +KLT+ F YP +PP RF +F
Sbjct: 29 CKSSDGGLDLMNWKVGIPGKPKTSWEGGLYKLTMAFPEEYPTRPPKCRFTPPLF 82
Score = 33.5 bits (73), Expect = 0.020
Identities = 15/39 (38%), Positives = 18/39 (46%), Gaps = 2/39 (5%)
Frame = +2
Query: 368 CDLYQKCXHPNVYADGGICLDIL--QNRWSPTYXVSAIL 478
C HPNVY G +CL IL + W P + IL
Sbjct: 75 CRFTPPLFHPNVYPSGTVCLSILNEEEGWKPAITIKQIL 113
>SPAC1250.03 |ubc14||ubiquitin conjugating enzyme
Ubc14|Schizosaccharomyces pombe|chr 1|||Manual
Length = 155
Score = 40.3 bits (90), Expect = 2e-04
Identities = 13/42 (30%), Positives = 24/42 (57%)
Frame = +1
Query: 265 WNAVIFGPHDTPFEDGTFKLTIEFTXXYPNKPPTVRFVSKMF 390
W GP D+ + G F +++F YP +PPT+ F ++++
Sbjct: 39 WACTALGPSDSVYAGGKFHFSLKFPLDYPFQPPTIEFTTRIY 80
Score = 25.8 bits (54), Expect = 4.0
Identities = 11/30 (36%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Frame = +2
Query: 392 HPNVYADGGICLDIL-QNRWSPTYXVSAIL 478
HPN ++G +CL IL Q + P+ + ++L
Sbjct: 81 HPNFDSEGNVCLAILKQQVFKPSIKLRSVL 110
>SPBC2D10.20 |ubc1||ubiquitin conjugating enzyme
Ubc1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 217
Score = 39.9 bits (89), Expect = 2e-04
Identities = 17/33 (51%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
Frame = +2
Query: 383 KCXHPNVYAD-GGICLDILQNRWSPTYXVSAIL 478
K HPNV + G ICLDIL+++WSP Y + + L
Sbjct: 75 KIYHPNVSSQTGAICLDILKDQWSPVYTMKSAL 107
Score = 38.3 bits (85), Expect = 7e-04
Identities = 15/36 (41%), Positives = 22/36 (61%)
Frame = +1
Query: 283 GPHDTPFEDGTFKLTIEFTXXYPNKPPTVRFVSKMF 390
GP TP+E G F + IE YP +PP + F +K++
Sbjct: 42 GPEGTPYEGGYFVVDIEIPIDYPFRPPKMNFDTKIY 77
>SPCC338.05c |mms2|spm2|ubiquitin conjugating enzyme
Mms2|Schizosaccharomyces pombe|chr 3|||Manual
Length = 139
Score = 39.5 bits (88), Expect = 3e-04
Identities = 17/41 (41%), Positives = 23/41 (56%)
Frame = +1
Query: 265 WNAVIFGPHDTPFEDGTFKLTIEFTXXYPNKPPTVRFVSKM 387
WNA I GP + E+ + L I YP+ PP V FVS++
Sbjct: 41 WNATILGPAHSVHENRIYSLKIHCDANYPDAPPIVTFVSRI 81
>SPBC211.07c |ubc8||ubiquitin conjugating enzyme
Ubc8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 184
Score = 38.7 bits (86), Expect = 5e-04
Identities = 14/36 (38%), Positives = 24/36 (66%)
Frame = +1
Query: 283 GPHDTPFEDGTFKLTIEFTXXYPNKPPTVRFVSKMF 390
GP +TP+ G +K+ +E YP K P++ FV+++F
Sbjct: 38 GPSETPYSGGIWKVHVELPSEYPWKSPSIGFVNRIF 73
Score = 31.1 bits (67), Expect = 0.11
Identities = 11/33 (33%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Frame = +2
Query: 392 HPNV-YADGGICLDILQNRWSPTYXVSAILTXY 487
HPN+ G +CLD++ WSP + + I +
Sbjct: 74 HPNIDELSGSVCLDVINQTWSPMFDMINIFEVF 106
>SPAC11E3.04c |ubc13|spu13|ubiquitin conjugating enzyme
Ubc13|Schizosaccharomyces pombe|chr 1|||Manual
Length = 148
Score = 37.9 bits (84), Expect = 0.001
Identities = 25/100 (25%), Positives = 41/100 (41%)
Frame = +2
Query: 179 RRLMRDFKRLQEDPPTGVSGAPTDNIL*SGML*YLALMILHLKMEHSNSQ*NLXXXXXXX 358
+R++++ + L DPP G+ APT++ L + + + + L
Sbjct: 5 KRIIKEIETLTRDPPPGIVAAPTEDNLRYFKITMEGPQQSAYEGGKFHLELFLPDEYPMM 64
Query: 359 XXXCDLYQKCXHPNVYADGGICLDILQNRWSPTYXVSAIL 478
K HPNV G ICL L+ WSP + +L
Sbjct: 65 PPNVRFLTKIYHPNVDKLGRICLSTLKKDWSPALQIRTVL 104
Score = 37.9 bits (84), Expect = 0.001
Identities = 19/63 (30%), Positives = 31/63 (49%)
Frame = +1
Query: 202 TLTRGSTYRCVRSSN**HIMIWNAVIFGPHDTPFEDGTFKLTIEFTXXYPNKPPTVRFVS 381
TLTR V + ++ + + GP + +E G F L + YP PP VRF++
Sbjct: 13 TLTRDPPPGIVAAPTEDNLRYFKITMEGPQQSAYEGGKFHLELFLPDEYPMMPPNVRFLT 72
Query: 382 KMF 390
K++
Sbjct: 73 KIY 75
>SPCC777.10c |ubc12||ubiquitin conjugating enzyme
Ubc12|Schizosaccharomyces pombe|chr 3|||Manual
Length = 177
Score = 37.5 bits (83), Expect = 0.001
Identities = 13/32 (40%), Positives = 22/32 (68%)
Frame = +2
Query: 383 KCXHPNVYADGGICLDILQNRWSPTYXVSAIL 478
K HPN+ +G +CL+IL+ W+P +++IL
Sbjct: 92 KIYHPNIDIEGNVCLNILRQDWNPVLNLNSIL 123
Score = 30.7 bits (66), Expect = 0.14
Identities = 11/35 (31%), Positives = 21/35 (60%)
Frame = +1
Query: 286 PHDTPFEDGTFKLTIEFTXXYPNKPPTVRFVSKMF 390
P + ++ G FK I+ YP+ PP V+ ++K++
Sbjct: 60 PDEGYYKGGKFKFRIQIDDNYPHDPPKVKCLNKIY 94
>SPCC794.08 |||HEAT repeat protein, unknown biological
role|Schizosaccharomyces pombe|chr 3|||Manual
Length = 798
Score = 29.9 bits (64), Expect = 0.25
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = -2
Query: 122 FLLLSWSNFDTVIQKLCITNVRIKWTFL 39
FL S NFDT+++K IT+ + W F+
Sbjct: 497 FLRPSLINFDTILRKSAITSFSVLWDFI 524
>SPAC343.11c |msc1||multi-copy suppressor of Chk1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1588
Score = 27.5 bits (58), Expect = 1.3
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +1
Query: 85 ITVSKLLQLKSRKISLCYNLGIENQ 159
++ SKL QLKS S+C N G+ Q
Sbjct: 1022 LSTSKLFQLKSEANSICINRGLLEQ 1046
>SPAC27E2.02 |||IMPACT homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 280
Score = 26.6 bits (56), Expect = 2.3
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +1
Query: 307 DGTFKLTIEFTXXYPNKPPTV 369
D + +L I+F YPN PTV
Sbjct: 38 DSSVRLNIQFPLDYPNSAPTV 58
>SPAC30.01c |sec72|sec7b|Sec7 domain|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1822
Score = 25.0 bits (52), Expect = 7.0
Identities = 8/23 (34%), Positives = 18/23 (78%)
Frame = -2
Query: 101 NFDTVIQKLCITNVRIKWTFLCR 33
++DT++Q+ C+ ++ I +T LC+
Sbjct: 1336 HYDTLMQQNCLIDMLISFTELCK 1358
>SPBC947.15c |||NADH dehydrogenase|Schizosaccharomyces pombe|chr
2|||Manual
Length = 551
Score = 24.6 bits (51), Expect = 9.2
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = +2
Query: 185 LMRDFKRLQEDPPTGVSGAPTDNIL 259
L + +RL P G SG P NI+
Sbjct: 70 LFQSLRRLNNSSPKGKSGVPKKNIV 94
>SPBPB10D8.01 |||cysteine transporter |Schizosaccharomyces pombe|chr
2|||Manual
Length = 552
Score = 24.6 bits (51), Expect = 9.2
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = +1
Query: 313 TFKLTIEFTXXYPNKPPTVRFVSK 384
TF LTI YP+ T RF++K
Sbjct: 257 TFFLTIGLFFYYPDNTSTARFLTK 280
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,145,061
Number of Sequences: 5004
Number of extensions: 41317
Number of successful extensions: 109
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 93
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 109
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 216376042
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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