Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0672
(528 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g02760.1 68415.m00219 ubiquitin-conjugating enzyme 2 (UBC2) E... 94 5e-20
At1g14400.2 68414.m01708 ubiquitin-conjugating enzyme 1 (UBC1) E... 94 5e-20
At1g14400.1 68414.m01707 ubiquitin-conjugating enzyme 1 (UBC1) E... 94 5e-20
At5g62540.1 68418.m07849 ubiquitin-conjugating enzyme 3 (UBC3) E... 89 1e-18
At3g08700.1 68416.m01011 ubiquitin-conjugating enzyme, putative ... 56 2e-08
At5g25760.1 68418.m03057 ubiquitin-conjugating enzyme, putative ... 52 2e-07
At5g59300.1 68418.m07430 ubiquitin-conjugating enzyme 7 (UBC7) E... 52 3e-07
At4g27960.2 68417.m04012 ubiquitin-conjugating enzyme E2-17 kDa ... 52 3e-07
At4g27960.1 68417.m04011 ubiquitin-conjugating enzyme E2-17 kDa ... 52 3e-07
At1g64230.1 68414.m07276 ubiquitin-conjugating enzyme, putative ... 52 3e-07
At5g56150.2 68418.m07005 ubiquitin-conjugating enzyme, putative ... 51 6e-07
At5g56150.1 68418.m07004 ubiquitin-conjugating enzyme, putative ... 51 6e-07
At2g16740.1 68415.m01920 ubiquitin-conjugating enzyme, putative ... 51 6e-07
At5g53300.2 68418.m06625 ubiquitin-conjugating enzyme 10 (UBC10)... 50 1e-06
At5g53300.1 68418.m06624 ubiquitin-conjugating enzyme 10 (UBC10)... 50 1e-06
At5g41700.4 68418.m05071 ubiquitin-conjugating enzyme 8 (UBC8) E... 50 1e-06
At5g41700.3 68418.m05068 ubiquitin-conjugating enzyme 8 (UBC8) E... 50 1e-06
At5g41700.2 68418.m05070 ubiquitin-conjugating enzyme 8 (UBC8) E... 50 1e-06
At5g41700.1 68418.m05069 ubiquitin-conjugating enzyme 8 (UBC8) E... 50 1e-06
At3g46460.1 68416.m05037 ubiquitin-conjugating enzyme 13 (UBC13)... 50 1e-06
At1g36340.1 68414.m04516 ubiquitin-conjugating enzyme family pro... 50 1e-06
At3g08690.1 68416.m01010 ubiquitin-conjugating enzyme 11 (UBC11)... 47 9e-06
At3g55380.1 68416.m06151 ubiquitin-conjugating enzyme 14 (UBC14)... 46 2e-05
At1g50490.1 68414.m05662 ubiquitin-conjugating enzyme 20 (UBC20)... 46 2e-05
At3g20060.1 68416.m02537 ubiquitin-conjugating enzyme 19 (UBC19)... 45 3e-05
At1g70660.1 68414.m08146 ubiquitin-conjugating enzyme family pro... 45 4e-05
At3g57870.1 68416.m06451 ubiquitin-conjugating enzyme, putative ... 44 5e-05
At3g13550.1 68416.m01703 ubiquitin-conjugating enzyme (COP10) id... 44 6e-05
At3g52560.1 68416.m05784 ubiquitin-conjugating enzyme family pro... 44 8e-05
At2g36060.1 68415.m04427 ubiquitin-conjugating enzyme family pro... 44 8e-05
At1g78870.1 68414.m09193 ubiquitin-conjugating enzyme, putative ... 44 8e-05
At1g75440.1 68414.m08763 ubiquitin-conjugating enzyme 16 (UBC16)... 44 8e-05
At2g32790.1 68415.m04014 ubiquitin-conjugating enzyme, putative ... 43 1e-04
At1g78870.2 68414.m09194 ubiquitin-conjugating enzyme, putative ... 43 1e-04
At1g16890.2 68414.m02044 ubiquitin-conjugating enzyme, putative ... 43 1e-04
At1g16890.1 68414.m02043 ubiquitin-conjugating enzyme, putative ... 43 1e-04
At5g42990.1 68418.m05243 ubiquitin-conjugating enzyme 18 (UBC18)... 42 3e-04
At4g36410.1 68417.m05173 ubiquitin-conjugating enzyme 17 (UBC17)... 41 6e-04
At1g45050.1 68414.m05165 ubiquitin-conjugating enzyme 15 (UBC15)... 41 6e-04
At3g52560.2 68416.m05785 ubiquitin-conjugating enzyme family pro... 40 0.001
At2g36060.2 68415.m04428 ubiquitin-conjugating enzyme family pro... 40 0.001
At1g23260.1 68414.m02910 ubiquitin-conjugating enzyme family pro... 40 0.001
At5g50870.1 68418.m06304 ubiquitin-conjugating enzyme, putative ... 40 0.001
At1g53020.1 68414.m06002 ubiquitin-conjugating enzyme family pro... 40 0.001
At1g63800.1 68414.m07220 ubiquitin-conjugating enzyme 5 (UBC5) E... 39 0.002
At5g05080.1 68418.m00539 ubiquitin-conjugating enzyme, putative ... 38 0.003
At3g24515.1 68416.m03077 ubiquitin-conjugating enzyme, putative ... 38 0.004
At2g46030.1 68415.m05726 ubiquitin-conjugating enzyme 6 (UBC6) E... 38 0.004
At5g41340.1 68418.m05024 ubiquitin-conjugating enzyme 4 (UBC4) E... 38 0.006
At3g15355.1 68416.m01945 ubiquitin-conjugating enzyme-related si... 38 0.006
At2g18600.1 68415.m02166 RUB1-conjugating enzyme, putative stron... 36 0.013
At3g17000.1 68416.m02171 ubiquitin-conjugating enzyme, putative ... 36 0.017
At5g50430.1 68418.m06245 ubiquitin-conjugating enzyme, putative ... 35 0.039
At1g17280.1 68414.m02105 ubiquitin-conjugating enzyme, putative ... 35 0.039
At2g33770.1 68415.m04141 ubiquitin-conjugating enzyme family pro... 33 0.16
At2g16920.1 68415.m01949 ubiquitin-conjugating enzyme family pro... 33 0.16
At3g60650.1 68416.m06786 expressed protein 28 3.4
At5g31685.1 68418.m03766 expressed protein ; expression supporte... 27 7.8
At2g14080.1 68415.m01566 disease resistance protein (TIR-NBS-LRR... 27 7.8
>At2g02760.1 68415.m00219 ubiquitin-conjugating enzyme 2 (UBC2) E2;
identical to gi:2689242, SP:P42745
Length = 152
Score = 94.3 bits (224), Expect = 5e-20
Identities = 52/111 (46%), Positives = 64/111 (57%), Gaps = 4/111 (3%)
Frame = +2
Query: 161 MSTPARRRLMRDFKRLQEDPPTGVSGAPTDNIL*SGML*YLALMILHLKMEHSNSQ*NL- 337
MSTPAR+RLMRDFKRLQ+DPP G+SGAP DN ++ + A++ L
Sbjct: 1 MSTPARKRLMRDFKRLQQDPPAGISGAPQDN----NIMLWNAVIFGPDDTPWDGGTFKLS 56
Query: 338 ---XXXXXXXXXXCDLYQKCXHPNVYADGGICLDILQNRWSPTYXVSAILT 481
+ HPN+YADG ICLDILQN+WSP Y V+AILT
Sbjct: 57 LQFSEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILT 107
Score = 82.6 bits (195), Expect = 1e-16
Identities = 33/46 (71%), Positives = 42/46 (91%)
Frame = +1
Query: 253 HIMIWNAVIFGPHDTPFEDGTFKLTIEFTXXYPNKPPTVRFVSKMF 390
+IM+WNAVIFGP DTP++ GTFKL+++F+ YPNKPPTVRFVS+MF
Sbjct: 32 NIMLWNAVIFGPDDTPWDGGTFKLSLQFSEDYPNKPPTVRFVSRMF 77
>At1g14400.2 68414.m01708 ubiquitin-conjugating enzyme 1 (UBC1) E2;
identical to gi:431259, SP:P25865
Length = 152
Score = 94.3 bits (224), Expect = 5e-20
Identities = 52/111 (46%), Positives = 64/111 (57%), Gaps = 4/111 (3%)
Frame = +2
Query: 161 MSTPARRRLMRDFKRLQEDPPTGVSGAPTDNIL*SGML*YLALMILHLKMEHSNSQ*NL- 337
MSTPAR+RLMRDFKRLQ+DPP G+SGAP DN ++ + A++ L
Sbjct: 1 MSTPARKRLMRDFKRLQQDPPAGISGAPQDN----NIMLWNAVIFGPDDTPWDGGTFKLS 56
Query: 338 ---XXXXXXXXXXCDLYQKCXHPNVYADGGICLDILQNRWSPTYXVSAILT 481
+ HPN+YADG ICLDILQN+WSP Y V+AILT
Sbjct: 57 LQFSEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILT 107
Score = 82.6 bits (195), Expect = 1e-16
Identities = 33/46 (71%), Positives = 42/46 (91%)
Frame = +1
Query: 253 HIMIWNAVIFGPHDTPFEDGTFKLTIEFTXXYPNKPPTVRFVSKMF 390
+IM+WNAVIFGP DTP++ GTFKL+++F+ YPNKPPTVRFVS+MF
Sbjct: 32 NIMLWNAVIFGPDDTPWDGGTFKLSLQFSEDYPNKPPTVRFVSRMF 77
>At1g14400.1 68414.m01707 ubiquitin-conjugating enzyme 1 (UBC1) E2;
identical to gi:431259, SP:P25865
Length = 152
Score = 94.3 bits (224), Expect = 5e-20
Identities = 52/111 (46%), Positives = 64/111 (57%), Gaps = 4/111 (3%)
Frame = +2
Query: 161 MSTPARRRLMRDFKRLQEDPPTGVSGAPTDNIL*SGML*YLALMILHLKMEHSNSQ*NL- 337
MSTPAR+RLMRDFKRLQ+DPP G+SGAP DN ++ + A++ L
Sbjct: 1 MSTPARKRLMRDFKRLQQDPPAGISGAPQDN----NIMLWNAVIFGPDDTPWDGGTFKLS 56
Query: 338 ---XXXXXXXXXXCDLYQKCXHPNVYADGGICLDILQNRWSPTYXVSAILT 481
+ HPN+YADG ICLDILQN+WSP Y V+AILT
Sbjct: 57 LQFSEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILT 107
Score = 82.6 bits (195), Expect = 1e-16
Identities = 33/46 (71%), Positives = 42/46 (91%)
Frame = +1
Query: 253 HIMIWNAVIFGPHDTPFEDGTFKLTIEFTXXYPNKPPTVRFVSKMF 390
+IM+WNAVIFGP DTP++ GTFKL+++F+ YPNKPPTVRFVS+MF
Sbjct: 32 NIMLWNAVIFGPDDTPWDGGTFKLSLQFSEDYPNKPPTVRFVSRMF 77
>At5g62540.1 68418.m07849 ubiquitin-conjugating enzyme 3 (UBC3) E2;
identical to gi:431261, SP:P42746
Length = 150
Score = 89.4 bits (212), Expect = 1e-18
Identities = 49/111 (44%), Positives = 63/111 (56%), Gaps = 4/111 (3%)
Frame = +2
Query: 161 MSTPARRRLMRDFKRLQEDPPTGVSGAPTDNIL*SGML*YLALMILHLKMEHSNSQ*NLX 340
M+TPA++RLM DFKRLQ+DPP G+SGAP DN ++ + AL+ L
Sbjct: 1 MTTPAKKRLMWDFKRLQKDPPVGISGAPQDN----NIMHWNALIFGPEDTPWDGGTFKLT 56
Query: 341 XXXXXXXXX----CDLYQKCXHPNVYADGGICLDILQNRWSPTYXVSAILT 481
+ HPN+YADG ICLDILQN+WSP Y V+A+LT
Sbjct: 57 LHFTEDYPNKPPIVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAVLT 107
Score = 79.8 bits (188), Expect = 1e-15
Identities = 33/46 (71%), Positives = 39/46 (84%)
Frame = +1
Query: 253 HIMIWNAVIFGPHDTPFEDGTFKLTIEFTXXYPNKPPTVRFVSKMF 390
+IM WNA+IFGP DTP++ GTFKLT+ FT YPNKPP VRFVS+MF
Sbjct: 32 NIMHWNALIFGPEDTPWDGGTFKLTLHFTEDYPNKPPIVRFVSRMF 77
>At3g08700.1 68416.m01011 ubiquitin-conjugating enzyme, putative
strong similar to ubiquitin-conjugating enzymes E2-17
from [Arabidopsis thaliana] SP|P35134, SP|P35132,
SP|P35133; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 149
Score = 55.6 bits (128), Expect = 2e-08
Identities = 21/45 (46%), Positives = 30/45 (66%)
Frame = +1
Query: 256 IMIWNAVIFGPHDTPFEDGTFKLTIEFTXXYPNKPPTVRFVSKMF 390
I W A I GPHD+P+ G F ++I+F+ YP KPP V F +K++
Sbjct: 31 IFHWQATIMGPHDSPYSGGVFTVSIDFSSDYPFKPPKVNFKTKVY 75
Score = 40.7 bits (91), Expect = 6e-04
Identities = 16/32 (50%), Positives = 21/32 (65%)
Frame = +2
Query: 383 KCXHPNVYADGGICLDILQNRWSPTYXVSAIL 478
K HPN+ + G ICLDIL+ +WSP S +L
Sbjct: 73 KVYHPNIDSKGSICLDILKEQWSPAPTTSKVL 104
>At5g25760.1 68418.m03057 ubiquitin-conjugating enzyme, putative
similar to SP|O60015 Ubiquitin-conjugating enzyme E2-21
kDa (EC 6.3.2.19) (Ubiquitin-protein ligase) (Ubiquitin
carrier protein) {Pichia angusta}; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 157
Score = 52.0 bits (119), Expect = 2e-07
Identities = 21/46 (45%), Positives = 30/46 (65%)
Frame = +1
Query: 253 HIMIWNAVIFGPHDTPFEDGTFKLTIEFTXXYPNKPPTVRFVSKMF 390
+I W A+I GP +TP+E G F+L YP +PP VRF++K+F
Sbjct: 33 NIFKWTALIKGPSETPYEGGVFQLAFSVPEPYPLQPPQVRFLTKIF 78
Score = 39.1 bits (87), Expect = 0.002
Identities = 16/32 (50%), Positives = 22/32 (68%), Gaps = 1/32 (3%)
Frame = +2
Query: 383 KCXHPNV-YADGGICLDILQNRWSPTYXVSAI 475
K HPNV + G ICLDIL+N WSP + + ++
Sbjct: 76 KIFHPNVHFKTGEICLDILKNAWSPAWTLQSV 107
>At5g59300.1 68418.m07430 ubiquitin-conjugating enzyme 7 (UBC7) E2;
identical to gi:992703, SP:P42747
Length = 198
Score = 51.6 bits (118), Expect = 3e-07
Identities = 22/46 (47%), Positives = 27/46 (58%)
Frame = +1
Query: 253 HIMIWNAVIFGPHDTPFEDGTFKLTIEFTXXYPNKPPTVRFVSKMF 390
+I W+ I GP DT +E G F + F YPN PPTVRF S M+
Sbjct: 65 NIFEWSVTIIGPPDTLYEGGFFNAIMTFPQNYPNSPPTVRFTSDMW 110
Score = 30.7 bits (66), Expect = 0.63
Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 13/42 (30%)
Frame = +2
Query: 392 HPNVYADGGICLDIL-------------QNRWSPTYXVSAIL 478
HPNVY+DG +C+ IL RW+P + V +I+
Sbjct: 111 HPNVYSDGRVCISILHPPGDDPSGYELASERWTPVHTVESIM 152
>At4g27960.2 68417.m04012 ubiquitin-conjugating enzyme E2-17 kDa 9
(UBC9) E2; identical to gi:297883, SP:P35132; identical
to cDNA UBC9 for ubiquitin conjugating enzyme homolog
GI:297883
Length = 178
Score = 51.6 bits (118), Expect = 3e-07
Identities = 21/42 (50%), Positives = 26/42 (61%)
Frame = +1
Query: 265 WNAVIFGPHDTPFEDGTFKLTIEFTXXYPNKPPTVRFVSKMF 390
W A I GP D+P+ G F +TI F YP KPP V F +K+F
Sbjct: 63 WQATIMGPSDSPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVF 104
Score = 48.0 bits (109), Expect = 4e-06
Identities = 30/106 (28%), Positives = 48/106 (45%), Gaps = 4/106 (3%)
Frame = +2
Query: 173 ARRRLMRDFKRLQEDPPTGVSGAPTDNIL*SGML*YLALMILHLKMEHSNS----Q*NLX 340
A +R++++ K LQ+DPPT S P M + A ++ +S +
Sbjct: 32 ASKRILKELKDLQKDPPTSCSAGPVAE----DMFHWQATIMGPSDSPYSGGVFLVTIHFP 87
Query: 341 XXXXXXXXXCDLYQKCXHPNVYADGGICLDILQNRWSPTYXVSAIL 478
K HPN+ ++G ICLDIL+ +WSP +S +L
Sbjct: 88 PDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVL 133
>At4g27960.1 68417.m04011 ubiquitin-conjugating enzyme E2-17 kDa 9
(UBC9) E2; identical to gi:297883, SP:P35132; identical
to cDNA UBC9 for ubiquitin conjugating enzyme homolog
GI:297883
Length = 148
Score = 51.6 bits (118), Expect = 3e-07
Identities = 21/42 (50%), Positives = 26/42 (61%)
Frame = +1
Query: 265 WNAVIFGPHDTPFEDGTFKLTIEFTXXYPNKPPTVRFVSKMF 390
W A I GP D+P+ G F +TI F YP KPP V F +K+F
Sbjct: 33 WQATIMGPSDSPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVF 74
Score = 48.0 bits (109), Expect = 4e-06
Identities = 30/106 (28%), Positives = 48/106 (45%), Gaps = 4/106 (3%)
Frame = +2
Query: 173 ARRRLMRDFKRLQEDPPTGVSGAPTDNIL*SGML*YLALMILHLKMEHSNS----Q*NLX 340
A +R++++ K LQ+DPPT S P M + A ++ +S +
Sbjct: 2 ASKRILKELKDLQKDPPTSCSAGPVAE----DMFHWQATIMGPSDSPYSGGVFLVTIHFP 57
Query: 341 XXXXXXXXXCDLYQKCXHPNVYADGGICLDILQNRWSPTYXVSAIL 478
K HPN+ ++G ICLDIL+ +WSP +S +L
Sbjct: 58 PDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVL 103
>At1g64230.1 68414.m07276 ubiquitin-conjugating enzyme, putative
identical or nearly so to Ubiquitin-conjugating enzymes
SP|P35132, SP|P35131, SP|P35133 from {Arabidopsis
thaliana}; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 148
Score = 51.6 bits (118), Expect = 3e-07
Identities = 21/42 (50%), Positives = 26/42 (61%)
Frame = +1
Query: 265 WNAVIFGPHDTPFEDGTFKLTIEFTXXYPNKPPTVRFVSKMF 390
W A I GP D+P+ G F +TI F YP KPP V F +K+F
Sbjct: 33 WQATIMGPSDSPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVF 74
Score = 48.4 bits (110), Expect = 3e-06
Identities = 31/106 (29%), Positives = 48/106 (45%), Gaps = 4/106 (3%)
Frame = +2
Query: 173 ARRRLMRDFKRLQEDPPTGVSGAPTDNIL*SGML*YLALMILHLKMEHSNS----Q*NLX 340
A +R++++ K LQ+DPPT S P M + A ++ +S +
Sbjct: 2 ASKRILKELKDLQKDPPTSCSAGPVAE----DMFHWQATIMGPSDSPYSGGVFLVTIHFP 57
Query: 341 XXXXXXXXXCDLYQKCXHPNVYADGGICLDILQNRWSPTYXVSAIL 478
K HPNV ++G ICLDIL+ +WSP +S +L
Sbjct: 58 PDYPFKPPKVAFRTKVFHPNVNSNGSICLDILKEQWSPALTISKVL 103
>At5g56150.2 68418.m07005 ubiquitin-conjugating enzyme, putative
strong similarity to ubiquitin-conjugating enzyme UBC2
[Mesembryanthemum crystallinum] GI:5762457, UBC4 [Pisum
sativum] GI:456568; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 148
Score = 50.8 bits (116), Expect = 6e-07
Identities = 21/42 (50%), Positives = 26/42 (61%)
Frame = +1
Query: 265 WNAVIFGPHDTPFEDGTFKLTIEFTXXYPNKPPTVRFVSKMF 390
W A I GP D+PF G F +TI F YP KPP V F +K++
Sbjct: 33 WQATIMGPADSPFAGGVFLVTIHFPPDYPFKPPKVAFRTKVY 74
Score = 44.4 bits (100), Expect = 5e-05
Identities = 27/102 (26%), Positives = 42/102 (41%)
Frame = +2
Query: 173 ARRRLMRDFKRLQEDPPTGVSGAPTDNIL*SGML*YLALMILHLKMEHSNSQ*NLXXXXX 352
A +R+ ++ + LQ DPP S PT + + + +
Sbjct: 2 ASKRINKELRDLQRDPPVSCSAGPTGDDMFQWQATIMGPADSPFAGGVFLVTIHFPPDYP 61
Query: 353 XXXXXCDLYQKCXHPNVYADGGICLDILQNRWSPTYXVSAIL 478
K HPN+ ++G ICLDIL+ +WSP VS +L
Sbjct: 62 FKPPKVAFRTKVYHPNINSNGSICLDILKEQWSPALTVSKVL 103
>At5g56150.1 68418.m07004 ubiquitin-conjugating enzyme, putative
strong similarity to ubiquitin-conjugating enzyme UBC2
[Mesembryanthemum crystallinum] GI:5762457, UBC4 [Pisum
sativum] GI:456568; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 148
Score = 50.8 bits (116), Expect = 6e-07
Identities = 21/42 (50%), Positives = 26/42 (61%)
Frame = +1
Query: 265 WNAVIFGPHDTPFEDGTFKLTIEFTXXYPNKPPTVRFVSKMF 390
W A I GP D+PF G F +TI F YP KPP V F +K++
Sbjct: 33 WQATIMGPADSPFAGGVFLVTIHFPPDYPFKPPKVAFRTKVY 74
Score = 44.4 bits (100), Expect = 5e-05
Identities = 27/102 (26%), Positives = 42/102 (41%)
Frame = +2
Query: 173 ARRRLMRDFKRLQEDPPTGVSGAPTDNIL*SGML*YLALMILHLKMEHSNSQ*NLXXXXX 352
A +R+ ++ + LQ DPP S PT + + + +
Sbjct: 2 ASKRINKELRDLQRDPPVSCSAGPTGDDMFQWQATIMGPADSPFAGGVFLVTIHFPPDYP 61
Query: 353 XXXXXCDLYQKCXHPNVYADGGICLDILQNRWSPTYXVSAIL 478
K HPN+ ++G ICLDIL+ +WSP VS +L
Sbjct: 62 FKPPKVAFRTKVYHPNINSNGSICLDILKEQWSPALTVSKVL 103
>At2g16740.1 68415.m01920 ubiquitin-conjugating enzyme, putative
strong similarity to SP|P35133 Ubiquitin-conjugating
enzyme E2-17 kDa 10 (EC 6.3.2.19) (Ubiquitin- protein
ligase 10) (Ubiquitin carrier protein 10) {Arabidopsis
thaliana}; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 148
Score = 50.8 bits (116), Expect = 6e-07
Identities = 31/106 (29%), Positives = 49/106 (46%), Gaps = 4/106 (3%)
Frame = +2
Query: 173 ARRRLMRDFKRLQEDPPTGVSGAPTDNIL*SGML*YLALMILHLKMEHSNS----Q*NLX 340
A RR++++ K LQ DPP S PT M + A ++ + +S +
Sbjct: 2 ATRRILKELKELQRDPPVSCSAGPTGE----DMFHWQATIMGPNESPYSGGVFLVNIHFP 57
Query: 341 XXXXXXXXXCDLYQKCXHPNVYADGGICLDILQNRWSPTYXVSAIL 478
K HPN+ ++G ICLDIL+++WSP +S +L
Sbjct: 58 PDYPFKPPKVVFRTKVFHPNINSNGNICLDILKDQWSPALTISKVL 103
Score = 48.0 bits (109), Expect = 4e-06
Identities = 19/42 (45%), Positives = 26/42 (61%)
Frame = +1
Query: 265 WNAVIFGPHDTPFEDGTFKLTIEFTXXYPNKPPTVRFVSKMF 390
W A I GP+++P+ G F + I F YP KPP V F +K+F
Sbjct: 33 WQATIMGPNESPYSGGVFLVNIHFPPDYPFKPPKVVFRTKVF 74
>At5g53300.2 68418.m06625 ubiquitin-conjugating enzyme 10 (UBC10)
E2; identical to gi:297877, SP:P35133
Length = 148
Score = 49.6 bits (113), Expect = 1e-06
Identities = 20/42 (47%), Positives = 26/42 (61%)
Frame = +1
Query: 265 WNAVIFGPHDTPFEDGTFKLTIEFTXXYPNKPPTVRFVSKMF 390
W A I GP ++P+ G F +TI F YP KPP V F +K+F
Sbjct: 33 WQATIMGPSESPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVF 74
Score = 47.6 bits (108), Expect = 5e-06
Identities = 29/106 (27%), Positives = 49/106 (46%), Gaps = 4/106 (3%)
Frame = +2
Query: 173 ARRRLMRDFKRLQEDPPTGVSGAPTDNIL*SGML*YLALMILHLKMEHSNS----Q*NLX 340
A +R++++ K LQ+DPPT S P M + A ++ + ++ +
Sbjct: 2 ASKRILKELKDLQKDPPTSCSAGPVAE----DMFHWQATIMGPSESPYAGGVFLVTIHFP 57
Query: 341 XXXXXXXXXCDLYQKCXHPNVYADGGICLDILQNRWSPTYXVSAIL 478
K HPN+ ++G ICLDIL+ +WSP +S +L
Sbjct: 58 PDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVL 103
>At5g53300.1 68418.m06624 ubiquitin-conjugating enzyme 10 (UBC10)
E2; identical to gi:297877, SP:P35133
Length = 148
Score = 49.6 bits (113), Expect = 1e-06
Identities = 20/42 (47%), Positives = 26/42 (61%)
Frame = +1
Query: 265 WNAVIFGPHDTPFEDGTFKLTIEFTXXYPNKPPTVRFVSKMF 390
W A I GP ++P+ G F +TI F YP KPP V F +K+F
Sbjct: 33 WQATIMGPSESPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVF 74
Score = 47.6 bits (108), Expect = 5e-06
Identities = 29/106 (27%), Positives = 49/106 (46%), Gaps = 4/106 (3%)
Frame = +2
Query: 173 ARRRLMRDFKRLQEDPPTGVSGAPTDNIL*SGML*YLALMILHLKMEHSNS----Q*NLX 340
A +R++++ K LQ+DPPT S P M + A ++ + ++ +
Sbjct: 2 ASKRILKELKDLQKDPPTSCSAGPVAE----DMFHWQATIMGPSESPYAGGVFLVTIHFP 57
Query: 341 XXXXXXXXXCDLYQKCXHPNVYADGGICLDILQNRWSPTYXVSAIL 478
K HPN+ ++G ICLDIL+ +WSP +S +L
Sbjct: 58 PDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVL 103
>At5g41700.4 68418.m05071 ubiquitin-conjugating enzyme 8 (UBC8) E2;
identical to gi:297882, SP:P35131
Length = 149
Score = 49.6 bits (113), Expect = 1e-06
Identities = 20/42 (47%), Positives = 26/42 (61%)
Frame = +1
Query: 265 WNAVIFGPHDTPFEDGTFKLTIEFTXXYPNKPPTVRFVSKMF 390
W A I GP ++P+ G F +TI F YP KPP V F +K+F
Sbjct: 34 WQATIMGPAESPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVF 75
Score = 44.0 bits (99), Expect = 6e-05
Identities = 16/32 (50%), Positives = 23/32 (71%)
Frame = +2
Query: 383 KCXHPNVYADGGICLDILQNRWSPTYXVSAIL 478
K HPN+ ++G ICLDIL+ +WSP +S +L
Sbjct: 73 KVFHPNINSNGSICLDILKEQWSPALTISKVL 104
>At5g41700.3 68418.m05068 ubiquitin-conjugating enzyme 8 (UBC8) E2;
identical to gi:297882, SP:P35131
Length = 145
Score = 49.6 bits (113), Expect = 1e-06
Identities = 20/42 (47%), Positives = 26/42 (61%)
Frame = +1
Query: 265 WNAVIFGPHDTPFEDGTFKLTIEFTXXYPNKPPTVRFVSKMF 390
W A I GP ++P+ G F +TI F YP KPP V F +K+F
Sbjct: 33 WQATIMGPAESPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVF 74
Score = 47.6 bits (108), Expect = 5e-06
Identities = 29/105 (27%), Positives = 48/105 (45%), Gaps = 4/105 (3%)
Frame = +2
Query: 173 ARRRLMRDFKRLQEDPPTGVSGAPTDNIL*SGML*YLALMILHLKMEHSNS----Q*NLX 340
A +R++++ K LQ+DPPT S P M + A ++ + +S +
Sbjct: 2 ASKRILKELKDLQKDPPTSCSAGPVAE----DMFHWQATIMGPAESPYSGGVFLVTIHFP 57
Query: 341 XXXXXXXXXCDLYQKCXHPNVYADGGICLDILQNRWSPTYXVSAI 475
K HPN+ ++G ICLDIL+ +WSP +S +
Sbjct: 58 PDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKV 102
>At5g41700.2 68418.m05070 ubiquitin-conjugating enzyme 8 (UBC8) E2;
identical to gi:297882, SP:P35131
Length = 148
Score = 49.6 bits (113), Expect = 1e-06
Identities = 20/42 (47%), Positives = 26/42 (61%)
Frame = +1
Query: 265 WNAVIFGPHDTPFEDGTFKLTIEFTXXYPNKPPTVRFVSKMF 390
W A I GP ++P+ G F +TI F YP KPP V F +K+F
Sbjct: 33 WQATIMGPAESPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVF 74
Score = 49.2 bits (112), Expect = 2e-06
Identities = 30/106 (28%), Positives = 49/106 (46%), Gaps = 4/106 (3%)
Frame = +2
Query: 173 ARRRLMRDFKRLQEDPPTGVSGAPTDNIL*SGML*YLALMILHLKMEHSNS----Q*NLX 340
A +R++++ K LQ+DPPT S P M + A ++ + +S +
Sbjct: 2 ASKRILKELKDLQKDPPTSCSAGPVAE----DMFHWQATIMGPAESPYSGGVFLVTIHFP 57
Query: 341 XXXXXXXXXCDLYQKCXHPNVYADGGICLDILQNRWSPTYXVSAIL 478
K HPN+ ++G ICLDIL+ +WSP +S +L
Sbjct: 58 PDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVL 103
>At5g41700.1 68418.m05069 ubiquitin-conjugating enzyme 8 (UBC8) E2;
identical to gi:297882, SP:P35131
Length = 148
Score = 49.6 bits (113), Expect = 1e-06
Identities = 20/42 (47%), Positives = 26/42 (61%)
Frame = +1
Query: 265 WNAVIFGPHDTPFEDGTFKLTIEFTXXYPNKPPTVRFVSKMF 390
W A I GP ++P+ G F +TI F YP KPP V F +K+F
Sbjct: 33 WQATIMGPAESPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVF 74
Score = 49.2 bits (112), Expect = 2e-06
Identities = 30/106 (28%), Positives = 49/106 (46%), Gaps = 4/106 (3%)
Frame = +2
Query: 173 ARRRLMRDFKRLQEDPPTGVSGAPTDNIL*SGML*YLALMILHLKMEHSNS----Q*NLX 340
A +R++++ K LQ+DPPT S P M + A ++ + +S +
Sbjct: 2 ASKRILKELKDLQKDPPTSCSAGPVAE----DMFHWQATIMGPAESPYSGGVFLVTIHFP 57
Query: 341 XXXXXXXXXCDLYQKCXHPNVYADGGICLDILQNRWSPTYXVSAIL 478
K HPN+ ++G ICLDIL+ +WSP +S +L
Sbjct: 58 PDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVL 103
>At3g46460.1 68416.m05037 ubiquitin-conjugating enzyme 13 (UBC13)
E2; identical to gi:992706
Length = 166
Score = 49.6 bits (113), Expect = 1e-06
Identities = 21/46 (45%), Positives = 27/46 (58%)
Frame = +1
Query: 253 HIMIWNAVIFGPHDTPFEDGTFKLTIEFTXXYPNKPPTVRFVSKMF 390
+I W+ I GP DT +E G F + F YPN PPTVRF S ++
Sbjct: 33 NIFEWSVTIIGPPDTLYEGGFFYAIMSFPQNYPNSPPTVRFTSDIW 78
Score = 29.9 bits (64), Expect = 1.1
Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 13/42 (30%)
Frame = +2
Query: 392 HPNVYADGGICLDIL-------------QNRWSPTYXVSAIL 478
HPNVY DG +C+ IL RW+P + V +I+
Sbjct: 79 HPNVYPDGRVCISILHPPGDDPSGYELASERWTPVHTVESIM 120
>At1g36340.1 68414.m04516 ubiquitin-conjugating enzyme family
protein similar to Ubiquitin-conjugating enzyme E2-16
kDa (EC 6.3.2.19) (Ubiquitin-protein ligase) (Ubiquitin
carrier protein) from {Schizosaccharomyces pombe}
SP|P46595, {Caenorhabditis elegans} SP|P35129; contains
Pfam profile PF00179: Ubiquitin-conjugating enzyme
Length = 154
Score = 49.6 bits (113), Expect = 1e-06
Identities = 24/62 (38%), Positives = 37/62 (59%)
Frame = +1
Query: 205 LTRGSTYRCVRSSN**HIMIWNAVIFGPHDTPFEDGTFKLTIEFTXXYPNKPPTVRFVSK 384
+++ S + ++SN +I W AVI GP TP+E G F L+I+F YP KPP F +
Sbjct: 21 ISKESLFSIGQNSN--NIYEWTAVIRGPDGTPYEGGMFNLSIKFPTDYPFKPPKFTFKTP 78
Query: 385 MF 390
++
Sbjct: 79 IY 80
Score = 37.9 bits (84), Expect = 0.004
Identities = 13/41 (31%), Positives = 25/41 (60%)
Frame = +2
Query: 392 HPNVYADGGICLDILQNRWSPTYXVSAILTXYTVXIKVIQP 514
HPN+ +G IC++IL+++W+P V +L + ++ P
Sbjct: 81 HPNINDEGSICMNILKDKWTPALMVEKVLLSILLLLEKPNP 121
>At3g08690.1 68416.m01010 ubiquitin-conjugating enzyme 11 (UBC11)
E2; identical to gi:12643427, SP:P35134
Length = 148
Score = 46.8 bits (106), Expect = 9e-06
Identities = 28/106 (26%), Positives = 49/106 (46%), Gaps = 4/106 (3%)
Frame = +2
Query: 173 ARRRLMRDFKRLQEDPPTGVSGAPTDNIL*SGML*YLALMILHLKMEHSNS----Q*NLX 340
A +R++++ K LQ+DPP+ S P M + A ++ + ++ +
Sbjct: 2 ASKRILKELKDLQKDPPSNCSAGPVAE----DMFHWQATIMGPPESPYAGGVFLVSIHFP 57
Query: 341 XXXXXXXXXCDLYQKCXHPNVYADGGICLDILQNRWSPTYXVSAIL 478
K HPN+ ++G ICLDIL+ +WSP +S +L
Sbjct: 58 PDYPFKPPKVSFKTKVYHPNINSNGSICLDILKEQWSPALTISKVL 103
Score = 46.8 bits (106), Expect = 9e-06
Identities = 18/42 (42%), Positives = 26/42 (61%)
Frame = +1
Query: 265 WNAVIFGPHDTPFEDGTFKLTIEFTXXYPNKPPTVRFVSKMF 390
W A I GP ++P+ G F ++I F YP KPP V F +K++
Sbjct: 33 WQATIMGPPESPYAGGVFLVSIHFPPDYPFKPPKVSFKTKVY 74
>At3g55380.1 68416.m06151 ubiquitin-conjugating enzyme 14 (UBC14)
E2; UbcAT3; identical to gi:2129757, S46656
Length = 167
Score = 45.6 bits (103), Expect = 2e-05
Identities = 19/46 (41%), Positives = 26/46 (56%)
Frame = +1
Query: 253 HIMIWNAVIFGPHDTPFEDGTFKLTIEFTXXYPNKPPTVRFVSKMF 390
++ W+ I GP DT +E G F + F YP PPTV F S+M+
Sbjct: 34 NVFQWSVSIMGPPDTLYEGGFFNAIMSFPENYPVSPPTVTFTSEMW 79
Score = 30.3 bits (65), Expect = 0.84
Identities = 10/15 (66%), Positives = 13/15 (86%)
Frame = +2
Query: 392 HPNVYADGGICLDIL 436
HPNVY+DG +C+ IL
Sbjct: 80 HPNVYSDGKVCISIL 94
>At1g50490.1 68414.m05662 ubiquitin-conjugating enzyme 20 (UBC20)
nearly identical to ubiquitin-conjugating enzyme UBC20
[Arabidopsis thaliana] GI:22530867; contains Pfam
profile PF00179: Ubiquitin-conjugating enzyme
Length = 180
Score = 45.6 bits (103), Expect = 2e-05
Identities = 19/31 (61%), Positives = 21/31 (67%)
Frame = +2
Query: 386 CXHPNVYADGGICLDILQNRWSPTYXVSAIL 478
C HPNV G ICLDILQ++WS Y V IL
Sbjct: 107 CFHPNVDVYGNICLDILQDKWSSAYDVRTIL 137
Score = 42.7 bits (96), Expect = 1e-04
Identities = 18/46 (39%), Positives = 26/46 (56%)
Frame = +1
Query: 253 HIMIWNAVIFGPHDTPFEDGTFKLTIEFTXXYPNKPPTVRFVSKMF 390
+I W I G DT FE ++L++ F+ YP KPP V+F + F
Sbjct: 63 NIFCWKGTITGSKDTVFEGTEYRLSLSFSNDYPFKPPKVKFETCCF 108
>At3g20060.1 68416.m02537 ubiquitin-conjugating enzyme 19 (UBC19)
nearly identical to ubiquitin-conjugating enzyme UBC19
[Arabidopsis thaliana] GI:22530865; contains Pfam
profile PF00179: Ubiquitin-conjugating enzyme
Length = 181
Score = 45.2 bits (102), Expect = 3e-05
Identities = 19/31 (61%), Positives = 21/31 (67%)
Frame = +2
Query: 386 CXHPNVYADGGICLDILQNRWSPTYXVSAIL 478
C HPNV G ICLDILQ++WS Y V IL
Sbjct: 108 CFHPNVDLYGNICLDILQDKWSSAYDVRTIL 138
Score = 39.1 bits (87), Expect = 0.002
Identities = 17/46 (36%), Positives = 25/46 (54%)
Frame = +1
Query: 253 HIMIWNAVIFGPHDTPFEDGTFKLTIEFTXXYPNKPPTVRFVSKMF 390
+I W I G DT FE ++L++ F+ YP K P V+F + F
Sbjct: 64 NIFCWKGTITGSKDTVFEGTEYRLSLTFSNDYPFKSPKVKFETCCF 109
>At1g70660.1 68414.m08146 ubiquitin-conjugating enzyme family
protein similar to TRAF6-regulated IKK activator 1 beta
Uev1A [Homo sapiens] GI:10880969; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 159
Score = 44.8 bits (101), Expect = 4e-05
Identities = 18/41 (43%), Positives = 24/41 (58%)
Frame = +1
Query: 265 WNAVIFGPHDTPFEDGTFKLTIEFTXXYPNKPPTVRFVSKM 387
W I GPH+T +E F+L + YP PPTVRF S++
Sbjct: 47 WTGTILGPHNTAYEGKIFQLKLFCGKDYPESPPTVRFQSRI 87
>At3g57870.1 68416.m06451 ubiquitin-conjugating enzyme, putative
strong similarity to SP|P50550 Ubiquitin-like protein
SUMO-1 conjugating enzyme (EC 6.3.2.19) (SUMO- 1-protein
ligase) (Ubiquitin carrier protein)
(Ubiquitin-conjugating enzyme UbcE2A) {Xenopus laevis};
contains Pfam profile PF00179: Ubiquitin-conjugating
enzyme
Length = 160
Score = 44.4 bits (100), Expect = 5e-05
Identities = 18/46 (39%), Positives = 27/46 (58%)
Frame = +1
Query: 253 HIMIWNAVIFGPHDTPFEDGTFKLTIEFTXXYPNKPPTVRFVSKMF 390
++M+W+ I G T +E G F LT+ F+ YP+KPP +F F
Sbjct: 38 NLMVWHCTIPGKAGTDWEGGFFPLTMHFSEDYPSKPPKCKFPQGFF 83
Score = 34.3 bits (75), Expect = 0.051
Identities = 17/39 (43%), Positives = 18/39 (46%), Gaps = 2/39 (5%)
Frame = +2
Query: 368 CDLYQKCXHPNVYADGGICLDILQN--RWSPTYXVSAIL 478
C Q HPNVY G +CL IL W P V IL
Sbjct: 76 CKFPQGFFHPNVYPSGTVCLSILNEDYGWRPAITVKQIL 114
>At3g13550.1 68416.m01703 ubiquitin-conjugating enzyme (COP10)
identical to ubiquitin-conjugating enzyme COP10
[Arabidopsis thaliana] GI:20065779; contains Pfam
profile PF00179: Ubiquitin-conjugating enzyme
Length = 182
Score = 44.0 bits (99), Expect = 6e-05
Identities = 19/42 (45%), Positives = 25/42 (59%)
Frame = +1
Query: 265 WNAVIFGPHDTPFEDGTFKLTIEFTXXYPNKPPTVRFVSKMF 390
W A I GP TP+E G F L I F YP KPP + F ++++
Sbjct: 68 WIATIIGPSGTPYEGGIFFLDIIFPSDYPFKPPKLVFKTRIY 109
>At3g52560.1 68416.m05784 ubiquitin-conjugating enzyme family
protein similar to DNA-binding protein CROC-1B [Homo
sapiens] GI:1066082; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 146
Score = 43.6 bits (98), Expect = 8e-05
Identities = 18/41 (43%), Positives = 24/41 (58%)
Frame = +1
Query: 265 WNAVIFGPHDTPFEDGTFKLTIEFTXXYPNKPPTVRFVSKM 387
W I GPH+T E ++L + YP KPPTVRF S++
Sbjct: 49 WTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPTVRFHSRV 89
>At2g36060.1 68415.m04427 ubiquitin-conjugating enzyme family
protein similar to DNA-binding protein CROC-1B [Homo
sapiens] GI:1066082; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 145
Score = 43.6 bits (98), Expect = 8e-05
Identities = 18/41 (43%), Positives = 24/41 (58%)
Frame = +1
Query: 265 WNAVIFGPHDTPFEDGTFKLTIEFTXXYPNKPPTVRFVSKM 387
W I GPH+T E ++L + YP KPPTVRF S++
Sbjct: 48 WTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPTVRFHSRI 88
>At1g78870.1 68414.m09193 ubiquitin-conjugating enzyme, putative
nearly identical to ubiquitin-conjugating enzyme E2
[Catharanthus roseus] GI:5381319; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 112
Score = 43.6 bits (98), Expect = 8e-05
Identities = 29/108 (26%), Positives = 49/108 (45%), Gaps = 5/108 (4%)
Frame = +2
Query: 179 RRLMRDFKRLQEDPPTGVSGAPTDNIL*SGML*YLALMILHLKMEHSNS-----Q*NLXX 343
RR++++ +RL +P G+S +P+++ + Y +MIL + L
Sbjct: 8 RRIIKETQRLLSEPAPGISASPSED-----NMRYFNVMILGPTQSPYEGGVFKLELFLPE 62
Query: 344 XXXXXXXXCDLYQKCXHPNVYADGGICLDILQNRWSPTYXVSAILTXY 487
K HPN+ G ICLDIL+++WSP + +L Y
Sbjct: 63 EYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLRY 110
Score = 42.7 bits (96), Expect = 1e-04
Identities = 17/42 (40%), Positives = 26/42 (61%)
Frame = +1
Query: 265 WNAVIFGPHDTPFEDGTFKLTIEFTXXYPNKPPTVRFVSKMF 390
+N +I GP +P+E G FKL + YP P VRF++K++
Sbjct: 37 FNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIY 78
>At1g75440.1 68414.m08763 ubiquitin-conjugating enzyme 16 (UBC16)
E2; identical to gi:2801444, GB:AAC39325 from
[Arabidopsis thaliana] (Plant Mol. Biol. 23 (2), 387-396
(1993))
Length = 161
Score = 43.6 bits (98), Expect = 8e-05
Identities = 31/105 (29%), Positives = 46/105 (43%)
Frame = +2
Query: 161 MSTPARRRLMRDFKRLQEDPPTGVSGAPTDNIL*SGML*YLALMILHLKMEHSNSQ*NLX 340
+S A RL ++ Q +PPTG TDN+ + A L+ +
Sbjct: 12 LSKIATNRLQKELVEWQMNPPTGFKHKVTDNLQRWIIEVIGAPGTLYANDTYQLQVDFPE 71
Query: 341 XXXXXXXXXCDLYQKCXHPNVYADGGICLDILQNRWSPTYXVSAI 475
L+ HP++Y++G ICLDIL + WSP VS+I
Sbjct: 72 HYPMESPQVIFLHPAPLHPHIYSNGHICLDILYDSWSPAMTVSSI 116
>At2g32790.1 68415.m04014 ubiquitin-conjugating enzyme, putative
similar to ubiquitin conjugating enzyme from [Oryza
sativa] GI:1373001, {Arabidopsis thaliana} SP|P35134,
SP|P35131; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 177
Score = 43.2 bits (97), Expect = 1e-04
Identities = 16/46 (34%), Positives = 26/46 (56%)
Frame = +1
Query: 253 HIMIWNAVIFGPHDTPFEDGTFKLTIEFTXXYPNKPPTVRFVSKMF 390
+I W A + GP P+E G F +++ YP +PP + F +K+F
Sbjct: 58 NIFRWEATVNGPVGCPYEKGVFTVSVHIPPKYPYEPPKITFKTKIF 103
Score = 31.5 bits (68), Expect = 0.36
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +2
Query: 383 KCXHPNVYADGGICLDILQNRWSPTYXVSAIL 478
K HPN+ G I +DIL +RWS ++ +L
Sbjct: 101 KIFHPNISEIGEIFVDILGSRWSSALTINLVL 132
>At1g78870.2 68414.m09194 ubiquitin-conjugating enzyme, putative
nearly identical to ubiquitin-conjugating enzyme E2
[Catharanthus roseus] GI:5381319; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 153
Score = 42.7 bits (96), Expect = 1e-04
Identities = 17/42 (40%), Positives = 26/42 (61%)
Frame = +1
Query: 265 WNAVIFGPHDTPFEDGTFKLTIEFTXXYPNKPPTVRFVSKMF 390
+N +I GP +P+E G FKL + YP P VRF++K++
Sbjct: 37 FNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIY 78
Score = 41.9 bits (94), Expect = 3e-04
Identities = 29/117 (24%), Positives = 50/117 (42%), Gaps = 5/117 (4%)
Frame = +2
Query: 179 RRLMRDFKRLQEDPPTGVSGAPTDNIL*SGML*YLALMILHLKMEHSNS-----Q*NLXX 343
RR++++ +RL +P G+S +P+++ + Y +MIL + L
Sbjct: 8 RRIIKETQRLLSEPAPGISASPSED-----NMRYFNVMILGPTQSPYEGGVFKLELFLPE 62
Query: 344 XXXXXXXXCDLYQKCXHPNVYADGGICLDILQNRWSPTYXVSAILTXYTVXIKVIQP 514
K HPN+ G ICLDIL+++WSP + +L + P
Sbjct: 63 EYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNP 119
>At1g16890.2 68414.m02044 ubiquitin-conjugating enzyme, putative
nearly identical to ubiquitin-conjugating enzyme E2
[Catharanthus roseus] GI:5381319; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 153
Score = 42.7 bits (96), Expect = 1e-04
Identities = 17/42 (40%), Positives = 26/42 (61%)
Frame = +1
Query: 265 WNAVIFGPHDTPFEDGTFKLTIEFTXXYPNKPPTVRFVSKMF 390
+N +I GP +P+E G FKL + YP P VRF++K++
Sbjct: 37 FNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIY 78
Score = 41.5 bits (93), Expect = 3e-04
Identities = 29/117 (24%), Positives = 49/117 (41%), Gaps = 5/117 (4%)
Frame = +2
Query: 179 RRLMRDFKRLQEDPPTGVSGAPTDNIL*SGML*YLALMILHLKMEHSNS-----Q*NLXX 343
RR++++ +RL +P G+S +P++ + Y +MIL + L
Sbjct: 8 RRIIKETQRLLSEPAPGISASPSEE-----NMRYFNVMILGPTQSPYEGGVFKLELFLPE 62
Query: 344 XXXXXXXXCDLYQKCXHPNVYADGGICLDILQNRWSPTYXVSAILTXYTVXIKVIQP 514
K HPN+ G ICLDIL+++WSP + +L + P
Sbjct: 63 EYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNP 119
>At1g16890.1 68414.m02043 ubiquitin-conjugating enzyme, putative
nearly identical to ubiquitin-conjugating enzyme E2
[Catharanthus roseus] GI:5381319; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 120
Score = 42.7 bits (96), Expect = 1e-04
Identities = 17/42 (40%), Positives = 26/42 (61%)
Frame = +1
Query: 265 WNAVIFGPHDTPFEDGTFKLTIEFTXXYPNKPPTVRFVSKMF 390
+N +I GP +P+E G FKL + YP P VRF++K++
Sbjct: 4 FNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIY 45
Score = 39.5 bits (88), Expect = 0.001
Identities = 16/44 (36%), Positives = 23/44 (52%)
Frame = +2
Query: 383 KCXHPNVYADGGICLDILQNRWSPTYXVSAILTXYTVXIKVIQP 514
K HPN+ G ICLDIL+++WSP + +L + P
Sbjct: 43 KIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNP 86
>At5g42990.1 68418.m05243 ubiquitin-conjugating enzyme 18 (UBC18)
E2; identical to gi:2801448
Length = 161
Score = 41.9 bits (94), Expect = 3e-04
Identities = 15/28 (53%), Positives = 22/28 (78%)
Frame = +2
Query: 392 HPNVYADGGICLDILQNRWSPTYXVSAI 475
HP++Y++G ICLDIL + WSP VS++
Sbjct: 89 HPHIYSNGHICLDILYDSWSPAMTVSSV 116
Score = 29.1 bits (62), Expect = 1.9
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = +1
Query: 265 WNAVIFGPHDTPFEDGTFKLTIEFTXXYPNKPPTVRFV 378
W + G T + + T+ L +EF YP + P V FV
Sbjct: 46 WVIEVTGAPGTLYANETYNLQVEFPQHYPMEAPQVIFV 83
>At4g36410.1 68417.m05173 ubiquitin-conjugating enzyme 17 (UBC17)
E2; identical to gi:2801446
Length = 161
Score = 40.7 bits (91), Expect = 6e-04
Identities = 14/28 (50%), Positives = 22/28 (78%)
Frame = +2
Query: 392 HPNVYADGGICLDILQNRWSPTYXVSAI 475
HP++Y++G ICLD+L + WSP +S+I
Sbjct: 89 HPHIYSNGHICLDVLYDSWSPAMRLSSI 116
Score = 27.9 bits (59), Expect = 4.5
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = +1
Query: 265 WNAVIFGPHDTPFEDGTFKLTIEFTXXYPNKPPTVRF 375
W + G T + + T++L +EF YP + P V F
Sbjct: 46 WIIEVHGVPGTLYANETYQLQVEFPEHYPMEAPQVIF 82
>At1g45050.1 68414.m05165 ubiquitin-conjugating enzyme 15 (UBC15)
E2; identical to ubiquitin-conjugating enzyme 15
GI:2801442 from [Arabidopsis thaliana]
Length = 161
Score = 40.7 bits (91), Expect = 6e-04
Identities = 14/28 (50%), Positives = 22/28 (78%)
Frame = +2
Query: 392 HPNVYADGGICLDILQNRWSPTYXVSAI 475
HP++Y++G ICLDIL + WSP V+++
Sbjct: 89 HPHIYSNGHICLDILYDSWSPAMTVNSV 116
Score = 31.9 bits (69), Expect = 0.27
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = +1
Query: 265 WNAVIFGPHDTPFEDGTFKLTIEFTXXYPNKPPTVRFVS 381
W + G T + + T++L +EF YP + P V FVS
Sbjct: 46 WTIDVTGAPGTLYANETYQLQVEFPEHYPMEAPQVVFVS 84
>At3g52560.2 68416.m05785 ubiquitin-conjugating enzyme family
protein similar to DNA-binding protein CROC-1B [Homo
sapiens] GI:1066082; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 147
Score = 39.9 bits (89), Expect = 0.001
Identities = 17/42 (40%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = +1
Query: 265 WNAVIFGPHDTPFEDGT-FKLTIEFTXXYPNKPPTVRFVSKM 387
W I GPH+ +G ++L + YP KPPTVRF S++
Sbjct: 49 WTGTIIGPHNVTVHEGRIYQLKLFCDKDYPEKPPTVRFHSRV 90
>At2g36060.2 68415.m04428 ubiquitin-conjugating enzyme family
protein similar to DNA-binding protein CROC-1B [Homo
sapiens] GI:1066082; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 146
Score = 39.9 bits (89), Expect = 0.001
Identities = 17/42 (40%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = +1
Query: 265 WNAVIFGPHDTPFEDGT-FKLTIEFTXXYPNKPPTVRFVSKM 387
W I GPH+ +G ++L + YP KPPTVRF S++
Sbjct: 48 WTGTIIGPHNVTVHEGRIYQLKLFCDKDYPEKPPTVRFHSRI 89
>At1g23260.1 68414.m02910 ubiquitin-conjugating enzyme family
protein similar to TRAF6-regulated IKK activator 1 beta
Uev1A [Homo sapiens] GI:10880969; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 158
Score = 39.9 bits (89), Expect = 0.001
Identities = 16/45 (35%), Positives = 25/45 (55%)
Frame = +1
Query: 253 HIMIWNAVIFGPHDTPFEDGTFKLTIEFTXXYPNKPPTVRFVSKM 387
++ W I GP +T +E F+L + YP PPTVRF +++
Sbjct: 43 YMQSWTGTILGPPNTAYEGKIFQLKLFCGKEYPESPPTVRFQTRI 87
>At5g50870.1 68418.m06304 ubiquitin-conjugating enzyme, putative
strong similarity to ubiquitin conjugating enzyme
[Lycopersicon esculentum] GI:886679; contains Pfam
profile PF00179: Ubiquitin-conjugating enzyme
Length = 192
Score = 39.5 bits (88), Expect = 0.001
Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Frame = +2
Query: 383 KCXHPNVYADGG-ICLDILQNRWSPTYXVSAILTXYTVXIKVIQPK 517
K HPN+ + G ICLDIL+++WSP + L + +PK
Sbjct: 74 KVWHPNISSQSGAICLDILKDQWSPALTLKTALVSIQALLSAPEPK 119
Score = 38.7 bits (86), Expect = 0.002
Identities = 15/36 (41%), Positives = 24/36 (66%)
Frame = +1
Query: 283 GPHDTPFEDGTFKLTIEFTXXYPNKPPTVRFVSKMF 390
GP TP+E GTF++ I YP +PP ++F +K++
Sbjct: 41 GPIGTPYEGGTFQIDITMPDGYPFEPPKMQFSTKVW 76
>At1g53020.1 68414.m06002 ubiquitin-conjugating enzyme family
protein similar to ubiquitin-conjugating enzyme
GB:3319990 from [Mus musculus]; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 1163
Score = 39.5 bits (88), Expect = 0.001
Identities = 17/37 (45%), Positives = 21/37 (56%)
Frame = +1
Query: 271 AVIFGPHDTPFEDGTFKLTIEFTXXYPNKPPTVRFVS 381
AVI G TP+ DG F I+F YP+ PP V + S
Sbjct: 305 AVIIGAEGTPYHDGLFFFDIQFPDTYPSVPPNVHYHS 341
Score = 39.5 bits (88), Expect = 0.001
Identities = 18/42 (42%), Positives = 23/42 (54%)
Frame = +1
Query: 256 IMIWNAVIFGPHDTPFEDGTFKLTIEFTXXYPNKPPTVRFVS 381
I + AVI G TP+ DG F I+F YP+ PP V + S
Sbjct: 634 IDLLRAVIIGAEGTPYHDGLFFFDIQFPDTYPSVPPKVHYHS 675
Score = 38.7 bits (86), Expect = 0.002
Identities = 17/37 (45%), Positives = 21/37 (56%)
Frame = +1
Query: 271 AVIFGPHDTPFEDGTFKLTIEFTXXYPNKPPTVRFVS 381
AVI G TP+ DG F I+F YP+ PP V + S
Sbjct: 951 AVIIGAEGTPYHDGLFFFDIQFPDTYPSVPPNVYYHS 987
>At1g63800.1 68414.m07220 ubiquitin-conjugating enzyme 5 (UBC5) E2;
identical to gi:431269, SP:P42749
Length = 185
Score = 38.7 bits (86), Expect = 0.002
Identities = 14/36 (38%), Positives = 24/36 (66%)
Frame = +1
Query: 283 GPHDTPFEDGTFKLTIEFTXXYPNKPPTVRFVSKMF 390
GP D+ +E G +K+ +E YP K P+V F++K++
Sbjct: 38 GPKDSIYEGGVWKIRVELPDAYPYKSPSVGFITKIY 73
Score = 32.3 bits (70), Expect = 0.21
Identities = 12/27 (44%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
Frame = +2
Query: 383 KCXHPNV-YADGGICLDILQNRWSPTY 460
K HPNV G +CLD++ WSP +
Sbjct: 71 KIYHPNVDEMSGSVCLDVINQTWSPMF 97
>At5g05080.1 68418.m00539 ubiquitin-conjugating enzyme, putative
similar to SP|Q16763 Ubiquitin-conjugating enzyme E2-24
kDa (EC 6.3.2.19) (Ubiquitin- protein ligase) (Ubiquitin
carrier protein) {Homo sapiens}; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 251
Score = 38.3 bits (85), Expect = 0.003
Identities = 15/40 (37%), Positives = 26/40 (65%)
Frame = +1
Query: 271 AVIFGPHDTPFEDGTFKLTIEFTXXYPNKPPTVRFVSKMF 390
A I GP TP+E+G F++ + + +P+ PP F++K+F
Sbjct: 44 ADIEGPVGTPYENGLFRMKLALSHDFPHSPPKGYFMTKIF 83
Score = 33.9 bits (74), Expect = 0.068
Identities = 15/44 (34%), Positives = 27/44 (61%)
Frame = +2
Query: 383 KCXHPNVYADGGICLDILQNRWSPTYXVSAILTXYTVXIKVIQP 514
K HPNV ++G IC++ L+ W+P+ + +L+ V +I+P
Sbjct: 81 KIFHPNVASNGEICVNTLKKDWNPSLGLRHVLS--VVRCLLIEP 122
>At3g24515.1 68416.m03077 ubiquitin-conjugating enzyme, putative
similar to Ubiquitin-conjugating enzyme E2
(Ubiquitin-protein ligase) (Ubiquitin carrier protein)
from {Xenopus laevis} SP|P51669, {Schizosaccharomyces
pombe} SP|P46595, {Caenorhabditis elegans} SP|P35129;
contains Pfam profile PF00179: Ubiquitin-conjugating
enzyme
Length = 409
Score = 37.9 bits (84), Expect = 0.004
Identities = 16/41 (39%), Positives = 24/41 (58%)
Frame = +1
Query: 268 NAVIFGPHDTPFEDGTFKLTIEFTXXYPNKPPTVRFVSKMF 390
+A I GP DT + +G F L I+ YP +PP V F + ++
Sbjct: 48 DAQIEGPEDTVYANGIFNLKIQIPERYPFQPPIVSFATPIY 88
Score = 33.9 bits (74), Expect = 0.068
Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 4/45 (8%)
Frame = +2
Query: 392 HPNVYADGGICLDIL----QNRWSPTYXVSAILTXYTVXIKVIQP 514
HPN+ G ICLDIL + W P+ +S +LT + + P
Sbjct: 89 HPNIDNSGRICLDILNLPPKGAWQPSLNISTVLTSMRLLLSEPNP 133
>At2g46030.1 68415.m05726 ubiquitin-conjugating enzyme 6 (UBC6) E2;
identical to gi|431267, SP:P42750, PIR:S52661; contains
a ubiquitin-conjugating enzymes active site (PDOC00163)
Length = 183
Score = 37.9 bits (84), Expect = 0.004
Identities = 14/45 (31%), Positives = 27/45 (60%)
Frame = +1
Query: 256 IMIWNAVIFGPHDTPFEDGTFKLTIEFTXXYPNKPPTVRFVSKMF 390
+ ++ GP D+ ++ G +K+ +E YP K P+V FV+K++
Sbjct: 29 LQMFYVTFHGPTDSLYQGGVWKIKVELPEAYPYKSPSVGFVNKIY 73
Score = 33.1 bits (72), Expect = 0.12
Identities = 12/27 (44%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
Frame = +2
Query: 383 KCXHPNV-YADGGICLDILQNRWSPTY 460
K HPNV + G +CLD++ WSP +
Sbjct: 71 KIYHPNVDESSGAVCLDVINQTWSPMF 97
>At5g41340.1 68418.m05024 ubiquitin-conjugating enzyme 4 (UBC4) E2;
identical to gi:431265, SP:P42748
Length = 187
Score = 37.5 bits (83), Expect = 0.006
Identities = 13/36 (36%), Positives = 24/36 (66%)
Frame = +1
Query: 283 GPHDTPFEDGTFKLTIEFTXXYPNKPPTVRFVSKMF 390
GP D+ ++ G +K+ +E YP K P+V F++K++
Sbjct: 38 GPKDSLYQGGVWKIRVELPDAYPYKSPSVGFITKIY 73
Score = 32.3 bits (70), Expect = 0.21
Identities = 12/27 (44%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
Frame = +2
Query: 383 KCXHPNV-YADGGICLDILQNRWSPTY 460
K HPNV G +CLD++ WSP +
Sbjct: 71 KIYHPNVDELSGSVCLDVINQTWSPMF 97
>At3g15355.1 68416.m01945 ubiquitin-conjugating enzyme-related
similar to ubiquitin-conjugating enzyme (GI:3319990)
[Mus musculus]; similar to Baculoviral IAP
repeat-containing protein 6 (Ubiquitin-conjugating
BIR-domain enzyme apollon) (Swiss-Prot:Q9NR09) [Homo
sapiens];
Length = 609
Score = 37.5 bits (83), Expect = 0.006
Identities = 17/37 (45%), Positives = 20/37 (54%)
Frame = +1
Query: 271 AVIFGPHDTPFEDGTFKLTIEFTXXYPNKPPTVRFVS 381
AVI G TP+ DG F I F YP+ PP V + S
Sbjct: 366 AVIIGAQGTPYHDGLFFFDIFFPDTYPSTPPIVHYHS 402
>At2g18600.1 68415.m02166 RUB1-conjugating enzyme, putative strong
similarity to gi:6635457 RUB1 conjugating enzyme
[Arabidopsis thaliana]; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 185
Score = 36.3 bits (80), Expect = 0.013
Identities = 11/32 (34%), Positives = 20/32 (62%)
Frame = +2
Query: 383 KCXHPNVYADGGICLDILQNRWSPTYXVSAIL 478
K HPN+ +G +CL+IL+ W P ++ ++
Sbjct: 101 KVYHPNIDLEGNVCLNILREDWKPVLNINTVI 132
>At3g17000.1 68416.m02171 ubiquitin-conjugating enzyme, putative
similar to Non-Canonical UBiquitin Conjugating Enzyme 1
(NCUBE1) from [Gallus gallus] GI:7362937, [Mus musculus]
GI:7363050, [Homo sapiens] GI:7362973; contains Pfam
profile PF00179: Ubiquitin-conjugating enzyme
Length = 309
Score = 35.9 bits (79), Expect = 0.017
Identities = 16/38 (42%), Positives = 20/38 (52%)
Frame = +1
Query: 253 HIMIWNAVIFGPHDTPFEDGTFKLTIEFTXXYPNKPPT 366
+I W I GP DT FE G + I+ YP KPP+
Sbjct: 39 NIFEWQFAIRGPGDTEFEGGIYHGRIQLPADYPFKPPS 76
>At5g50430.1 68418.m06245 ubiquitin-conjugating enzyme, putative
similar to ubiquitin conjugating enzyme 6 from [Homo
sapiens] GI:14029267, [Mus musculus] GI:14029263;
contains Pfam profile PF00179: Ubiquitin-conjugating
enzyme
Length = 243
Score = 34.7 bits (76), Expect = 0.039
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = +1
Query: 256 IMIWNAVIFGPHDTPFEDGTFKLTIEFTXXYPNKPPTV 369
I+ W+ V+ G TPF G + I+F YP KPP +
Sbjct: 34 ILEWHYVLEGSEGTPFAGGFYYGKIKFPPEYPYKPPGI 71
>At1g17280.1 68414.m02105 ubiquitin-conjugating enzyme, putative
similar to ubiquitin conjugating enzyme 6 from [Homo
sapiens] GI:14029267, [Mus musculus] GI:14029263;
contains Pfam profile PF00179: Ubiquitin-conjugating
enzyme
Length = 237
Score = 34.7 bits (76), Expect = 0.039
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = +1
Query: 256 IMIWNAVIFGPHDTPFEDGTFKLTIEFTXXYPNKPPTV 369
I+ W+ V+ G TPF G + I+F YP KPP +
Sbjct: 34 ILEWHYVLEGSEGTPFAGGFYYGKIKFPPEYPYKPPGI 71
>At2g33770.1 68415.m04141 ubiquitin-conjugating enzyme family
protein low similarity to ubiquitin-conjugating
BIR-domain enzyme APOLLON [Homo sapiens] GI:8489831,
ubiquitin-conjugating enzyme [Mus musculus] GI:3319990;
contains Pfam profile PF00179: Ubiquitin-conjugating
enzyme
Length = 907
Score = 32.7 bits (71), Expect = 0.16
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = +1
Query: 271 AVIFGPHDTPFEDGTFKLTIEFTXXYPNKPPTVRFVS 381
A + G TP+ DG F I YP++PP V + S
Sbjct: 696 AALVGAPGTPYHDGLFFFDIMLPPQYPHEPPMVHYHS 732
>At2g16920.1 68415.m01949 ubiquitin-conjugating enzyme family
protein low similarity to ubiquitin-conjugating
BIR-domain enzyme APOLLON [Homo sapiens] GI:8489831,
ubiquitin-conjugating enzyme [Mus musculus] GI:3319990;
contains Pfam profile PF00179: Ubiquitin-conjugating
enzyme
Length = 1102
Score = 32.7 bits (71), Expect = 0.16
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = +1
Query: 271 AVIFGPHDTPFEDGTFKLTIEFTXXYPNKPPTVRFVS 381
AVI G TP++DG F YP+ PP+ + S
Sbjct: 884 AVIVGAFGTPYQDGLFFFDFHLPSDYPSVPPSAYYHS 920
>At3g60650.1 68416.m06786 expressed protein
Length = 107
Score = 28.3 bits (60), Expect = 3.4
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +1
Query: 370 RFVSKMFXSKCLRRWWNLPRYPAKQMES 453
R K SK + R W +P+YP KQ +S
Sbjct: 58 RASDKKVSSKRVSRTWKIPKYPKKQPKS 85
>At5g31685.1 68418.m03766 expressed protein ; expression supported
by MPSS
Length = 519
Score = 27.1 bits (57), Expect = 7.8
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = +1
Query: 112 KSRKISLCYNLGIENQNVNSSKKTPDEGF*TLTRGSTYRC 231
K++K+ N+ + N N P EGF TL G Y C
Sbjct: 147 KNKKVVRFGNVTLRVPNPNERVDDPPEGFLTLYEGFFYLC 186
>At2g14080.1 68415.m01566 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1215
Score = 27.1 bits (57), Expect = 7.8
Identities = 25/77 (32%), Positives = 36/77 (46%), Gaps = 4/77 (5%)
Frame = +1
Query: 256 IMIWNAVIFGPHDTPFEDGTFKLTIEFTXXYPNKPPTVRFVSKMFXSKCLRRW-WNLPRY 432
+ I+ FG TP+ DG +KL + T N P +R V F + W +PR
Sbjct: 397 LQIFCMYAFG-QKTPY-DGFYKLARKVTWLVGNFPLGLRVVGSYFREMSKQEWRKEIPRL 454
Query: 433 PAK---QMESYLXCFSY 474
A+ ++ES L FSY
Sbjct: 455 RARLDGKIESVLK-FSY 470
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,909,679
Number of Sequences: 28952
Number of extensions: 208689
Number of successful extensions: 552
Number of sequences better than 10.0: 59
Number of HSP's better than 10.0 without gapping: 470
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 552
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 977150592
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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