Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0670
         (459 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_37277| Best HMM Match : Oxysterol_BP (HMM E-Value=0)                36   0.016
SB_48172| Best HMM Match : No HMM Matches (HMM E-Value=.)              32   0.20 
SB_17660| Best HMM Match : Meleagrin (HMM E-Value=5.9)                 27   5.6  
SB_321| Best HMM Match : No HMM Matches (HMM E-Value=.)                27   5.6  
SB_23483| Best HMM Match : Glyco_hydro_38C (HMM E-Value=0)             27   7.5  
SB_40313| Best HMM Match : Glyco_hydro_38 (HMM E-Value=0)              27   7.5  
SB_33804| Best HMM Match : Uteroglobin (HMM E-Value=1)                 27   7.5  

>SB_37277| Best HMM Match : Oxysterol_BP (HMM E-Value=0)
          Length = 926

 Score = 35.9 bits (79), Expect = 0.016
 Identities = 26/80 (32%), Positives = 37/80 (46%)
 Frame = +2

Query: 2   QQRWFAVDPETGVLSYYLYDGPGDTIQPGQPARGEAHLAAAVICPSDEDSKTFTINCASG 181
           Q+RWF +    G+LSYY      +  +     RG  +LA A I    ED+ +F I+    
Sbjct: 331 QRRWFVLS--NGLLSYYR-----NQAEMAHTCRGTINLAGAFI--DTEDACSFVISNGGT 381

Query: 182 DMLKLXATDARARQEWVDGL 241
            +  L A+    RQ WV  L
Sbjct: 382 QVFHLRASTEVERQRWVTAL 401


>SB_48172| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 547

 Score = 32.3 bits (70), Expect = 0.20
 Identities = 27/88 (30%), Positives = 41/88 (46%), Gaps = 8/88 (9%)
 Frame = +2

Query: 2   QQRWFAVDPETGVLSYYLYDGPGDTIQP------GQPARGEAHLAAAVICPSDEDSKTFT 163
           Q+RW  +  E G+LSY+LY G   T  P       Q A       + V+C +  ++    
Sbjct: 280 QRRWCVL--EGGMLSYWLYPGDETTKAPLGSLDLSQCASSHVTTVSRVLC-ARPNTMELV 336

Query: 164 INCASGDMLK-LXATDARA-RQEWVDGL 241
           IN    + +K L A D +A +  W+D L
Sbjct: 337 INKGDNNSIKYLLAADTKADKVTWLDSL 364


>SB_17660| Best HMM Match : Meleagrin (HMM E-Value=5.9)
          Length = 310

 Score = 27.5 bits (58), Expect = 5.6
 Identities = 13/32 (40%), Positives = 15/32 (46%)
 Frame = +1

Query: 70  RHNTAWTAGQGGGSFSCSSDMPKRRRLQDLHH 165
           RHN         GS  C  D P+RRR+   HH
Sbjct: 181 RHNNCSEYDVSYGSDECCHDHPERRRVGCSHH 212


>SB_321| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 496

 Score = 27.5 bits (58), Expect = 5.6
 Identities = 10/20 (50%), Positives = 15/20 (75%)
 Frame = +2

Query: 2  QQRWFAVDPETGVLSYYLYD 61
          Q+RWF ++   GVL Y++YD
Sbjct: 21 QRRWFVLN-SAGVLEYFIYD 39


>SB_23483| Best HMM Match : Glyco_hydro_38C (HMM E-Value=0)
          Length = 965

 Score = 27.1 bits (57), Expect = 7.5
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = +2

Query: 92  PARGEAHLAAAVICPSDEDSKTFTIN 169
           P     +L     CPS EDSK+F +N
Sbjct: 410 PVFSSCNLLNVSSCPSTEDSKSFVVN 435


>SB_40313| Best HMM Match : Glyco_hydro_38 (HMM E-Value=0)
          Length = 887

 Score = 27.1 bits (57), Expect = 7.5
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = +2

Query: 92  PARGEAHLAAAVICPSDEDSKTFTIN 169
           P     +L     CPS EDSK+F +N
Sbjct: 398 PVFSSCNLLNVSSCPSTEDSKSFVVN 423


>SB_33804| Best HMM Match : Uteroglobin (HMM E-Value=1)
          Length = 514

 Score = 27.1 bits (57), Expect = 7.5
 Identities = 13/32 (40%), Positives = 17/32 (53%)
 Frame = +2

Query: 86  GQPARGEAHLAAAVICPSDEDSKTFTINCASG 181
           GQ   G++HL  A+     E  KT  I C+SG
Sbjct: 23  GQAGTGKSHLVKAIFGKLKELGKTTKILCSSG 54


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,182,346
Number of Sequences: 59808
Number of extensions: 203853
Number of successful extensions: 494
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 465
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 493
length of database: 16,821,457
effective HSP length: 76
effective length of database: 12,276,049
effective search space used: 932979724
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)