Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0671
         (648 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY058402-1|AAL13631.1|  375|Drosophila melanogaster GH17085p pro...    48   1e-05
AL109630-5|CAB65874.1|  375|Drosophila melanogaster EG:BACR7A4.1...    48   1e-05
AE014298-125|AAF45565.2|  375|Drosophila melanogaster CG3708-PA ...    48   1e-05
U39553-1|AAB07898.1|  370|Drosophila melanogaster nucleosome ass...    46   3e-05
BT001479-1|AAN71234.1|  370|Drosophila melanogaster LD21576p pro...    46   3e-05
AE013599-3725|AAF47097.1|  370|Drosophila melanogaster CG5330-PA...    46   3e-05

>AY058402-1|AAL13631.1|  375|Drosophila melanogaster GH17085p
           protein.
          Length = 375

 Score = 48.0 bits (109), Expect = 1e-05
 Identities = 17/33 (51%), Positives = 24/33 (72%)
 Frame = +3

Query: 504 PMIPNVKGIPDFWYNIFRNVSMLSEMXQEHDEP 602
           P+ P   G+P FW  +F+NV +LSE+ Q+HDEP
Sbjct: 170 PVSPTTLGVPRFWLTVFQNVPLLSELVQDHDEP 202


>AL109630-5|CAB65874.1|  375|Drosophila melanogaster EG:BACR7A4.18
           protein.
          Length = 375

 Score = 48.0 bits (109), Expect = 1e-05
 Identities = 17/33 (51%), Positives = 24/33 (72%)
 Frame = +3

Query: 504 PMIPNVKGIPDFWYNIFRNVSMLSEMXQEHDEP 602
           P+ P   G+P FW  +F+NV +LSE+ Q+HDEP
Sbjct: 170 PVSPTTLGVPRFWLTVFQNVPLLSELVQDHDEP 202


>AE014298-125|AAF45565.2|  375|Drosophila melanogaster CG3708-PA
           protein.
          Length = 375

 Score = 48.0 bits (109), Expect = 1e-05
 Identities = 17/33 (51%), Positives = 24/33 (72%)
 Frame = +3

Query: 504 PMIPNVKGIPDFWYNIFRNVSMLSEMXQEHDEP 602
           P+ P   G+P FW  +F+NV +LSE+ Q+HDEP
Sbjct: 170 PVSPTTLGVPRFWLTVFQNVPLLSELVQDHDEP 202


>U39553-1|AAB07898.1|  370|Drosophila melanogaster nucleosome
           assembly protein NAP-1 protein.
          Length = 370

 Score = 46.4 bits (105), Expect = 3e-05
 Identities = 17/29 (58%), Positives = 22/29 (75%)
 Frame = +3

Query: 516 NVKGIPDFWYNIFRNVSMLSEMXQEHDEP 602
           + KGIP FW  +FRN +++SEM Q HDEP
Sbjct: 142 DAKGIPGFWLTVFRNTAIMSEMVQPHDEP 170


>BT001479-1|AAN71234.1|  370|Drosophila melanogaster LD21576p
           protein.
          Length = 370

 Score = 46.4 bits (105), Expect = 3e-05
 Identities = 17/29 (58%), Positives = 22/29 (75%)
 Frame = +3

Query: 516 NVKGIPDFWYNIFRNVSMLSEMXQEHDEP 602
           + KGIP FW  +FRN +++SEM Q HDEP
Sbjct: 142 DAKGIPGFWLTVFRNTAIMSEMVQPHDEP 170


>AE013599-3725|AAF47097.1|  370|Drosophila melanogaster CG5330-PA
           protein.
          Length = 370

 Score = 46.4 bits (105), Expect = 3e-05
 Identities = 17/29 (58%), Positives = 22/29 (75%)
 Frame = +3

Query: 516 NVKGIPDFWYNIFRNVSMLSEMXQEHDEP 602
           + KGIP FW  +FRN +++SEM Q HDEP
Sbjct: 142 DAKGIPGFWLTVFRNTAIMSEMVQPHDEP 170


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,987,447
Number of Sequences: 53049
Number of extensions: 514072
Number of successful extensions: 1458
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1404
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1458
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2744900550
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)