Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0672
(528 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U08139-1|AAA83388.1| 192|Caenorhabditis elegans ubc-1 protein. 102 2e-22
AF045638-8|AAC02561.2| 192|Caenorhabditis elegans Ubiquitin con... 102 2e-22
Z68337-1|CAA92745.1| 147|Caenorhabditis elegans Hypothetical pr... 50 1e-06
S56051-1|AAB25489.2| 147|Caenorhabditis elegans ubiquitin-conju... 50 1e-06
Z22179-13|CAA80166.1| 164|Caenorhabditis elegans Hypothetical p... 49 2e-06
Z92834-2|CAB07383.1| 139|Caenorhabditis elegans Hypothetical pr... 46 1e-05
AC025726-12|AAK73914.3| 243|Caenorhabditis elegans Ubiquitin co... 46 2e-05
U41026-5|AAA82352.2| 546|Caenorhabditis elegans Ubiquitin conju... 42 2e-04
AC024817-43|AAK93865.2| 151|Caenorhabditis elegans Ubiquitin co... 42 4e-04
AL110500-10|CAB60431.1| 170|Caenorhabditis elegans Hypothetical... 41 5e-04
AF099919-11|AAC68796.1| 199|Caenorhabditis elegans Ubiquitin co... 40 0.001
U39674-4|AAA80414.2| 182|Caenorhabditis elegans Ubiquitin conju... 40 0.001
AC024876-5|AAF60891.2| 221|Caenorhabditis elegans Ubiquitin con... 39 0.002
U00035-7|AAA50648.2| 153|Caenorhabditis elegans Ubiquitin conju... 39 0.003
U40411-1|AAC47063.2| 679|Caenorhabditis elegans Ubiquitin conju... 37 0.008
AL032653-6|CAA21716.1| 152|Caenorhabditis elegans Hypothetical ... 37 0.010
U39674-5|AAA80415.2| 229|Caenorhabditis elegans Ubiquitin conju... 35 0.031
AC024747-1|AAO21404.1| 203|Caenorhabditis elegans Ubiquitin con... 34 0.072
U70849-3|AAK67232.1| 166|Caenorhabditis elegans Ubiquitin conju... 33 0.13
AF106565-1|AAC97374.1| 166|Caenorhabditis elegans ubiquitin-con... 33 0.13
AC024748-1|AAF60411.2| 218|Caenorhabditis elegans Ubiquitin con... 33 0.17
AF040645-12|AAB94978.2| 78|Caenorhabditis elegans Hypothetical... 30 0.89
Z81108-2|CAB03238.1| 180|Caenorhabditis elegans Hypothetical pr... 30 1.2
U23517-9|AAB93334.2| 314|Caenorhabditis elegans Ubiquitin conju... 30 1.2
U13644-3|AAB52677.1| 230|Caenorhabditis elegans Ubiquitin e2 (c... 28 3.6
Z78546-6|CAB54307.1| 642|Caenorhabditis elegans Hypothetical pr... 28 4.8
Z78545-5|CAB01764.2| 642|Caenorhabditis elegans Hypothetical pr... 28 4.8
Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical pr... 27 8.3
Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical pr... 27 8.3
Z36752-5|CAA85328.2| 533|Caenorhabditis elegans Hypothetical pr... 27 8.3
AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha... 27 8.3
AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha... 27 8.3
>U08139-1|AAA83388.1| 192|Caenorhabditis elegans ubc-1 protein.
Length = 192
Score = 102 bits (244), Expect = 2e-22
Identities = 57/111 (51%), Positives = 69/111 (62%), Gaps = 4/111 (3%)
Frame = +2
Query: 161 MSTPARRRLMRDFKRLQEDPPTGVSGAPTDNIL*SGML*YLALMI--LHLKMEHSNSQ*N 334
M+TP+RRRLMRDFK+LQEDPP GVSGAPT++ +L + A++ E + +
Sbjct: 1 MTTPSRRRLMRDFKKLQEDPPAGVSGAPTED----NILTWEAIIFGPQETPFEDGTFKLS 56
Query: 335 LXXXXXXXXXX--CDLYQKCXHPNVYADGGICLDILQNRWSPTYXVSAILT 481
L K HPNVYADG ICLDILQNRWSPTY V+AILT
Sbjct: 57 LEFTEEYPNKPPTVKFISKMFHPNVYADGSICLDILQNRWSPTYDVAAILT 107
Score = 84.6 bits (200), Expect = 4e-17
Identities = 33/46 (71%), Positives = 41/46 (89%)
Frame = +1
Query: 253 HIMIWNAVIFGPHDTPFEDGTFKLTIEFTXXYPNKPPTVRFVSKMF 390
+I+ W A+IFGP +TPFEDGTFKL++EFT YPNKPPTV+F+SKMF
Sbjct: 32 NILTWEAIIFGPQETPFEDGTFKLSLEFTEEYPNKPPTVKFISKMF 77
>AF045638-8|AAC02561.2| 192|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein1 protein.
Length = 192
Score = 102 bits (244), Expect = 2e-22
Identities = 57/111 (51%), Positives = 69/111 (62%), Gaps = 4/111 (3%)
Frame = +2
Query: 161 MSTPARRRLMRDFKRLQEDPPTGVSGAPTDNIL*SGML*YLALMI--LHLKMEHSNSQ*N 334
M+TP+RRRLMRDFK+LQEDPP GVSGAPT++ +L + A++ E + +
Sbjct: 1 MTTPSRRRLMRDFKKLQEDPPAGVSGAPTED----NILTWEAIIFGPQETPFEDGTFKLS 56
Query: 335 LXXXXXXXXXX--CDLYQKCXHPNVYADGGICLDILQNRWSPTYXVSAILT 481
L K HPNVYADG ICLDILQNRWSPTY V+AILT
Sbjct: 57 LEFTEEYPNKPPTVKFISKMFHPNVYADGSICLDILQNRWSPTYDVAAILT 107
Score = 84.6 bits (200), Expect = 4e-17
Identities = 33/46 (71%), Positives = 41/46 (89%)
Frame = +1
Query: 253 HIMIWNAVIFGPHDTPFEDGTFKLTIEFTXXYPNKPPTVRFVSKMF 390
+I+ W A+IFGP +TPFEDGTFKL++EFT YPNKPPTV+F+SKMF
Sbjct: 32 NILTWEAIIFGPQETPFEDGTFKLSLEFTEEYPNKPPTVKFISKMF 77
>Z68337-1|CAA92745.1| 147|Caenorhabditis elegans Hypothetical
protein M7.1 protein.
Length = 147
Score = 50.0 bits (114), Expect = 1e-06
Identities = 19/42 (45%), Positives = 27/42 (64%)
Frame = +1
Query: 265 WNAVIFGPHDTPFEDGTFKLTIEFTXXYPNKPPTVRFVSKMF 390
W A I GP ++P++ G F LTI F YP KPP V F ++++
Sbjct: 33 WQATIMGPPESPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIY 74
Score = 43.2 bits (97), Expect = 1e-04
Identities = 15/29 (51%), Positives = 23/29 (79%)
Frame = +2
Query: 392 HPNVYADGGICLDILQNRWSPTYXVSAIL 478
HPN+ ++G ICLDIL+++WSP +S +L
Sbjct: 75 HPNINSNGSICLDILRSQWSPALTISKVL 103
>S56051-1|AAB25489.2| 147|Caenorhabditis elegans
ubiquitin-conjugating enzyme protein.
Length = 147
Score = 50.0 bits (114), Expect = 1e-06
Identities = 19/42 (45%), Positives = 27/42 (64%)
Frame = +1
Query: 265 WNAVIFGPHDTPFEDGTFKLTIEFTXXYPNKPPTVRFVSKMF 390
W A I GP ++P++ G F LTI F YP KPP V F ++++
Sbjct: 33 WQATIMGPPESPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIY 74
Score = 43.2 bits (97), Expect = 1e-04
Identities = 15/29 (51%), Positives = 23/29 (79%)
Frame = +2
Query: 392 HPNVYADGGICLDILQNRWSPTYXVSAIL 478
HPN+ ++G ICLDIL+++WSP +S +L
Sbjct: 75 HPNINSNGSICLDILRSQWSPALTISKVL 103
>Z22179-13|CAA80166.1| 164|Caenorhabditis elegans Hypothetical
protein F58A4.10 protein.
Length = 164
Score = 49.2 bits (112), Expect = 2e-06
Identities = 17/42 (40%), Positives = 28/42 (66%)
Frame = +1
Query: 265 WNAVIFGPHDTPFEDGTFKLTIEFTXXYPNKPPTVRFVSKMF 390
W ++ GP DT +E G FK ++F YP KPP ++F+S+++
Sbjct: 36 WEVLVIGPPDTLYEGGFFKAILDFPRDYPQKPPKMKFISEIW 77
>Z92834-2|CAB07383.1| 139|Caenorhabditis elegans Hypothetical
protein F39B2.2 protein.
Length = 139
Score = 46.4 bits (105), Expect = 1e-05
Identities = 19/41 (46%), Positives = 25/41 (60%)
Frame = +1
Query: 265 WNAVIFGPHDTPFEDGTFKLTIEFTXXYPNKPPTVRFVSKM 387
W A I GP TP+E + L I+ YP +PPTVRF +K+
Sbjct: 41 WTASIIGPPRTPYESRIYNLQIQCGGNYPREPPTVRFTTKV 81
>AC025726-12|AAK73914.3| 243|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein3 protein.
Length = 243
Score = 45.6 bits (103), Expect = 2e-05
Identities = 16/46 (34%), Positives = 29/46 (63%)
Frame = +1
Query: 253 HIMIWNAVIFGPHDTPFEDGTFKLTIEFTXXYPNKPPTVRFVSKMF 390
++ +W I+GP T ++ G FK +I F YP PP+++F +K++
Sbjct: 38 NLFVWTVGIYGPPKTLYQGGYFKASIRFPSNYPYSPPSMKFTTKVW 83
Score = 30.3 bits (65), Expect = 0.89
Identities = 17/45 (37%), Positives = 22/45 (48%), Gaps = 13/45 (28%)
Frame = +2
Query: 383 KCXHPNVYADGGICLDILQN-------------RWSPTYXVSAIL 478
K HPNVY +G +C+ IL + RW+PT V IL
Sbjct: 81 KVWHPNVYENGDLCISILHSPIDDPQSGELACERWNPTQSVRTIL 125
>U41026-5|AAA82352.2| 546|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein23 protein.
Length = 546
Score = 42.3 bits (95), Expect = 2e-04
Identities = 17/39 (43%), Positives = 27/39 (69%)
Frame = +1
Query: 274 VIFGPHDTPFEDGTFKLTIEFTXXYPNKPPTVRFVSKMF 390
+I G +TP+E G F+L I+ YP K PTV+F++K++
Sbjct: 384 IIKGVEETPYEGGIFELDIKIGESYPFKAPTVKFITKIW 422
>AC024817-43|AAK93865.2| 151|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein13 protein.
Length = 151
Score = 41.5 bits (93), Expect = 4e-04
Identities = 17/42 (40%), Positives = 26/42 (61%)
Frame = +1
Query: 265 WNAVIFGPHDTPFEDGTFKLTIEFTXXYPNKPPTVRFVSKMF 390
++ +I GP D+PF G FKL + YP P VRF++K++
Sbjct: 36 FHVMIAGPDDSPFAGGVFKLELFLPEEYPMAAPKVRFMTKIY 77
Score = 39.9 bits (89), Expect = 0.001
Identities = 16/45 (35%), Positives = 24/45 (53%)
Frame = +2
Query: 383 KCXHPNVYADGGICLDILQNRWSPTYXVSAILTXYTVXIKVIQPK 517
K HPN+ G ICLDIL+++WSP + +L + P+
Sbjct: 75 KIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPE 119
>AL110500-10|CAB60431.1| 170|Caenorhabditis elegans Hypothetical
protein Y87G2A.9 protein.
Length = 170
Score = 41.1 bits (92), Expect = 5e-04
Identities = 17/42 (40%), Positives = 22/42 (52%)
Frame = +1
Query: 265 WNAVIFGPHDTPFEDGTFKLTIEFTXXYPNKPPTVRFVSKMF 390
W +I GP +T F +G F I F YP PP +RF +F
Sbjct: 37 WECLITGPEETCFANGVFPARITFPQDYPLSPPKMRFTCGIF 78
Score = 31.9 bits (69), Expect = 0.29
Identities = 26/96 (27%), Positives = 40/96 (41%), Gaps = 4/96 (4%)
Frame = +2
Query: 161 MSTPARRRLMRDFKRLQEDPPTGVSGAPTDNIL*SGML*YLALMILHLKMEHSNS--Q*N 334
M+ A +RLM ++K L PP G+ AP D + L+ + +N
Sbjct: 1 MAGYALKRLMTEYKELTTRPPEGIIAAPIDE---DNFFEWECLITGPEETCFANGVFPAR 57
Query: 335 LXXXXXXXXXXCDLYQKCX--HPNVYADGGICLDIL 436
+ + C HPN+YADG +C+ IL
Sbjct: 58 ITFPQDYPLSPPKMRFTCGIFHPNIYADGRVCISIL 93
>AF099919-11|AAC68796.1| 199|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein20 protein.
Length = 199
Score = 39.9 bits (89), Expect = 0.001
Identities = 17/38 (44%), Positives = 23/38 (60%)
Frame = +1
Query: 277 IFGPHDTPFEDGTFKLTIEFTXXYPNKPPTVRFVSKMF 390
I GP DTP+ G F L I+ YP PP V+F +K++
Sbjct: 43 IRGPPDTPYAGGMFDLDIKIPDQYPFSPPNVKFSTKIW 80
Score = 34.3 bits (75), Expect = 0.055
Identities = 16/46 (34%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = +2
Query: 383 KCXHPNVYADGG-ICLDILQNRWSPTYXVSAILTXYTVXIKVIQPK 517
K HPNV + G ICLDIL+++W+ + + +L + +PK
Sbjct: 78 KIWHPNVSSQTGVICLDILKDQWAASLTLRTVLLSIQALMCTPEPK 123
>U39674-4|AAA80414.2| 182|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein22 protein.
Length = 182
Score = 39.5 bits (88), Expect = 0.001
Identities = 15/33 (45%), Positives = 21/33 (63%)
Frame = +1
Query: 277 IFGPHDTPFEDGTFKLTIEFTXXYPNKPPTVRF 375
I GP DTP+E G F++ + F YPN P ++F
Sbjct: 35 IAGPADTPYETGVFEVDLTFPDNYPNALPQIKF 67
>AC024876-5|AAF60891.2| 221|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein8 protein.
Length = 221
Score = 39.1 bits (87), Expect = 0.002
Identities = 13/36 (36%), Positives = 25/36 (69%)
Frame = +1
Query: 283 GPHDTPFEDGTFKLTIEFTXXYPNKPPTVRFVSKMF 390
GP DT +E+G +++ ++ YP K P++ F++K+F
Sbjct: 41 GPKDTAYENGVWRIRVDMPDKYPFKSPSIGFLNKIF 76
>U00035-7|AAA50648.2| 153|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein18 protein.
Length = 153
Score = 38.7 bits (86), Expect = 0.003
Identities = 16/46 (34%), Positives = 26/46 (56%)
Frame = +1
Query: 253 HIMIWNAVIFGPHDTPFEDGTFKLTIEFTXXYPNKPPTVRFVSKMF 390
+++ W ++ P P+ G FK+ I F YP KPP V F +K++
Sbjct: 31 NLLKWTVLLI-PDKEPYNKGAFKVGITFPVDYPFKPPKVAFETKIY 75
>U40411-1|AAC47063.2| 679|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein17 protein.
Length = 679
Score = 37.1 bits (82), Expect = 0.008
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = +1
Query: 262 IWNAVIFGPHDTPFEDGTFKLTIEFTXXYPNKPPTVRFVS 381
I +I GP DTP+ +G F+ I F YP PP F++
Sbjct: 444 IIKVLISGPDDTPYANGLFEFDIFFPTGYPFSPPKCAFLT 483
>AL032653-6|CAA21716.1| 152|Caenorhabditis elegans Hypothetical
protein Y54E5B.4 protein.
Length = 152
Score = 36.7 bits (81), Expect = 0.010
Identities = 12/28 (42%), Positives = 20/28 (71%)
Frame = +2
Query: 392 HPNVYADGGICLDILQNRWSPTYXVSAI 475
HP++Y++G ICL IL + W+P V ++
Sbjct: 82 HPHIYSNGHICLSILSDDWTPALSVQSV 109
>U39674-5|AAA80415.2| 229|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein21 protein.
Length = 229
Score = 35.1 bits (77), Expect = 0.031
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = +1
Query: 253 HIMIWNAVIFGPHDTPFEDGTFKLTIEFTXXYPNKPPTV 369
++M I GP TP+ GTF++ ++ YP +PP V
Sbjct: 49 NLMDIKGFIKGPEGTPYAGGTFEIKVDIPEHYPFEPPKV 87
Score = 31.5 bits (68), Expect = 0.39
Identities = 12/30 (40%), Positives = 21/30 (70%), Gaps = 1/30 (3%)
Frame = +2
Query: 392 HPNVYADGG-ICLDILQNRWSPTYXVSAIL 478
HPN+ + G ICLDIL+++W+ + + +L
Sbjct: 110 HPNISSQTGTICLDILKDKWTASLTLRTVL 139
>AC024747-1|AAO21404.1| 203|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein26 protein.
Length = 203
Score = 33.9 bits (74), Expect = 0.072
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = +1
Query: 253 HIMIWNAVIFGPHDTPFEDGTFKLTIEFTXXYPNKPPTV 369
+I+ W +I G TP+E G + + F +P KPP +
Sbjct: 36 NILEWRYIIIGAPKTPYEGGIYMGKLLFPKDFPFKPPAI 74
>U70849-3|AAK67232.1| 166|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein9 protein.
Length = 166
Score = 33.1 bits (72), Expect = 0.13
Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
Frame = +2
Query: 368 CDLYQKCXHPNVYADGGICLDIL-QNR-WSPTYXVSAIL 478
C HPNVY G +CL +L +N+ W P+ + +L
Sbjct: 75 CKFEPPLFHPNVYPSGTVCLSLLDENKDWKPSISIKQLL 113
>AF106565-1|AAC97374.1| 166|Caenorhabditis elegans
ubiquitin-conjugating enzyme 9homolog protein.
Length = 166
Score = 33.1 bits (72), Expect = 0.13
Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
Frame = +2
Query: 368 CDLYQKCXHPNVYADGGICLDIL-QNR-WSPTYXVSAIL 478
C HPNVY G +CL +L +N+ W P+ + +L
Sbjct: 75 CKFEPPLFHPNVYPSGTVCLSLLDENKDWKPSISIKQLL 113
>AC024748-1|AAF60411.2| 218|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein15 protein.
Length = 218
Score = 32.7 bits (71), Expect = 0.17
Identities = 15/33 (45%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Frame = +2
Query: 164 STPARRRLMRDFKRLQEDPPTGVSGAPT-DNIL 259
S+ A RRL +D+ +L +DP G+ P DNIL
Sbjct: 17 SSSAVRRLQKDYAKLMQDPVDGIKALPNEDNIL 49
Score = 29.9 bits (64), Expect = 1.2
Identities = 12/43 (27%), Positives = 22/43 (51%)
Frame = +1
Query: 253 HIMIWNAVIFGPHDTPFEDGTFKLTIEFTXXYPNKPPTVRFVS 381
+I+ W+ + G DTPF G + + F +P PP + ++
Sbjct: 47 NILEWHYCLRGSPDTPFYGGYYWGKVIFKENFPWSPPAITMIT 89
>AF040645-12|AAB94978.2| 78|Caenorhabditis elegans Hypothetical
protein F52C6.12 protein.
Length = 78
Score = 30.3 bits (65), Expect = 0.89
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = +1
Query: 265 WNAVIFGPHDTPFEDGTFKLTI 330
W A I GP ++P++ G F LTI
Sbjct: 33 WQATIMGPPESPYQGGIFFLTI 54
>Z81108-2|CAB03238.1| 180|Caenorhabditis elegans Hypothetical
protein R09B3.4 protein.
Length = 180
Score = 29.9 bits (64), Expect = 1.2
Identities = 15/38 (39%), Positives = 20/38 (52%), Gaps = 6/38 (15%)
Frame = +2
Query: 383 KCXHPNVYADGGICLDIL------QNRWSPTYXVSAIL 478
K HPN+ DG ICL IL Q W PT ++ ++
Sbjct: 99 KVWHPNINEDGSICLSILRQNSLDQYGWRPTRNLTDVV 136
>U23517-9|AAB93334.2| 314|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein6 protein.
Length = 314
Score = 29.9 bits (64), Expect = 1.2
Identities = 14/35 (40%), Positives = 17/35 (48%)
Frame = +1
Query: 265 WNAVIFGPHDTPFEDGTFKLTIEFTXXYPNKPPTV 369
W+ I G T FE G + I F YP KPP +
Sbjct: 41 WHFTIRGTLGTDFEGGIYHGRIIFPADYPMKPPNL 75
>U13644-3|AAB52677.1| 230|Caenorhabditis elegans Ubiquitin e2
(conjugating enzyme)variant protein 2 protein.
Length = 230
Score = 28.3 bits (60), Expect = 3.6
Identities = 11/37 (29%), Positives = 20/37 (54%)
Frame = +1
Query: 265 WNAVIFGPHDTPFEDGTFKLTIEFTXXYPNKPPTVRF 375
W + GP +P+E G +++++ F +P PP F
Sbjct: 71 WICTVPGPRGSPWEGGEYEVSVNF-HKWPIIPPICEF 106
>Z78546-6|CAB54307.1| 642|Caenorhabditis elegans Hypothetical
protein M03B6.3 protein.
Length = 642
Score = 27.9 bits (59), Expect = 4.8
Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 2/63 (3%)
Frame = +1
Query: 268 NAVIFG-PHDTPFEDGTFKLTIEFTXXYPNKPPTVRFVSKMFXSKCLRRWWNLPRYPAK- 441
N FG P D P +GT K +F + ++PPT + +M+ + W+ RY K
Sbjct: 90 NKTDFGTPLDLPGMNGTSKAAFKFLDAFTSQPPTTK-AKEMYVDGVKVKDWD--RYARKF 146
Query: 442 QME 450
Q+E
Sbjct: 147 QLE 149
>Z78545-5|CAB01764.2| 642|Caenorhabditis elegans Hypothetical
protein M03B6.3 protein.
Length = 642
Score = 27.9 bits (59), Expect = 4.8
Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 2/63 (3%)
Frame = +1
Query: 268 NAVIFG-PHDTPFEDGTFKLTIEFTXXYPNKPPTVRFVSKMFXSKCLRRWWNLPRYPAK- 441
N FG P D P +GT K +F + ++PPT + +M+ + W+ RY K
Sbjct: 90 NKTDFGTPLDLPGMNGTSKAAFKFLDAFTSQPPTTK-AKEMYVDGVKVKDWD--RYARKF 146
Query: 442 QME 450
Q+E
Sbjct: 147 QLE 149
>Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical
protein K08C7.3b protein.
Length = 3672
Score = 27.1 bits (57), Expect = 8.3
Identities = 10/41 (24%), Positives = 21/41 (51%)
Frame = +3
Query: 324 HNRIYXRXSK*TPNSAICIKNVXIQMFTPMVESA*ISCKTD 446
H + Y N+A C++ ++ +P+ E ++C+TD
Sbjct: 175 HGKTYQPWFNFAENAAECMRRFGMESLSPISEDDSVTCRTD 215
>Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical
protein K08C7.3a protein.
Length = 3704
Score = 27.1 bits (57), Expect = 8.3
Identities = 10/41 (24%), Positives = 21/41 (51%)
Frame = +3
Query: 324 HNRIYXRXSK*TPNSAICIKNVXIQMFTPMVESA*ISCKTD 446
H + Y N+A C++ ++ +P+ E ++C+TD
Sbjct: 175 HGKTYQPWFNFAENAAECMRRFGMESLSPISEDDSVTCRTD 215
>Z36752-5|CAA85328.2| 533|Caenorhabditis elegans Hypothetical
protein F35H8.6 protein.
Length = 533
Score = 27.1 bits (57), Expect = 8.3
Identities = 16/47 (34%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Frame = -3
Query: 199 KIPHQASSCWS*HFDF-QYLSYNTMRFFYF*VGVTLTPLYKNYVLRT 62
++PH S + H +F QY + + FF+F + TL+ +Y Y +RT
Sbjct: 465 EVPHARSG--ADHLNFLQYFLVDVIAFFFFVIFCTLSIIY--YTIRT 507
>AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha
chain protein.
Length = 3704
Score = 27.1 bits (57), Expect = 8.3
Identities = 10/41 (24%), Positives = 21/41 (51%)
Frame = +3
Query: 324 HNRIYXRXSK*TPNSAICIKNVXIQMFTPMVESA*ISCKTD 446
H + Y N+A C++ ++ +P+ E ++C+TD
Sbjct: 175 HGKTYQPWFNFAENAAECMRRFGMESLSPISEDDSVTCRTD 215
>AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha
protein.
Length = 3704
Score = 27.1 bits (57), Expect = 8.3
Identities = 10/41 (24%), Positives = 21/41 (51%)
Frame = +3
Query: 324 HNRIYXRXSK*TPNSAICIKNVXIQMFTPMVESA*ISCKTD 446
H + Y N+A C++ ++ +P+ E ++C+TD
Sbjct: 175 HGKTYQPWFNFAENAAECMRRFGMESLSPISEDDSVTCRTD 215
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,794,110
Number of Sequences: 27780
Number of extensions: 234645
Number of successful extensions: 473
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 446
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 473
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1038911524
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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