Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0672
(528 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_26407| Best HMM Match : UQ_con (HMM E-Value=0) 46 1e-05
SB_41378| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 4e-05
SB_44322| Best HMM Match : UQ_con (HMM E-Value=1.6e-37) 40 0.001
SB_36444| Best HMM Match : UQ_con (HMM E-Value=2.8) 40 0.002
SB_15708| Best HMM Match : UQ_con (HMM E-Value=0) 38 0.004
SB_5638| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.004
SB_33408| Best HMM Match : UQ_con (HMM E-Value=3.7e-07) 37 0.009
SB_7202| Best HMM Match : UQ_con (HMM E-Value=5.9e-05) 36 0.021
SB_33407| Best HMM Match : UQ_con (HMM E-Value=0) 36 0.021
SB_39170| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.027
SB_35256| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.027
SB_9528| Best HMM Match : 7tm_1 (HMM E-Value=2.6e-39) 35 0.036
SB_26761| Best HMM Match : UQ_con (HMM E-Value=1.7e-06) 35 0.048
SB_30411| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.083
SB_21041| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.11
SB_28696| Best HMM Match : UQ_con (HMM E-Value=5.3e-30) 33 0.15
SB_28812| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.19
SB_3717| Best HMM Match : UQ_con (HMM E-Value=0.00017) 33 0.19
SB_26077| Best HMM Match : UQ_con (HMM E-Value=6e-18) 31 0.78
SB_58837| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.2
>SB_26407| Best HMM Match : UQ_con (HMM E-Value=0)
Length = 1282
Score = 46.4 bits (105), Expect = 1e-05
Identities = 19/42 (45%), Positives = 25/42 (59%)
Frame = +1
Query: 265 WNAVIFGPHDTPFEDGTFKLTIEFTXXYPNKPPTVRFVSKMF 390
W+ IFGP T + G FK + F YP PPT RF++KM+
Sbjct: 1157 WDVAIFGPPGTLYAGGYFKAHMSFPHDYPYSPPTFRFLTKMW 1198
Score = 29.5 bits (63), Expect = 1.8
Identities = 16/45 (35%), Positives = 20/45 (44%), Gaps = 13/45 (28%)
Frame = +2
Query: 383 KCXHPNVYADGGICLDIL-------------QNRWSPTYXVSAIL 478
K HPN+Y G +C+ IL RW+PT V IL
Sbjct: 1196 KMWHPNIYESGDVCISILHPPVDDPQSGELPSERWNPTQNVRTIL 1240
>SB_41378| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 473
Score = 44.8 bits (101), Expect = 4e-05
Identities = 16/42 (38%), Positives = 27/42 (64%)
Frame = +1
Query: 265 WNAVIFGPHDTPFEDGTFKLTIEFTXXYPNKPPTVRFVSKMF 390
W ++ GP T +E+G FK ++ F YP +PPT+ F+S ++
Sbjct: 365 WEIMVVGPPGTYYEEGYFKASMVFPKEYPQRPPTLTFISDIW 406
>SB_44322| Best HMM Match : UQ_con (HMM E-Value=1.6e-37)
Length = 190
Score = 40.3 bits (90), Expect = 0.001
Identities = 16/38 (42%), Positives = 23/38 (60%)
Frame = +1
Query: 277 IFGPHDTPFEDGTFKLTIEFTXXYPNKPPTVRFVSKMF 390
+ G TP+ G FKL I+ YP +PP VRFV+ ++
Sbjct: 2 LIGAEGTPYHKGIFKLDIQIPERYPFEPPKVRFVTPIY 39
Score = 33.1 bits (72), Expect = 0.15
Identities = 16/45 (35%), Positives = 26/45 (57%), Gaps = 4/45 (8%)
Frame = +2
Query: 392 HPNVYADGGICLDIL----QNRWSPTYXVSAILTXYTVXIKVIQP 514
HPN+ + G ICLD L + W P +S++L+ T+ I + +P
Sbjct: 40 HPNIDSSGRICLDTLKMPPKGMWKPALNISSVLS--TILILMAEP 82
>SB_36444| Best HMM Match : UQ_con (HMM E-Value=2.8)
Length = 55
Score = 39.5 bits (88), Expect = 0.002
Identities = 16/37 (43%), Positives = 22/37 (59%)
Frame = +1
Query: 271 AVIFGPHDTPFEDGTFKLTIEFTXXYPNKPPTVRFVS 381
A++ GP DTP+ G F I F YPN PP V+ ++
Sbjct: 10 ALVTGPVDTPYSRGCFVFDIFFPGTYPNVPPLVKLIT 46
>SB_15708| Best HMM Match : UQ_con (HMM E-Value=0)
Length = 145
Score = 38.3 bits (85), Expect = 0.004
Identities = 16/46 (34%), Positives = 26/46 (56%)
Frame = +1
Query: 253 HIMIWNAVIFGPHDTPFEDGTFKLTIEFTXXYPNKPPTVRFVSKMF 390
+I+ W +I P P+ G F++ I F YP KPP + F +K++
Sbjct: 22 NILYWQGLIV-PEMPPYNKGAFRIEICFPAEYPFKPPKITFKTKIY 66
>SB_5638| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 151
Score = 38.3 bits (85), Expect = 0.004
Identities = 16/38 (42%), Positives = 23/38 (60%)
Frame = +1
Query: 268 NAVIFGPHDTPFEDGTFKLTIEFTXXYPNKPPTVRFVS 381
+A+I GP DTP+E G F I YP +PP V+ ++
Sbjct: 14 HALITGPFDTPYEGGFFYFLIRCPPDYPIRPPRVKLMT 51
>SB_33408| Best HMM Match : UQ_con (HMM E-Value=3.7e-07)
Length = 181
Score = 37.1 bits (82), Expect = 0.009
Identities = 16/35 (45%), Positives = 19/35 (54%)
Frame = +1
Query: 265 WNAVIFGPHDTPFEDGTFKLTIEFTXXYPNKPPTV 369
W + I GP + +E G F L I F YP KPP V
Sbjct: 54 WYSTILGPPGSVYEGGVFFLDIHFPTDYPFKPPKV 88
>SB_7202| Best HMM Match : UQ_con (HMM E-Value=5.9e-05)
Length = 200
Score = 35.9 bits (79), Expect = 0.021
Identities = 15/33 (45%), Positives = 18/33 (54%)
Frame = +1
Query: 265 WNAVIFGPHDTPFEDGTFKLTIEFTXXYPNKPP 363
W + I GP + +E G F L I F YP KPP
Sbjct: 167 WYSTILGPPGSVYEGGVFFLDIHFPSDYPFKPP 199
>SB_33407| Best HMM Match : UQ_con (HMM E-Value=0)
Length = 226
Score = 35.9 bits (79), Expect = 0.021
Identities = 15/33 (45%), Positives = 18/33 (54%)
Frame = +1
Query: 265 WNAVIFGPHDTPFEDGTFKLTIEFTXXYPNKPP 363
W + I GP + +E G F L I F YP KPP
Sbjct: 127 WYSTILGPPGSVYEGGVFFLDIHFPSDYPFKPP 159
Score = 32.3 bits (70), Expect = 0.25
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = +2
Query: 371 DLYQKCXHPNVYADGGICLDILQNRWSPTYXVSAIL 478
D++ +P G +CLDIL++ WSP +S +L
Sbjct: 147 DIHFPSDYPFKPPKGMVCLDILKDSWSPALTISKVL 182
>SB_39170| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 79
Score = 35.5 bits (78), Expect = 0.027
Identities = 16/31 (51%), Positives = 20/31 (64%)
Frame = +1
Query: 295 TPFEDGTFKLTIEFTXXYPNKPPTVRFVSKM 387
T FE+ + L I YP KPPTV+FVSK+
Sbjct: 1 TVFENRIYNLKIVCGPNYPQKPPTVKFVSKI 31
>SB_35256| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 41
Score = 35.5 bits (78), Expect = 0.027
Identities = 16/31 (51%), Positives = 20/31 (64%)
Frame = +1
Query: 295 TPFEDGTFKLTIEFTXXYPNKPPTVRFVSKM 387
T FE+ + L I YP KPPTV+FVSK+
Sbjct: 1 TVFENRIYNLKIVCGPNYPQKPPTVKFVSKI 31
>SB_9528| Best HMM Match : 7tm_1 (HMM E-Value=2.6e-39)
Length = 841
Score = 35.1 bits (77), Expect = 0.036
Identities = 15/29 (51%), Positives = 17/29 (58%)
Frame = +1
Query: 277 IFGPHDTPFEDGTFKLTIEFTXXYPNKPP 363
I GP +TPFE GT+ L I YP PP
Sbjct: 693 IRGPPETPFEGGTYNLDIVIPETYPFNPP 721
>SB_26761| Best HMM Match : UQ_con (HMM E-Value=1.7e-06)
Length = 739
Score = 34.7 bits (76), Expect = 0.048
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +1
Query: 262 IWNAVIFGPHDTPFEDGTFKLTIEFTXXYPNKPPTVRFVS 381
I+ +I GP TP++ G F I YP+ PP+ ++S
Sbjct: 635 IFRVMIEGPAGTPYDHGLFAFDILLPANYPDAPPSFHYLS 674
>SB_30411| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 710
Score = 33.9 bits (74), Expect = 0.083
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +1
Query: 280 FGPHDTPFEDGTFKLTIEFTXXYPNKPPTV 369
FGP TP+E G +K+ ++ YP K P++
Sbjct: 55 FGPVGTPYEGGVWKVRVDLPEKYPFKSPSI 84
>SB_21041| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 269
Score = 33.5 bits (73), Expect = 0.11
Identities = 14/45 (31%), Positives = 22/45 (48%)
Frame = +2
Query: 383 KCXHPNVYADGGICLDILQNRWSPTYXVSAILTXYTVXIKVIQPK 517
K HPNV +G IC++ L+ W P + +L + V P+
Sbjct: 150 KIFHPNVAKNGEICVNTLKKDWKPDLGIKQVLLTVKCLLIVPNPE 194
>SB_28696| Best HMM Match : UQ_con (HMM E-Value=5.3e-30)
Length = 204
Score = 33.1 bits (72), Expect = 0.15
Identities = 16/45 (35%), Positives = 26/45 (57%), Gaps = 4/45 (8%)
Frame = +2
Query: 392 HPNVYADGGICLDIL----QNRWSPTYXVSAILTXYTVXIKVIQP 514
HPN+ + G ICLD L + W P +S++L+ T+ I + +P
Sbjct: 54 HPNIDSSGRICLDTLKMPPKGMWKPALNISSVLS--TILILMAEP 96
>SB_28812| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 385
Score = 32.7 bits (71), Expect = 0.19
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = +1
Query: 265 WNAVIFGPHDTPFEDGTFKLTIEFTXXYPNKPPTVRFVS 381
W+ + GP DT F G + I YP KPP++ ++
Sbjct: 41 WHFTVRGPPDTEFAGGRYHGRIILPPEYPMKPPSIMLLT 79
>SB_3717| Best HMM Match : UQ_con (HMM E-Value=0.00017)
Length = 123
Score = 32.7 bits (71), Expect = 0.19
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = +1
Query: 265 WNAVIFGPHDTPFEDGTFKLTIEFTXXYPNKPPTVRFVS 381
W+ + GP DT F G + I YP KPP++ ++
Sbjct: 6 WHFTVRGPPDTEFAGGRYHGRIILPPEYPMKPPSIMLLT 44
>SB_26077| Best HMM Match : UQ_con (HMM E-Value=6e-18)
Length = 215
Score = 30.7 bits (66), Expect = 0.78
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +1
Query: 286 PHDTPFEDGTFKLTIEFTXXYPNKPPTVRFVSKMF 390
P D + G FK +++ T YPN PP R V+ ++
Sbjct: 45 PTDGAYRGGQFKFSVK-TEDYPNTPPVPRCVNNIY 78
>SB_58837| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 747
Score = 27.5 bits (58), Expect = 7.2
Identities = 17/63 (26%), Positives = 25/63 (39%), Gaps = 1/63 (1%)
Frame = +1
Query: 265 WNAVIFGPH-DTPFEDGTFKLTIEFTXXYPNKPPTVRFVSKMFXSKCLRRWWNLPRYPAK 441
W+AV F + D ++L YP P T+RF + R+ W P K
Sbjct: 568 WDAVAFDAAIEQAHPDDLWRLIEHHRKNYPRLPATIRFDPDPSVAHPYRKQWRPVTVPGK 627
Query: 442 QME 450
+ E
Sbjct: 628 RGE 630
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,531,429
Number of Sequences: 59808
Number of extensions: 291919
Number of successful extensions: 504
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 481
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 503
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1197191618
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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